Gene
| Gene Model ID | habu1_s313_g01518 |
|---|---|
| Locus | habu1_scaffold313 : 1782401 ... 1811502 : - |
| To GenomeBrowser | habu1_scaffold313:1782401..1811502 |
| Genes list of scaffold | habu1_scaffold313 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein phosphatase pp1-beta catalytic subunit | EC:3.1.3.53 GO:0000086 GO:0000164 GO:0005730 GO:0005925 GO:0005979 GO:0005981 GO:0006470 GO:0016459 GO:0017018 GO:0017023 GO:0019433 GO:0019901 GO:0030155 GO:0030512 GO:0032922 GO:0042587 GO:0043153 GO:0044281 GO:0046872 GO:0050115 GO:0051301 GO:0070062 GO:0070688 GO:0072357 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s313_g01518.t1 | 1 | 1 | Metallophos | 30 | 221 | 1.49939e-43 | 148.5 | 0.0 | 2.00386e-43 | 148.1 |
| habu1_s313_g01518.t1 | 1 | 1 | Spy1 | 426 | 484 | 1.8e-23 | 83.0 | 4.1e-27 | 3.0e-23 | 82.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s313_g01518.t1 | gi|591326005|ref|XP_007089000.1| | PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit [Panthera tigris altaica] | 0.0 |
| habu1_s313_g01518.t1 | gi|671015958|ref|XP_008698786.1| | PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit [Ursus maritimus] | 0.0 |
| habu1_s313_g01518.t1 | gi|685580727|ref|XP_009182180.1| | PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X2 [Papio anubis] | 0.0 |
| habu1_s313_g01518.t1 | gi|602651063|ref|XP_007431918.1| | PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X3 [Python bivittatus] | 0.0 |
| habu1_s313_g01518.t1 | gi|625184129|ref|XP_007649519.1| | PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 [Cricetulus griseus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 25.1 |
| Venom grand-1 | 18.8 |
| Pit, infrared sensing | 20.5 |
| Nose | 15.7 |
| Brain-1 | 22.3 |
| Eye | 23.7 |
| fetal fibroblast | 39.8 |
| venom gland-2 | 28.6 |
| Brain-2 | 25.0 |
| Spleen | 13.7 |
| Lung | 22.7 |
| Liver | 11.7 |
| Kidney | 18.2 |
| Pancreas | 16.0 |
| Small intestine | 10.3 |
| Large intestine | 14.9 |
| Stomach | 17.0 |
| heart | 26.4 |
| ovary | 44.0 |
| cheek muscle | 93.1 |
Transcript
| Transcript ID | habu1_s313_g01518.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01518.t1 gtcgcggcattaaaaaggttgagaaccactgatttaatcctttaagtaaaagaatatacatttttggttgtcatataaaa tagtgttaacgcagtttagaaaccaggatggggctgcagaagagatggctttccacctggctcttatttgtcctctgatt tgataatggagtaatctggcacagtgcgaggatgtcgccctggaaagattgtgcagatgacagaagctgaagttcggggt ttgtgtataaaatcacgagaaatttttcttagccagcccattctcttggagctagaggcaccactgaagatctgtggtga tattcatggccagtatacagatttacttcgattatttgaatatggaggatttccaccagaagctaactatctttttctgg gagattatgtggatagaggcaaacaatccttggaaactatctgcttgttacttgcatataaaataaaatatcctgagaat ttttttctcttgagaggaaatcatgagtgtgctagtataaatcgcatctatggattctatgatgaatgtaaacgacgatt taatatcaaactctggaagacatttacagactgctttaattgtctgcctattgcagcaatagtagatgagaagattttct gctgccacggaggattgtcaccagatctgcagtcaatggaacagatccgaagaattatgagacccacggatgttcctgac acaggcttactgtgtgatctgttatggtctgatcctgacaaggatgtgcaaggctggggcgaaaatgaccgtggagtttc ctttacttttggagctgatgtggtcagcaaattcttgaacagacatgatttggatttgatttgtcgagctcatcaggtgg ttgaagatggctatgaattctttgctaaacgacagctggttactctattttctgctcctaattactgtggagaatttgac aatgctggtggcatgatgagtgtggatgaaactttaatgtgttcttttcagattctgaaaccttctgaaaagaaagcaaa gtaccagtatggtggactgaactctggacgtccagtcactccacctcgcacagctaatccaccgaagaagagatcagggg tgtcaaactgccgacccatggaccggtttcatcataccggagccgcgcccaccccattgccggcaacggcaaaactccga tacgttgcgcgacatcacatgacgtcctttcggttacctagtggttcagttctattggcaggagatgaggtaacttcatt gaggaaaatgaaacataaccagagttactgtcgaacacctcccactattaccattcatttaaagccaaatgaatctaaat catatcagcaaaaaaagacacttgcccttaagcgccctaaatttaaagactgccgggagacctctgggaaaaacattaat cataatattaagccaaaacagtcaaaaggttcatgtctaattattcagcgtcaggaaatgacagctttctttaaactatt tgatgatgatttgatacaagatttcttgtggatggactgttgctgtaaaattgcagacaagtatcttttggcaatgactt ttgtttatttcaagagggctggctatagtataaacgaacacacccggcttaatttctttgttgctctgtaagtaactcta aactttatggttatgattaaagtgcaagatacagcatctatcatttgagagaagagtagttagaataaagccttgcttgc tccaacaaataaatatttatatttataaatttgcg |
|
Protein
| Protein ID | habu1_s313_g01518.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01518.t1 MTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLA YKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRI MRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSA PNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPRTANPPKKRSGVSNCRPMDRFHHTGAAPTP LPATAKLRYVARHHMTSFRLPSGSVLLAGDEVTSLRKMKHNQSYCRTPPTITIHLKPNESKSYQQKKTLALKRPKFKDCR ETSGKNINHNIKPKQSKGSCLIIQRQEMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAGYSINEHTRLNF FVAL |
|