Gene
| Gene Model ID | habu1_s3214_g11138 |
|---|---|
| Locus | habu1_scaffold3214 : 53219 ... 61095 : - |
| To GenomeBrowser | habu1_scaffold3214:53219..61095 |
| Genes list of scaffold | habu1_scaffold3214 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein c20orf24 homolog | GO:0005739 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3214_g11138.t1 | 1 | 1 | Rab5ip | 52 | 132 | 8.6e-28 | 96.2 | 3.1e-31 | 1.1e-27 | 95.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3214_g11138.t1 | gi|602648523|ref|XP_007430677.1| | PREDICTED: uncharacterized protein C20orf24 homolog [Python bivittatus] | 0.0 |
| habu1_s3214_g11138.t1 | gi|530607507|ref|XP_005295436.1| | PREDICTED: uncharacterized protein C20orf24 homolog isoform X3 [Chrysemys picta bellii] | 0.0 |
| habu1_s3214_g11138.t1 | gi|119331102|ref|NP_001073205.1| | uncharacterized protein C20orf24 homolog [Gallus gallus] | 0.0 |
| habu1_s3214_g11138.t1 | gi|542177287|ref|XP_005495313.1| | PREDICTED: uncharacterized protein C20orf24 homolog isoform X2 [Zonotrichia albicollis] | 0.0 |
| habu1_s3214_g11138.t1 | gi|564255439|ref|XP_006266693.1| | PREDICTED: uncharacterized protein C20orf24 homolog isoform X1 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 24.4 |
| Venom grand-1 | 26.1 |
| Pit, infrared sensing | 22.1 |
| Nose | 25.4 |
| Brain-1 | 12.7 |
| Eye | 21.2 |
| fetal fibroblast | 64.7 |
| venom gland-2 | 31.7 |
| Brain-2 | 13.4 |
| Spleen | 13.4 |
| Lung | 14.9 |
| Liver | 30.1 |
| Kidney | 26.6 |
| Pancreas | 22.6 |
| Small intestine | 26.9 |
| Large intestine | 18.1 |
| Stomach | 26.1 |
| heart | 18.6 |
| ovary | 100.6 |
| cheek muscle | 101.9 |
Transcript
| Transcript ID | habu1_s3214_g11138.t1 |
|---|---|
| Definition | - |
>habu1_s3214_g11138.t1 accggggcgcgctgagcttgaggggtggcgcgggggggggggacgatgagcggcggtcgacggaaggaggagccgtcgtc gcacccgcactcgcagcagcacctagtggccaacggtgggggcggagtgttgcgggcctcgttgtggagcaaagccttgc ggagcgactccgcctgggaagacaaggatgaatttttagatgtcatttactggttccggcagatcattgctgttattttg ggagtgatctggggaattgttccactgaagggatttgtgggtatagcaatattctgtctcataaatgctggagtcctata cctctattttagcagttttcagcaaatagatgaagaggagtatggcggaacatgggaactaacaaaggaaggcttcatga catcttttgctttgtttttggttgtttggataatcttctacactgccatccattatgattgacaaactcagccaaattaa ttgtcttaactgaagaacactttaagaacccctttggcctatggagaggtagaataagccgggttttatatccatggtcc aaggagacgcaacatgtcttatggattctaagaagaaaagtttgatcagtcttattttaaaaagctgttgcttttccaga acttaaaaaaagccattacaatgctttgcagacagcacaagacttttcaacctttcagccttcttggtgactttaaccag tatggcgatgacaaatctttatatcctaaaagggtgattctgttaattaacttgcgtcgattatcttgttctctttgaga tctattcagattgtgacttgtcttccatttgtaagacatactaaaatggtagccatcatgaagcatatggcaggaggatt ctgctgaatgtattgtagaacatagattttgatggttctcagcttcttttgaggaaattaaagctctgatctgattgtat taag |
|
Protein
| Protein ID | habu1_s3214_g11138.t1 |
|---|---|
| Definition | - |
>habu1_s3214_g11138.t1 MSGGRRKEEPSSHPHSQQHLVANGGGGVLRASLWSKALRSDSAWEDKDEFLDVIYWFRQIIAVILGVIWGIVPLKGFVGI AIFCLINAGVLYLYFSSFQQIDEEEYGGTWELTKEGFMTSFALFLVVWIIFYTAIHYD |
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