Gene
| Gene Model ID | habu1_s3214_g11141 |
|---|---|
| Locus | habu1_scaffold3214 : 86746 ... 123245 : + |
| To GenomeBrowser | habu1_scaffold3214:86746..123245 |
| Genes list of scaffold | habu1_scaffold3214 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox protein tgif2 isoform x2 | GO:0000122 GO:0003677 GO:0005634 GO:0010470 GO:0038092 GO:0045666 GO:0060041 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3214_g11141.t2 | 1 | 1 | Homeobox | 41 | 97 | 1.9e-06 | 27.3 | 7.3e-10 | 3.6e-06 | 26.4 |
| habu1_s3214_g11141.t2 | 1 | 1 | Homeobox_KN | 58 | 97 | 2.5e-16 | 59.0 | 1.2e-19 | 5.9e-16 | 57.8 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.1 |
| Venom grand-1 | 1.7 |
| Pit, infrared sensing | 3.5 |
| Nose | 3.0 |
| Brain-1 | 0.8 |
| Eye | 1.7 |
| fetal fibroblast | 3.7 |
| venom gland-2 | 0.9 |
| Brain-2 | 0.8 |
| Spleen | 2.4 |
| Lung | 3.1 |
| Liver | 0.6 |
| Kidney | 2.1 |
| Pancreas | 1.1 |
| Small intestine | 0.8 |
| Large intestine | 2.1 |
| Stomach | 2.3 |
| heart | 3.2 |
| ovary | 28.3 |
| cheek muscle | 0.9 |
Transcript
| Transcript ID | habu1_s3214_g11141.t1 |
|---|---|
| Definition | - |
>habu1_s3214_g11141.t1 gccattgctggcaatggggtgggcgcggctctggtatgatgaaaccggcccgcgggccagcagtttgacacccctgatct tgtgtttatgttttaccatgtccatccacctcctcctagcattcactaaaaagatgaggaaaaaaacatattattaacaa aaggttgtgggtggagagtaacctcctttgaaagaaaatcaggggatactttattatgttaaaaacatgaagattagagt gctgcaaataatgtttgtaaattacagtgtatatcctgcctacagggctacccagttttatcagatgcttaaaacacggc tgactgggaattctgggagttgaagcccacatgtcttaaaggtgagaaacaataagctaaaatgcagttaactagttttt ggcttgctgtgtccctggaaccttacccagcatatggttatcagaaatagcaatttacaggaacatacctggatttacct cagagttcagttgcaatttgctgaccatgaatggatagagactgcagcaatagcggaatatctgaaaatcaaggtttgaa ccaagacaaatctgccaacagttccacaatgtctgacagtgactttggggaagatgatgggagcatttctcaggacccat cccagcctggcaagaggaaacgaaggggcaatctccccaaagagtctgtcaagatcctgcgggaatggctgtatgaacat cggttcaatgcgtacccttcagagcaagagaaactcagtctttccgggcaaacaagcctctctgttctacaaatttgcaa ttggttcatcaatgccaggcgcagacttctccctgacatgctgctaaaggatggcaaagacccaaaccagttcactattt ctcgccgaggcaccaaagccagtgatgtagcactttcccgtggagctgctgcaggttctggactcttgatggtgcctcct cctcctgctgctgcagccactacatccaaggtcctctccatgtctgtgtgcccccctgtgatctgccagacttctcggcc actggctggcaacttgactgtgatgaccggcgacctagagaaacgatccatgctccaacggattgaactggaatcccata ccaagcagtcacagctgagtgcaacaggcaacacgctggctcttctcacccgggcagatgcatccagtcccaccagtgga ctcttcaacacgcctcctccaacaccacctgagctttttggagaggacttcagcagcttccagttgctggtagaagtggc tctgcaaagagcagctgagcttgactcacagaagctgagtgggcaactgcctccatcaccacagagagaatcttctcctg caaaaaacaaaatgggaccagtgtgattaaaataatacacaggatatctaatgggctgtagaaagtgcctaagcagatct gaaactttagtataaaagaaaatttaaaatccagttcctgcaatgcgctgctctttgatatactgctgtactttgtccta atgatgcaaagatattgtttcaggtgggatgggaactttgcaagagagaaaatattcttttgcttgaactttatggagca gaactactgtaaataacttttgaattttttttaatcaataaagtttttttaaaaagataccatg |
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| Transcript ID | habu1_s3214_g11141.t2 |
| Definition | - |
>habu1_s3214_g11141.t2 gggagtgggaagaagcgcaagaaagaaaatgaaaccgtcgaggaaaagtttgaaccaagacaaatctgccaacagttcca caatgtctgacagtgactttggggaagatgatgggagcatttctcaggacccatcccagcctggcaagaggaaacgaagg ggcaatctccccaaagagtctgtcaagatcctgcgggaatggctgtatgaacatcggttcaatgcgtacccttcagagca agagaaactcagtctttccgggcaaacaagcctctctgttctacaaatttgcaattggttcatcaatgccaggcgcagac ttctccctgacatgctgctaaaggatggcaaagacccaaaccagttcactatttctcgccgaggcaccaaagccagtgat gtagcactttcccgtggagctgctgcaggttctggactcttgatggtgcctcctcctcctgctgctgcagccactacatc caaggtcctctccatgtctgtgtgcccccctgtgatctgccagacttctcggccactggctggcaacttgactgtgatga ccggcgacctagagaaacgatccatgctccaacggattgaactggaatcccataccaagcagtcacagctgagtgcaaca ggcaacacgctggctcttctcacccgggcagatgcatccagtcccaccagtggactcttcaacacgcctcctccaacacc acctgagctttttggagaggacttcagcagcttccagttgctggtagaagtggctctgcaaagagcagctgagcttgact cacagaagctgagtgggcaactgcctccatcaccacagagagaatcttctcctgcaaaaaacaagtaacttcctgcagcc tctggtttcctctcggaggcaaccctttcttttttccagaatttcttttctgttggcttttgcagcgagagctcccatta gaagttaatgctgtgatacggtctcttgtcaaaccgggaaccgtcatggtggaagcctccattctcctttatgctgccag ctgaccttggaaacaaggcacccccaactttatataaacatttccctcaaaggagggcacacactacttcatcctttggg ttggcatcaggctaagaagccagtcggcatatctctgaagccgcctggaggagatggtctattcaggggttcctggctcc tgttcttggaagggccccaaacttgaacatcttctgagaagatgtagttgctggttgatgtttttataacgcttgattct tttaaaaaaaaaaaaattgtggaggatttagacaacacttcttaccttcttcccacccctcccttctctcccagattttc aaagcttactgacatggactaggacgagaaaacagtccaaagcagtttatcagaaacaaatacttttttttctttttgat aactgaagacaagcaaagagctatttcaccacccttggcttttttttttttatacagaacatacttttaattttaatttt cttggaggggacagggaaatgtttctgttcccctctcattttcttttaaagttgtaccatgttgtagcatattgttgaac tggtgtgaatatgtggctggtccttacatcacacctggtgggagtctcccataacgaacaaatgagttggcagcctttaa agattgtggcattctttctgttggacaggaagagcagatgagcatcaccttgtgaatactggtgccagtaaaagaaacaa aagcatatggtgctttagatgatctactttaggtgctggcagaaatttagctggtttctttgataacagagcattcttct gtctactccttccatttgtcctgataagtacaacactagaagagagagaggactatgctggcagaagggtagccataaac catggagagggcattaaatcaaaggtgtggaagaaactaaaaacaaatttttcaaatgtgaagttgctttaaacaacgct ttctcctttttaattttggacatgaactgtatctctgtgtgactttgggaaacttgcagcatctctgacagatgcgctga caaaactacctatacaaatcaacaagaattcattctgacttgggtatttttgtatccttgctttcatcatgctgaatgta gttgctcctttgctgatggagcaagggtgccctctcatggccaagaagggaagtcaagcagatcagggcttccattctac aggcaattctgaatatcgctcccatgtgatgttcatgtgttccatatgtctatagtctcgatggacccaataatagtttt attattcaaaattagagaaaaggggtacactttggatttaggtggagggaaatcaaggcttgtctgttgatcgtttagaa gacagaccagtaagaatgcattcatcttttcatatcctcttttgccctgagttcaagacctcgcacaagaatggcatacc ctgggtggtagaatcatccacctcttttttgaatagtgctgtttcactgtaaatgtaagttaaatagtgatctattatat acacctatatatctatcttgagaaacactaattttagagggtgttagcctaattattatgttgcatgaatagtaaagata aagcccagcagaatacaactttttctcagatatctttgaatcaggcctagaagctggtggttgatttcatggtagatttt gagaggagaataaagggtttgtaggaaaattagagcccaagtgggaggccttacggcttctaccaatattgagtgccttc cccctcaaccttctccccttcccctggaaagtgctactacgagaattagtataaacccagaattgctgctggacatagcc ttgtccattcccttctctttttggtgctctttgacccttaatcccatgtcattgatgggatgtagcgaactgtgcctaga gagttgccatttcaatccaaagtcatcttcaaaataacccaaaggtgcttctgttaaaaagcccacaaaaagccttggaa aaagcttaagctgttcatttattgctattttgtttgagggcattcatcagtcttgtatccagttttcatcctaaattgag ttctggatggtgaacatatcagtcttttgatctttttttttaaatccctttaaaaggaaaccactcaaggttttctagaa tgtgcagcaacatttcatttttttactgcttggaattgggcattattttagtgtactattgaaatggaaattccttgaac agatgtatcccaggtccctcttatacacttttggctagtaacctacttgactttaatggtacatatatcactgatttcct ttagaatgggaccagtgtgattaaaataatacacaggatatctaatgggctgtagaaagtgcctaagcagatctgaaact ttagtataaaagaaaatttaaaatccagttcctgcaatgcgctgctctttgatatactgctgtactttgtcctaatgatg caaagatattgtttcaggtgggatgggaactttgcaagagagaaaatattcttttgcttgaactttatggagcagaacta ctgtaaataacttttgaattttttttaatcaataaagtttttttaaaaagataccatg |
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Protein
| Protein ID | habu1_s3214_g11141.t1 |
|---|---|
| Definition | - |
>habu1_s3214_g11141.t1 MDRDCSNSGISENQGLNQDKSANSSTMSDSDFGEDDGSISQDPSQPGKRKRRGNLPKESVKILREWLYEHRFNAYPSEQE KLSLSGQTSLSVLQICNWFINARRRLLPDMLLKDGKDPNQFTISRRGTKASDVALSRGAAAGSGLLMVPPPPAAAATTSK VLSMSVCPPVICQTSRPLAGNLTVMTGDLEKRSMLQRIELESHTKQSQLSATGNTLALLTRADASSPTSGLFNTPPPTPP ELFGEDFSSFQLLVEVALQRAAELDSQKLSGQLPPSPQRESSPAKNKMGPV |
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| Protein ID | habu1_s3214_g11141.t2 |
| Definition | - |
>habu1_s3214_g11141.t2 MKPSRKSLNQDKSANSSTMSDSDFGEDDGSISQDPSQPGKRKRRGNLPKESVKILREWLYEHRFNAYPSEQEKLSLSGQT SLSVLQICNWFINARRRLLPDMLLKDGKDPNQFTISRRGTKASDVALSRGAAAGSGLLMVPPPPAAAATTSKVLSMSVCP PVICQTSRPLAGNLTVMTGDLEKRSMLQRIELESHTKQSQLSATGNTLALLTRADASSPTSGLFNTPPPTPPELFGEDFS SFQLLVEVALQRAAELDSQKLSGQLPPSPQRESSPAKNK |
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