Gene
| Gene Model ID | habu1_s313_g01525 |
|---|---|
| Locus | habu1_scaffold313 : 2248972 ... 2305779 : + |
| To GenomeBrowser | habu1_scaffold313:2248972..2305779 |
| Genes list of scaffold | habu1_scaffold313 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribokinase isoform x4 | EC:2.7.1.15 GO:0004747 GO:0006014 GO:0006098 GO:0046835 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s313_g01525.t3 | 1 | 1 | PfkB | 1 | 242 | 0.0 | 163.1 | 0.0 | 0.0 | 162.9 |
| habu1_s313_g01525.t3 | 1 | 1 | Phos_pyr_kin | 111 | 214 | 2.0e-07 | 30.4 | 1.1e-10 | 3.3e-07 | 29.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s313_g01525.t3 | gi|591354996|ref|XP_007071808.1| | PREDICTED: ribokinase [Chelonia mydas] | 0.0 |
| habu1_s313_g01525.t3 | gi|530591858|ref|XP_005289573.1| | PREDICTED: ribokinase isoform X4 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.9 |
| Venom grand-1 | 5.7 |
| Pit, infrared sensing | 4.6 |
| Nose | 5.4 |
| Brain-1 | 2.8 |
| Eye | 3.7 |
| fetal fibroblast | 7.6 |
| venom gland-2 | 4.4 |
| Brain-2 | 2.6 |
| Spleen | 2.8 |
| Lung | 3.8 |
| Liver | 6.8 |
| Kidney | 19.2 |
| Pancreas | 0.7 |
| Small intestine | 7.1 |
| Large intestine | 6.2 |
| Stomach | 6.5 |
| heart | 8.5 |
| ovary | 22.8 |
| cheek muscle | 8.2 |
Transcript
| Transcript ID | habu1_s313_g01525.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01525.t1 tagcgtgaaaacctgttacaaagattcgtcaggcatttcaaaggggtagcctactagatccgtgaaggaccccgcaggta aagcggggttggataaactggaagttcgataataggcagataatgttgagggcggctggaggagaggcaggttaaagatc acgttgtggagaaaaagtttcttgtagtggctccttgctcgcttctcagcatggtagttgcagaaatcgtggtggtggga tcctgtatgactgatctagtgagccttactaaacgtttacccaaagttggagaaaccatacatgggtataaatttttcac tggatttggggggaaaggtgccaaccaatgtatccaggcagttcggcttggggctaaaacctcaatgatctgcaaggttg ggaaggattcttttggtaatgactacattgaaaactttaaaaaaaatgggattccaacagaatttgtaagtcagacagaa gatgctgcaactggagctgcttcaatcatggtcaatagtgaaggagaaaactttattgtaattgttgcgggagcgaattt acttctgaattccagtgatttaaaaagggctgctcatgtcatcgctgaagccaaagttatggtctgccaacttgaaataa ccccagcaatttctttagaagcattaaaaatggctcatagcaatggagtgaagactttatttaatcctgctccagcaatt gctgacctagactcacaattttacacttattctgacatcatctgctgcaatgaaagcgagggagctggtgacagttttgt cggagcactagcattctacctggctcactaccccaatctacctctacatgaaatgctgaggagaagtaacttcatagcat ccattagcactgaaacaactgggacacagacttcctacccttacagaaaggatctgccacaaaacctattttaagctgtg taaaacatttgatttttctctgctcaaacttttaaacaaatgccaactacacggatgccaaaatgaaaattgtataaatt gcatgtttttgcttagccttatcctgaatgaggtgtatatggtgtcacacactgcaattccagtttaggatacagcattt cagctgatacagtaagattatttccatgtcttggtcacttaagcaaggacccttttattactgtatgttttaaaattgta atcctacttcgagaataaattttttgcacaatttggaaagt |
|
| Transcript ID | habu1_s313_g01525.t2 |
| Definition | - |
>habu1_s313_g01525.t2 tagcgtgaaaacctgttacaaagattcgtcaggcatttcaaaggggtagcctactagatccgtgaaggaccccgcaggta aagcggggttggataaactggaagttcgataataggcagataatgttgagggcggctggaggagaggcaggttaaagatc acgttgtggagaaaaagtttcttgtagtggctccttgctcgcttctcagcatggtagttgcagaaatcgtggtggtggga tcctgtatgactgatctagtgagccttactaaacgtttacccaaagttggagaaaccatacatgggtataaatttttcac tggatttggggggaaaggtgccaaccaatgtatccaggcagttcggcttggggctaaaacctcaatgatctgcaaggttg ggaaggattcttttggtaatgactacattgaaaactttaaaaaaaatgggattccaacagaatttgtaagtcagacagaa gatgctgcaactggagctgcttcaatcatggtcaatagtgaaggagaaaactttattgtaattgttgcgggagcgaattt acttctgaattccagtgatttaaaaagggctgctcatgtcatcgctgaagccaaagttatggtctgccaacttgaaataa ccccagcaatttctttagaagcattaaaaatggctcatagcaatggagtgaagactttatttaatcctgctccagcaatt gctgacctagactcacaattttacacttattctgacatcatctgctgcaatgaaagcgaggcagaaattctaacaggaat tgcagttggtaatgctggagatgctggacaagtcggaactaaattgttagagagaggctgtaggactgtcgtcgtaactt tgggaccagagggttgtgtgatagtctccaaagaggaaccaaccccaaatcatattcctgtcaggaagatctctgctgtg gatactacgggagctggtgacagttttgtcggagcactagcattctacctggctcactaccccaatctacctctacatga aatgctgaggagaagtaacttcatagcatccattagcactgaaacaactgggacacagacttcctacccttacagaaagg atctgccacaaaacctattttaagctgtgtaaaacatttgatttttctctgctcaaacttttaaacaaatgccaactaca cggatgccaaaatgaaaattgtataaattgcatgtttttgcttagccttatcctgaatgaggtgtatatggtgtcacaca ctgcaattccagtttaggatacagcatttcagctgatacagtaagattatttccatgtcttggtcacttaagcaaggacc cttttattactgtatgttttaaaattgtaatcctacttcgagaataaattttttgcacaatttggaaagt |
|
| Transcript ID | habu1_s313_g01525.t3 |
| Definition | - |
>habu1_s313_g01525.t3 ggcggtgggagacatataaacatggaggccatctttcacaagaggccttactaaacgtttacccaaagttggagaaacca tacatgggtataaatttttcactggatttggggggaaaggtgccaaccaatgtatccaggcagttcggcttggggctaaa acctcaatgatctgcaaggttgggaaggattcttttggtaatgactacattgaaaactttaaaaaaaatgggattccaac agaatttgtaagtcagacagaagatgctgcaactggagctgcttcaatcatggtcaatagtgaaggagaaaactttattg taattgttgcgggagcgaatttacttctgaattccagtgatttaaaaagggctgctcatgtcatcgctgaagccaaagtt atggtctgccaacttgaaataaccccagcaatttctttagaagcattaaaaatggctcatagcaatggagtgaagacttt atttaatcctgctccagcaattgctgacctagactcacaattttacacttattctgacatcatctgctgcaatgaaagcg aggcagaaattctaacaggaattgcagttggtaatgctggagatgctggacaagtcggaactaaattgttagagagaggc tgtaggactgtcgtcgtaactttgggaccagagggttgtgtgatagtctccaaagaggaaccaaccccaaatcatattcc tgtcaggaagatctctgctgtggatactacgggagctggtgacagttttgtcggagcactagcattctacctggctcact accccaatctacctctacatgaaatgctgaggagaagtaacttcatagcatccattagcactgaaacaactgggacacag acttcctacccttacagaaaggatctgccacaaaacctattttaagctgtgtaaaacatttgatttttctctgctcaaac ttttaaacaaatgccaactacacggatgccaaaatgaaaattgtataaattgcatgtttttgcttagccttatcctgaat gaggtgtatatggtgtcacacactgcaattccagtttaggatacagcatttcagctgatacagtaagattatttccatgt cttggtcacttaagcaaggacccttttattactgtatgttttaaaattgtaatcctacttcgagaataaattttttgcac aatttggaaagt |
|
Protein
| Protein ID | habu1_s313_g01525.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01525.t1 MVVAEIVVVGSCMTDLVSLTKRLPKVGETIHGYKFFTGFGGKGANQCIQAVRLGAKTSMICKVGKDSFGNDYIENFKKNG IPTEFVSQTEDAATGAASIMVNSEGENFIVIVAGANLLLNSSDLKRAAHVIAEAKVMVCQLEITPAISLEALKMAHSNGV KTLFNPAPAIADLDSQFYTYSDIICCNESEGAGDSFVGALAFYLAHYPNLPLHEMLRRSNFIASISTETTGTQTSYPYRK DLPQNLF |
|
| Protein ID | habu1_s313_g01525.t2 |
| Definition | - |
>habu1_s313_g01525.t2 MVVAEIVVVGSCMTDLVSLTKRLPKVGETIHGYKFFTGFGGKGANQCIQAVRLGAKTSMICKVGKDSFGNDYIENFKKNG IPTEFVSQTEDAATGAASIMVNSEGENFIVIVAGANLLLNSSDLKRAAHVIAEAKVMVCQLEITPAISLEALKMAHSNGV KTLFNPAPAIADLDSQFYTYSDIICCNESEAEILTGIAVGNAGDAGQVGTKLLERGCRTVVVTLGPEGCVIVSKEEPTPN HIPVRKISAVDTTGAGDSFVGALAFYLAHYPNLPLHEMLRRSNFIASISTETTGTQTSYPYRKDLPQNLF |
|
| Protein ID | habu1_s313_g01525.t3 |
| Definition | - |
>habu1_s313_g01525.t3 MICKVGKDSFGNDYIENFKKNGIPTEFVSQTEDAATGAASIMVNSEGENFIVIVAGANLLLNSSDLKRAAHVIAEAKVMV CQLEITPAISLEALKMAHSNGVKTLFNPAPAIADLDSQFYTYSDIICCNESEAEILTGIAVGNAGDAGQVGTKLLERGCR TVVVTLGPEGCVIVSKEEPTPNHIPVRKISAVDTTGAGDSFVGALAFYLAHYPNLPLHEMLRRSNFIASISTETTGTQTS YPYRKDLPQNLF |
|