Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s313_g01527
Locus habu1_scaffold313 : 2338042 ... 2430963 : +
To GenomeBrowser habu1_scaffold313:2338042..2430963
Genes list of scaffold habu1_scaffold313

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s313_g01527.t2 gi|669293557|ref|XP_008639949.1| PREDICTED: uncharacterized protein LOC103622737 [Corvus brachyrhynchos] 0.0
habu1_s313_g01527.t2 gi|697822430|ref|XP_009647595.1| PREDICTED: uncharacterized protein LOC104135630 [Egretta garzetta] 0.0
habu1_s313_g01527.t2 gi|694862809|ref|XP_009473336.1| PREDICTED: uncharacterized protein LOC104021497 [Nipponia nippon] 0.0
habu1_s313_g01527.t2 gi|690435562|ref|XP_009319176.1| PREDICTED: uncharacterized protein LOC103914289 isoform X1 [Pygoscelis adeliae] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 5.7
Venom grand-1 5.9
Pit, infrared sensing 4.4
Nose 4.0
Brain-1 4.6
Eye 6.8
fetal fibroblast 4.4
venom gland-2 10.5
Brain-2 2.7
Spleen 3.7
Lung 4.9
Liver 0.5
Kidney 11.7
Pancreas 0.7
Small intestine 1.6
Large intestine 2.6
Stomach 2.7
heart 8.0
ovary 8.2
cheek muscle 16.7

Transcript
Transcript IDhabu1_s313_g01527.t1
Definition-
>habu1_s313_g01527.t1
ggaaacacgttttttttttttcccccctgcggctcgcgtgcgacaccttggctggcggaatcagttaattcttttcaaga
ttggaaacaatcctctgtggcagagatacagcccatgactcacaaaggctgagtcattaccgtgaagcaggacgcaagtg
ctacacttcagccgtgacagaaaatgcaggaccaagatattacaatggcgtttggactggacaaatgtgccatgctcaac
agggggaaaatagtgaaaactgaaggaatcaagatgtcttgtggaaataacatcaagagtctcgatgaagatgactacta
cagatatctgggcatccttcaagctgacgacatcaagcacactgaaaccaagaaaaagtggaacttagcgttagctaaga
agccagcaggcatcatgtacaatcggggtgcgatttccccctggcacccccgctcgctgggagacctcaagaagggagag
caggtctgcaggcgaagaaatcagatttcctacacaccaagtgatgaggaagacagtgatgattctgagggagagaacca
ggaacttgctcagattgacagagagagaagacggaattgcaccttgactcccttggcaaccaatcaacagcaaaatcaag
aaaatcagtgctgcaaagtgcgggcccattttccttctgggctggatcaccatagctctgaagaagagttggaatgtatc
acccgtgaatttgctgctgagaaacggaagtggtctcaggtcagcaggtttggctgctgcagtgacagctgtaatacctc
ctccagtgatgaggaagtaaagaccttgtgtggcaaatccttccgaccagtggtcgaagctgtggagggtttgcgtgcca
gtaccagcccagtgctcttcagtgcctcacctcctaagagactgcagtccttggtacggaccacatcatcccggcctata
atttttacaagcgttggaggcagctttgagcaaggcatgccatgtaaacgacaccgacagggctatggtgacaaagtcgg
gagacccagtctcgatctggaaaaaatgcagcaaaagatgctgtttaagaagaattgtggcacaaagacaaggatcatca
aaattcgccatatcaacagcagtcggccctcaccccactttgtgtatgatccatcgatttttgccttccaatccctgagc
accttgaagcctttgagcccaatagctccagttgaagaaccatcatgtgcctactgaacaatgtactcaaaagtctcagg
aatcatcatatcaaccagctgcccaagggacatggagggcacatatctgcaataggttccaggatccttggtatcaggag
attggtgtcttgactcttgtctgttttacatgccattataatttctgaagattgtcagaaaggaaatgtatgtgcatcaa
ccaagctaggcacataaattgcgatgcaactatcaagatactattgattcacagaaggctggtttcttataaatggagtg
agcatattacccttataactgatcttcagtgagtggtagcatttagccaaccttgacttatttcagaagctaaactgggt
aaggcctggttaatatgtagaaccacctgggcagttcaaagctgttagctggattggtaaacaggaaagaaatcccagtc
cacagtaggggaaggacatcacaaaccaattccataacattgccaagaaaatagcatggatgcagtcctaggacttgagc
tcagcttgagagcatcttcacaatatattataaatgagcaactgcccatgtgctaaaaccccagcagtaagcagctttct
tgtactttatctaagagaattattccttgtatgtaggaatgttcagtacattaggatttatccaggaattggaaggatct
ctgcttttagtatgagtctgaaagactagaaacatacgatcttcatctcccagggtaggtaaacttatttggttttgtgc
catcaagttataaggtagagcaagaagcttactgagctgtgcagcaactgaattgctttgaaattagtagagtatgaagt
taaagagacaactgtatattttgttcagcacaaatagaattagagctctacagagtcttaggatatacagtaactggata
gatatttgcaggtagaagaataaatgagaagttataatttcctttg
Transcript IDhabu1_s313_g01527.t2
Definition-
>habu1_s313_g01527.t2
ggaaacacgttttttttttttcccccctgcggctcgcgtgcgacaccttggctggcggaatcagttaattcttttcaaga
ttggaaacaatcctctgtggcagagatacagcccatgactcacaaaggctgagtcattaccgtgaagcaggacgcaagtg
ctacacttcagccgtgacagaaaatgcaggaccaagatattacaatggcgtttggactggacaaatgtgccatgctcaac
agggggaaaatagtgaaaactgaaggaatcaagatgtcttgtggaaataacatcaagagtctcgatgaagatgactacta
cagatatctgggcatccttcaagctgacgacatcaagcacactgaaaccaagaaaaagatcgtatgccactcgagctaca
agttgggtgtacctgcagttgctcagtgcgactgcacgccctttagatgcgagcacgtccttaactcttccctggctcct
tggatttgtaccatgctcaagatccttacgaagaagctcaggaatcaaagtttgaatgagattcagcccttccagttgaa
gatttcctacacaccaagtgatgaggaagacagtgatgattctgagggagagaaccaggaacttgctcagattgacagag
agagaagacggaattgcaccttgactcccttggcaaccaatcaacagcaaaatcaagaaaatcagtgctgcaaagtgcgg
gcccattttccttctgggctggatcaccatagctctgaagaagagttggaatgtatcacccgtgaatttgctgctgagaa
acggaagtggtctcaggtcagcaggtttggctgctgcagtgacagctgtaatacctcctccagtgatgaggaagtaaaga
ccttgtgtggcaaatccttccgaccagtggtcgaagctgtggagggtttgcgtgccagtaccagcccagtgctcttcagt
gcctcacctcctaagagactgcagtccttggtacggaccacatcatcccggcctataatttttacaagcgttggaggcag
ctttgagcaaggcatgccatgtaaacgacaccgacagggctatggtgacaaagtcgggagacccagtctcgatctggaaa
aaatgcagcaaaagatgctgtttaagaagaattgtggcacaaagacaaggatcatcaaaattcgccatatcaacagcagt
cggccctcaccccactttgtgtatgatccatcgatttttgccttccaatccctgagcaccttgaagcctttgagcccaat
agctccagttgaagaaccatcatgtgcctactgaacaatgtactcaaaagtctcaggaatcatcatatcaaccagctgcc
caagggacatggagggcacatatctgcaataggttccaggatccttggtatcaggagattggtgtcttgactcttgtctg
ttttacatgccattataatttctgaagattgtcagaaaggaaatgtatgtgcatcaaccaagctaggcacataaattgcg
atgcaactatcaagatactattgattcacagaaggctggtttcttataaatggagtgagcatattacccttataactgat
cttcagtgagtggtagcatttagccaaccttgacttatttcagaagctaaactgggtaaggcctggttaatatgtagaac
cacctgggcagttcaaagctgttagctggattggtaaacaggaaagaaatcccagtccacagtaggggaaggacatcaca
aaccaattccataacattgccaagaaaatagcatggatgcagtcctaggacttgagctcagcttgagagcatcttcacaa
tatattataaatgagcaactgcccatgtgctaaaaccccagcagtaagcagctttcttgtactttatctaagagaattat
tccttgtatgtaggaatgttcagtacattaggatttatccaggaattggaaggatctctgcttttagtatgagtctgaaa
gactagaaacatacgatcttcatctcccagggtaggtaaacttatttggttttgtgccatcaagttataaggtagagcaa
gaagcttactgagctgtgcagcaactgaattgctttgaaattagtagagtatgaagttaaagagacaactgtatattttg
ttcagcacaaatagaattagagctctacagagtcttaggatatacagtaactggatagatatttgcaggtagaagaataa
atgagaagttataatttcctttg

Protein
Protein IDhabu1_s313_g01527.t1
Definition-
>habu1_s313_g01527.t1
MQDQDITMAFGLDKCAMLNRGKIVKTEGIKMSCGNNIKSLDEDDYYRYLGILQADDIKHTETKKKWNLALAKKPAGIMYN
RGAISPWHPRSLGDLKKGEQVCRRRNQISYTPSDEEDSDDSEGENQELAQIDRERRRNCTLTPLATNQQQNQENQCCKVR
AHFPSGLDHHSSEEELECITREFAAEKRKWSQVSRFGCCSDSCNTSSSDEEVKTLCGKSFRPVVEAVEGLRASTSPVLFS
ASPPKRLQSLVRTTSSRPIIFTSVGGSFEQGMPCKRHRQGYGDKVGRPSLDLEKMQQKMLFKKNCGTKTRIIKIRHINSS
RPSPHFVYDPSIFAFQSLSTLKPLSPIAPVEEPSCAY
Protein IDhabu1_s313_g01527.t2
Definition-
>habu1_s313_g01527.t2
MQDQDITMAFGLDKCAMLNRGKIVKTEGIKMSCGNNIKSLDEDDYYRYLGILQADDIKHTETKKKIVCHSSYKLGVPAVA
QCDCTPFRCEHVLNSSLAPWICTMLKILTKKLRNQSLNEIQPFQLKISYTPSDEEDSDDSEGENQELAQIDRERRRNCTL
TPLATNQQQNQENQCCKVRAHFPSGLDHHSSEEELECITREFAAEKRKWSQVSRFGCCSDSCNTSSSDEEVKTLCGKSFR
PVVEAVEGLRASTSPVLFSASPPKRLQSLVRTTSSRPIIFTSVGGSFEQGMPCKRHRQGYGDKVGRPSLDLEKMQQKMLF
KKNCGTKTRIIKIRHINSSRPSPHFVYDPSIFAFQSLSTLKPLSPIAPVEEPSCAY

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