Gene
| Gene Model ID | habu1_s313_g01516 |
|---|---|
| Locus | habu1_scaffold313 : 1727074 ... 1758003 : - |
| To GenomeBrowser | habu1_scaffold313:1727074..1758003 |
| Genes list of scaffold | habu1_scaffold313 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| wd repeat-containing protein 43 | GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s313_g01516.t3 | 2 | 1 | WD40 | 137 | 174 | 2.5e-24 | 84.2 | 3.0e-12 | 1.1e-08 | 34.5 |
| habu1_s313_g01516.t3 | 2 | 2 | WD40 | 179 | 214 | 2.5e-24 | 84.2 | 2.6e-09 | 9.7e-06 | 25.2 |
| habu1_s313_g01516.t3 | 1 | 1 | Utp12 | 494 | 598 | 7.8e-21 | 74.0 | 4.1e-24 | 1.5e-20 | 73.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s313_g01516.t3 | gi|57530361|ref|NP_001006396.1| | WD repeat-containing protein 43 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.1 |
| Venom grand-1 | 15.4 |
| Pit, infrared sensing | 16.6 |
| Nose | 13.8 |
| Brain-1 | 10.1 |
| Eye | 13.1 |
| fetal fibroblast | 34.5 |
| venom gland-2 | 24.7 |
| Brain-2 | 8.8 |
| Spleen | 17.9 |
| Lung | 15.9 |
| Liver | 17.7 |
| Kidney | 17.0 |
| Pancreas | 36.6 |
| Small intestine | 19.5 |
| Large intestine | 13.0 |
| Stomach | 15.8 |
| heart | 13.2 |
| ovary | 85.7 |
| cheek muscle | 20.9 |
Transcript
| Transcript ID | habu1_s313_g01516.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01516.t1 tgcctgctgggagcagagagggccgggcctgcagcgagcgacatggcggcagcaggaggaggaggaggaggagaaggcgc ttcggcgggcgagcgggagcaggcggcggccttcgagagccccatctacgtgacaggaagcccctgtgccttttctcccc acgagcggcgcttgttggccctctccgggccagacgggcggcttcgcgtgtgggagacggccagcagccgcctccaccac gagtacgtcccctctgcccacctcagcgccgcttgtacctgcctggcctgggcaccgccgggcgtcggaggaggccgacc gcctcccagcaaggaaggtcctcaaaggaagaagaggaaatctgaagttgtagaaacagctgaacagttagatcttttgg ctattggtactgctgttggcgggattttattatacagcacagtgaaaggagaattacagagtaaactaaatgggcatgac agtaaaataaactgcatacggtggcatcaggacaatggttgtttatatagctgttcagatgacaaacatattgtggaatg gaatgggcagacatgtaaagtgaagtgtaaatggaaaggagataacagcagtgtgagctcattgtgcatcagtccagatg gaaaagtactactttcagcaggtcgaactatcaaactgtgggacttggagaccaaagaagtctatagacatttcacagga catgctacagcagtttcagtgcttaagttcatcacaatgtggcctccagctgaaaatcaaccgtttgatggaattacagg cctctatttcttatctggagcaatgcatgaccggttactcagtgtgtggcaggtgagatcaggcaggaaagaaaagaatg ctgtaatgagtttcacagtaacagatgaaccaatccacatggacttgacaatatcagaaagcaaagaacagccagtgaag atagcagtggtatgcagggatggacagctgcatttatttgagcaagttttgaatggctattgcaaaaagcccttggcatc caaatgtacaatccagatagcaactcccggagaaggaaatgattccacaccaaagccagtccctatcctagcagctgcat tttgttcagataaagaatcattgctacttgtatatgggaattccttacatcctgttattgagaaagtgactttgaatact acagaaagacacatctgctttgtaagggacattcagaagactctgaccctgaaaacagaaatggctgtaacaaaggtgaa aactcctgtaatcaactcagaggtcaaaacattagtgcctgggattcctggtcatagttcagctgtgaaatcttcagtat gcagggataaaaataaaaggaagacagatggcaaagaggagagtattgaagatcgccttagtgctatggatattgatgtg atgaaagtaaaacaaccatcgggaagccttccacagactgataattttgcagtgcttttggttcagggtttggaaagcag tgatcctgtgattttaaataaagtgcttcaaaccaagaaggaagcagtaataaagaaaacagtagccagaattcctgtat attctgttattccacttctgcatgagctcacaagaaggctacaagggcatccatacagtgcttcacaaatggttcgatgg ttaaaacctgttctaactatgcatgcctcctacctttcaacgctgccagatctggcctcccagcttggaacattatacga gttaatggaaagcagagtaaaaactttgcaaaagctgtctcgcttgcatggcaaactatatcttattatcacccaagtgg ctgcattagaacaggttcaggatgtgcctgatattgatcagactgcaaaactggtatatgaagaagaatcatcggacgat ggttcagacgacgagatggttgcagagagagattcagatgaaaattgggatgaagatgaagagaaggaagatgaggagaa caatgagagagatgaacagtcggacaatgagcaagagatggcaatagaaaaagaaatcaatggagagtcagatttggatc cagaaaatgaaagtgaagaagaatagcatactgtttaaagaaagaaagcttgttggagccgactaccaaaatgtgtcact tctggattgccatgctggaagccacttggatcacaacaaggagtgcacacttgatacctaatatatctgatggcatattg gaaaactctgtttccaaacctggagtgcataatgatgccatccttcttgttcttcagttctatatttctagggatcacag tgaaacaaatttcttccacatagcaagcaaattatttcttttatttggatattcattttacagctcaagtctaatagctt atcaatccccattgggtgatgatcctgttgcagctttgctttaaattctgatggattgaagaccactctatcttaaactg ctttagttaaattttttggaagaaaataaatatttttgtaagactcaaaaac |
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| Transcript ID | habu1_s313_g01516.t2 |
| Definition | - |
>habu1_s313_g01516.t2 tgcctgctgggagcagagagggccgggcctgcagcgagcgacatggcggcagcaggaggaggaggaggaggagaaggcgc ttcggcgggcgagcgggagcaggcggcggccttcgagagccccatctacgtgacaggaagcccctgtgccttttctcccc acgagcggcgcttgttggccctctccgggccagacgggcggcttcgcgtgtgggagacggccagcagccgcctccaccac gagtacgtcccctctgcccacctcagcgccgcttgtacctgcctggcctgggcaccgccgggcgtcggaggaggccgacc gcctcccagcaaggaaggtcctcaaaggaagaagaggaaatctgaagttgtagaaacagctgaacagttagatcttttgg ctattggtactgctgttggcgggattttattatacagcacagtgaaaggagaattacagagtaaactaaatgggcatgac agtaaaataaactgcatacggtggcatcaggacaatggttgtttatatagctgttcagatgacaaacatattgtggaatg gaatgggcagacatgtaaagtgaagtgtaaatggaaaggagataacagcagtgtgagctcattgtgcatcagtccagatg gaaaagtactactttcagcaggtcgaactatcaaactgtgggacttggagaccaaagaagtctatagacatttcacagga catgctacagcagtttcagtgcttaagttcatcacaatgtggcctccagctgaaaatcaaccgtttgatggaattacagg cctctatttcttatctggagcaatgcatgaccggttactcagtgtgtggcaggtgagatcaggcaggaaagaaaagaatg ctgtaatgagtttcacagtaacagatgaaccaatccacatggacttgacaatatcagaaagcaaagaacagccagtgaag atagcagtggtatgcagggatggacagctgcatttatttgagcaagttttgaatggctattgcaaaaagcccttggcatc caaatgtacaatccagatagcaactcccggagaaggaaatgattccacaccaaagccagtccctatcctagcagctgcat tttgttcagataaagaatcattgctacttgtatatgggaattccttacatcctgttattgagaaagtgactttgaatact acagaaagacacatctgctttgtaagggacattcagaagactctgaccctgaaaacagaaatggctgtaacaaaggtgaa aactcctgtaatcaactcagaggtcaaaacattagtgcctgggattcctggtcatagttcagctgtgaaatcttcagtat gcagggataaaaataaaaggaagacagatggcaaagagtggaaggagaacagtagagagagtattgaagatcgccttagt gctatggatattgatgtgatgaaagtaaaacaaccatcgggaagccttccacagactgataattttgcagtgcttttggt tcagggtttggaaagcagtgatcctgtgattttaaataaagtgcttcaaaccaagaaggaagcagtaataaagaaaacag tagccagaattcctgtatattctgttattccacttctgcatgagctcacaagaaggctacaagggcatccatacagtgct tcacaaatggttcgatggttaaaacctgttctaactatgcatgcctcctacctttcaacgctgccagatctggcctccca gcttggaacattatacgagttaatggaaagcagagtaaaaactttgcaaaagctgtctcgcttgcatggcaaactatatc ttattatcacccaagtggctgcattagaacaggttcaggatgtgcctgatattgatcagactgcaaaactggtatatgaa gaagaatcatcggacgatggttcagacgacgagatggttgcagagagagattcagatgaaaattgggatgaagatgaaga gaaggaagatgaggagaacaatgagagagatgaacagtcggacaatgagcaagagatggcaatagaaaaagaaatcaatg gagagtcagatttggatccagaaaatgaaagtgaagaagaatagcatactgtttaaagaaagaaagcttgttggagccga ctaccaaaatgtgtcacttctggattgccatgctggaagccacttggatcacaacaaggagtgcacacttgatacctaat atatctgatggcatattggaaaactctgtttccaaacctggagtgcataatgatgccatccttcttgttcttcagttcta tatttctagggatcacagtgaaacaaatttcttccacatagcaagcaaattatttcttttatttggatattcattttaca gctcaagtctaatagcttatcaatccccattgggtgatgatcctgttgcagctttgctttaaattctgatggattgaaga ccactctatcttaaactgctttagttaaattttttggaagaaaataaatatttttgtaagactcaaaaac |
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| Transcript ID | habu1_s313_g01516.t3 |
| Definition | - |
>habu1_s313_g01516.t3 tgcctgctgggagcagagagggccgggcctgcagcgagcgacatggcggcagcaggaggaggaggaggaggagaaggcgc ttcggcgggcgagcgggagcaggcggcggccttcgagagccccatctacgtgacaggaagcccctgtgccttttctcccc acgagcggcgcttgttggccctctccgggccagacgggcggcttcgcgtgtgggagacggccagcagccgcctccaccac gagtacgtcccctctgcccacctcagcgccgcttgtacctgcctggcctgggcaccgccgggcgtcggaggaggccgacc gcctcccagcaaggaaggtcctcaaaggaagaagaggaaatctgaagttgtagaaacagctgaacagttagatcttttgg ctattggtactgctgttggcgggattttattatacagcacagtgaaaggagaattacagagtaaactaaatgggcatgac agtaaaataaactgcatacggtggcatcaggacaatggttgtttatatagctgttcagatgacaaacatattgtggaatg gaatgggcagacatgtaaagtgaagtgtaaatggaaaggagataacagcagtgtgagctcattgtgcatcagtccagatg gaaaagtactactttcagcaggtcgaactatcaaactgtgggacttggagaccaaagaagtctatagacatttcacagga catgctacagcagtttcagtgcttaagttcatcacaatgtggcctccagctgaaaatcaaccgtttgatggaattacagg cctctatttcttatctggagcaatgcatgaccggttactcagtgtgtggcaggtgagatcaggcaggaaagaaaagaatg ctgtaatgagtttcacagtaacagatgaaccaatccacatggacttgacaatatcagaaagcaaagaacagccagtgaag atagcagtggtatgcagggatggacagctgcatttatttgagcaagttttgaatggctattgcaaaaagcccttggcatc caaatgtacaatccagatagcaactcccggagaaggaaatgattccacaccaaagccagtccctatcctagcagctgcat tttgttcagataaagaatcattgctacttgtatatgggaattccttacatcctgttattgagaaagtgactttgaatact acagaaagacacatctgctttgtaagggacattcagaagactctgaccctgaaaacagaaatggctgtaacaaaggtgaa aactcctgtaatcaactcagaggtcaaaacattagtgcctgggattcctggtcatagttcagctgtgaaatcttcagtat gcagggataaaaataaaaggaagacagatggcaaagaggagagtattgaagatcgccttagtgctatggatattgatgtg atgaaagtaaaacaaccatcgggaagccttccacagactgataattttgcagtgcttttggttcagggtttggaaagcag tgatcctgtgattttaaataaagtgcttcaaaccaagaaggaagcagtaataaagaaaacagtagccagaattcctgtat attctgttattccacttctgcatgagctcacaagaaggctacaagggcatccatacagtgcttcacaaatggttcgatgg ttaaaacctgttctaactatgcatgcctcctacctttcaacgctgccagatctggcctcccagcttggaacattatacga gttaatggaaagcagagtaaaaactttgcaaaagctgtctcgcttgcatggcaaactatatcttattatcacccaagtgg ctgcattagaacaggttcaggatgtgcctgatattgatcagactgcaaaactggtatatgaagaaggaaacatcagcagc actgatgtagctaaccttgcagatattgttgactctgaacttcccctagcacagcagtcacgtgatcatttgggcacaac tgaatcatcggacgatggttcagacgacgagatggttgcagagagagattcagatgaaaattgggatgaagatgaagaga aggaagatgaggagaacaatgagagagatgaacagtcggacaatgagcaagagatggcaatagaaaaagaaatcaatgga gagtcagatttggatccagaaaatgaaagtgaagaagaatagcatactgtttaaagaaagaaagcttgttggagccgact accaaaatgtgtcacttctggattgccatgctggaagccacttggatcacaacaaggagtgcacacttgatacctaatat atctgatggcatattggaaaactctgtttccaaacctggagtgcataatgatgccatccttcttgttcttcagttctata tttctagggatcacagtgaaacaaatttcttccacatagcaagcaaattatttcttttatttggatattcattttacagc tcaagtctaatagcttatcaatccccattgggtgatgatcctgttgcagctttgctttaaattctgatggattgaagacc actctatcttaaactgctttagttaaattttttggaagaaaataaatatttttgtaagactcaaaaac |
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Protein
| Protein ID | habu1_s313_g01516.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01516.t1 MAAAGGGGGGEGASAGEREQAAAFESPIYVTGSPCAFSPHERRLLALSGPDGRLRVWETASSRLHHEYVPSAHLSAACTC LAWAPPGVGGGRPPPSKEGPQRKKRKSEVVETAEQLDLLAIGTAVGGILLYSTVKGELQSKLNGHDSKINCIRWHQDNGC LYSCSDDKHIVEWNGQTCKVKCKWKGDNSSVSSLCISPDGKVLLSAGRTIKLWDLETKEVYRHFTGHATAVSVLKFITMW PPAENQPFDGITGLYFLSGAMHDRLLSVWQVRSGRKEKNAVMSFTVTDEPIHMDLTISESKEQPVKIAVVCRDGQLHLFE QVLNGYCKKPLASKCTIQIATPGEGNDSTPKPVPILAAAFCSDKESLLLVYGNSLHPVIEKVTLNTTERHICFVRDIQKT LTLKTEMAVTKVKTPVINSEVKTLVPGIPGHSSAVKSSVCRDKNKRKTDGKEESIEDRLSAMDIDVMKVKQPSGSLPQTD NFAVLLVQGLESSDPVILNKVLQTKKEAVIKKTVARIPVYSVIPLLHELTRRLQGHPYSASQMVRWLKPVLTMHASYLST LPDLASQLGTLYELMESRVKTLQKLSRLHGKLYLIITQVAALEQVQDVPDIDQTAKLVYEEESSDDGSDDEMVAERDSDE NWDEDEEKEDEENNERDEQSDNEQEMAIEKEINGESDLDPENESEEE |
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| Protein ID | habu1_s313_g01516.t2 |
| Definition | - |
>habu1_s313_g01516.t2 MAAAGGGGGGEGASAGEREQAAAFESPIYVTGSPCAFSPHERRLLALSGPDGRLRVWETASSRLHHEYVPSAHLSAACTC LAWAPPGVGGGRPPPSKEGPQRKKRKSEVVETAEQLDLLAIGTAVGGILLYSTVKGELQSKLNGHDSKINCIRWHQDNGC LYSCSDDKHIVEWNGQTCKVKCKWKGDNSSVSSLCISPDGKVLLSAGRTIKLWDLETKEVYRHFTGHATAVSVLKFITMW PPAENQPFDGITGLYFLSGAMHDRLLSVWQVRSGRKEKNAVMSFTVTDEPIHMDLTISESKEQPVKIAVVCRDGQLHLFE QVLNGYCKKPLASKCTIQIATPGEGNDSTPKPVPILAAAFCSDKESLLLVYGNSLHPVIEKVTLNTTERHICFVRDIQKT LTLKTEMAVTKVKTPVINSEVKTLVPGIPGHSSAVKSSVCRDKNKRKTDGKEWKENSRESIEDRLSAMDIDVMKVKQPSG SLPQTDNFAVLLVQGLESSDPVILNKVLQTKKEAVIKKTVARIPVYSVIPLLHELTRRLQGHPYSASQMVRWLKPVLTMH ASYLSTLPDLASQLGTLYELMESRVKTLQKLSRLHGKLYLIITQVAALEQVQDVPDIDQTAKLVYEEESSDDGSDDEMVA ERDSDENWDEDEEKEDEENNERDEQSDNEQEMAIEKEINGESDLDPENESEEE |
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| Protein ID | habu1_s313_g01516.t3 |
| Definition | - |
>habu1_s313_g01516.t3 MAAAGGGGGGEGASAGEREQAAAFESPIYVTGSPCAFSPHERRLLALSGPDGRLRVWETASSRLHHEYVPSAHLSAACTC LAWAPPGVGGGRPPPSKEGPQRKKRKSEVVETAEQLDLLAIGTAVGGILLYSTVKGELQSKLNGHDSKINCIRWHQDNGC LYSCSDDKHIVEWNGQTCKVKCKWKGDNSSVSSLCISPDGKVLLSAGRTIKLWDLETKEVYRHFTGHATAVSVLKFITMW PPAENQPFDGITGLYFLSGAMHDRLLSVWQVRSGRKEKNAVMSFTVTDEPIHMDLTISESKEQPVKIAVVCRDGQLHLFE QVLNGYCKKPLASKCTIQIATPGEGNDSTPKPVPILAAAFCSDKESLLLVYGNSLHPVIEKVTLNTTERHICFVRDIQKT LTLKTEMAVTKVKTPVINSEVKTLVPGIPGHSSAVKSSVCRDKNKRKTDGKEESIEDRLSAMDIDVMKVKQPSGSLPQTD NFAVLLVQGLESSDPVILNKVLQTKKEAVIKKTVARIPVYSVIPLLHELTRRLQGHPYSASQMVRWLKPVLTMHASYLST LPDLASQLGTLYELMESRVKTLQKLSRLHGKLYLIITQVAALEQVQDVPDIDQTAKLVYEEGNISSTDVANLADIVDSEL PLAQQSRDHLGTTESSDDGSDDEMVAERDSDENWDEDEEKEDEENNERDEQSDNEQEMAIEKEINGESDLDPENESEEE |
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