Gene
| Gene Model ID | habu1_s3214_g11139 |
|---|---|
| Locus | habu1_scaffold3214 : 61236 ... 83912 : + |
| To GenomeBrowser | habu1_scaffold3214:61236..83912 |
| Genes list of scaffold | habu1_scaffold3214 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| myosin regulatory light polypeptide partial | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3214_g11139.t2 | 2 | 1 | EF-hand_1 | 97 | 125 | 3.6e-15 | 54.0 | 1.1e-10 | 8.1e-08 | 31.0 |
| habu1_s3214_g11139.t2 | 2 | 1 | EF-hand_6 | 97 | 126 | 1.4e-12 | 46.3 | 1.4e-10 | 1.0e-07 | 31.2 |
| habu1_s3214_g11139.t2 | 2 | 1 | EF-hand_7 | 99 | 182 | 8.3e-13 | 48.2 | 1.3e-11 | 9.0e-09 | 35.3 |
| habu1_s3214_g11139.t2 | 2 | 2 | EF-hand_1 | 167 | 194 | 3.6e-15 | 54.0 | 8.8e-06 | 0.0062 | 15.7 |
| habu1_s3214_g11139.t2 | 2 | 2 | EF-hand_7 | 167 | 226 | 8.3e-13 | 48.2 | 1.2e-07 | 8.3e-05 | 22.6 |
| habu1_s3214_g11139.t2 | 2 | 2 | EF-hand_6 | 167 | 193 | 1.4e-12 | 46.3 | 6.1e-06 | 0.0043 | 16.8 |
| habu1_s3214_g11139.t2 | 1 | 1 | EF-hand_8 | 179 | 228 | 9.4e-10 | 37.9 | 1.8e-08 | 1.2e-05 | 24.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3214_g11139.t2 | gi|602662040|ref|XP_007436666.1| | PREDICTED: myosin regulatory light polypeptide 9 [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 22.9 |
| Venom grand-1 | 20.1 |
| Pit, infrared sensing | 31.0 |
| Nose | 15.3 |
| Brain-1 | 11.2 |
| Eye | 17.4 |
| fetal fibroblast | 291.5 |
| venom gland-2 | 13.7 |
| Brain-2 | 4.2 |
| Spleen | 61.4 |
| Lung | 260.5 |
| Liver | 21.0 |
| Kidney | 88.7 |
| Pancreas | 13.4 |
| Small intestine | 109.4 |
| Large intestine | 490.5 |
| Stomach | 528.3 |
| heart | 487.7 |
| ovary | 36.5 |
| cheek muscle | 24.6 |
Transcript
| Transcript ID | habu1_s3214_g11139.t1 |
|---|---|
| Definition | - |
>habu1_s3214_g11139.t1 aagcgcttgccggatggagcggagctgttgggatgttcttcagtcacgtttgggagcaatattcggggacgggagggggc aatgtaaatgtcaagtctgcaacgcggtctgccagtgctacacctgcagctggtagtcgtgcagcactttttcatgcggc tgctgataaaaacaggatcgccaacatgatcgccaacgtctgataacggatatggcaaaagaagaagaagaagaagaaga agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag aagctaacaaacaaaaacgcttcctagatctgagggctttaaacagtttctgtctgaaccagtttggaaagaggaaacat ctagacaatggtagattacaagcatcatgccctaaagcatcattcaaacttcagtgttgtttgaacacacagaactgtgt aagatgtagtttcatatcgtatgtatggtatggtgctgctagcttgatgtgcagagtgcttcattctgttgattatagaa gcatcttttgggccaacaaaaacgccatcaaaatgtctagcaagcgagccaaggcaaagaccaccaagaagcgccctcag cgtgccacctccaacgtctttgccatgttcgaccaatcccagatccaggagttcaaggaggcttttaatatgattgacca aaaccgtgatggattcattgacaaagaggatctacatgacatgctggcttctctagggaaaaatcctacagatgagtact tggaaggaatgatgagtgaagcacctggacccatcaatttcactatgttcctcactatgtttggggagaagctgaatggc acagatccagaagatgtcattcgaaatgcttttgcctgctttgatgaggaagccacaggcttcattcatgaagatcaatt gcgtgaactgcttaccaccatgggtgatcgttttacagatgaggaagtagatgagatgtatcgagaagctccaattgata agaaaggcaactttaactatgtggagttcacccgtatcctgaagcatggagccagagacaaagatgattaaaactaagag agatttaaatttccagttatccttgtttgtcccagtcttcttgttcctccctgagattctttgatgccctgggtcaagta cagaatgggttacactctgaaatatttcagaactattcctattcttaatgaagaataagcttttccatgtctgagtcaca tggatcaatttgactcattattaagccacctgttgatttgataggtcccttggagtaaaatatttgcaatattcccttta t |
|
| Transcript ID | habu1_s3214_g11139.t2 |
| Definition | - |
>habu1_s3214_g11139.t2 aagcgcttgccggatggagcggagctgttgggatgttcttcagtcacgtttgggagcaatattcggggacgggagggggc aatgtaaatgtcaagtctgcaacgcggtctgccagtgctacacctgcagctggtagtcgtgcagcactttttcatgcggc tgctgataaaaacaggatcgccaacatgatcgccaacgtctgataacggatatggcaaaagaagaagaagaagaagaaga agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag aagctaacaaacaaaaacgcttcctagatctgagggctttaaacagtttctgtctgaaccaggccaacaaaaacgccatc aaaatgtctagcaagcgagccaaggcaaagaccaccaagaagcgccctcagcgtgccacctccaacgtctttgccatgtt cgaccaatcccagatccaggagttcaaggaggcttttaatatgattgaccaaaaccgtgatggattcattgacaaagagg atctacatgacatgctggcttctctagggaaaaatcctacagatgagtacttggaaggaatgatgagtgaagcacctgga cccatcaatttcactatgttcctcactatgtttggggagaagctgaatggcacagatccagaagatgtcattcgaaatgc ttttgcctgctttgatgaggaagccacaggcttcattcatgaagatcaattgcgtgaactgcttaccaccatgggtgatc gttttacagatgaggaagtagatgagatgtatcgagaagctccaattgataagaaaggcaactttaactatgtggagttc acccgtatcctgaagcatggagccagagacaaagatgattaaaactaagagagatttaaatttccagttatccttgtttg tcccagtcttcttgttcctccctgagattctttgatgccctgggtcaagtacagaatgggttacactctgaaatatttca gaactattcctattcttaatgaagaataagcttttccatgtctgagtcacatggatcaatttgactcattattaagccac ctgttgatttgataggtcccttggagtaaaatatttgcaatattccctttat |
|
Protein
| Protein ID | habu1_s3214_g11139.t1 |
|---|---|
| Definition | - |
>habu1_s3214_g11139.t1 MAKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEANKQKRFLDLRALNSFCLNQFGKRKHLDNGRLQASCPKASFKL QCCLNTQNCVRCSFISYVWYGAASLMCRVLHSVDYRSIFWANKNAIKMSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQE FKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEE ATGFIHEDQLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGARDKDD |
|
| Protein ID | habu1_s3214_g11139.t2 |
| Definition | - |
>habu1_s3214_g11139.t2 MAKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEANKQKRFLDLRALNSFCLNQANKNAIKMSSKRAKAKTTKKRPQ RATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNG TDPEDVIRNAFACFDEEATGFIHEDQLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGARDKDD |
|