Gene
| Gene Model ID | habu1_s3258_g11211 |
|---|---|
| Locus | habu1_scaffold3258 : 28046 ... 83769 : + |
| To GenomeBrowser | habu1_scaffold3258:28046..83769 |
| Genes list of scaffold | habu1_scaffold3258 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vm3ha_profl ame: full=zinc metalloproteinase disintegrin-like hr1a ame: full=snake venom metalloproteinase short=svmp contains: ame: full=disintegrin-like 1a flags: precursor | EC:3.4.24.0 GO:0004222 GO:0005576 GO:0006508 GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3258_g11211.t2 | 2 | 1 | Pep_M12B_propep | 68 | 121 | 4.3e-25 | 87.9 | 4.7e-19 | 4.1e-16 | 58.9 |
| habu1_s3258_g11211.t2 | 2 | 1 | Reprolysin | 170 | 366 | 0.0 | 468.0 | 0.0 | 0.0 | 261.0 |
| habu1_s3258_g11211.t2 | 2 | 1 | Reprolysin_4 | 170 | 348 | 1.8e-32 | 112.5 | 6.1e-20 | 5.4e-17 | 62.0 |
| habu1_s3258_g11211.t2 | 2 | 1 | Reprolysin_5 | 172 | 343 | 1.1e-39 | 136.3 | 4.8e-25 | 4.2e-22 | 79.0 |
| habu1_s3258_g11211.t2 | 2 | 1 | Reprolysin_2 | 191 | 349 | 1.1e-28 | 100.4 | 1.0e-16 | 8.8e-14 | 51.9 |
| habu1_s3258_g11211.t2 | 2 | 1 | Reprolysin_3 | 196 | 317 | 3.8e-38 | 130.8 | 1.1e-18 | 9.7e-16 | 58.4 |
| habu1_s3258_g11211.t2 | 1 | 1 | Peptidase_M10 | 240 | 320 | 2.1e-07 | 30.7 | 8.1e-06 | 0.007 | 16.0 |
| habu1_s3258_g11211.t2 | 1 | 1 | Disintegrin | 383 | 457 | 1.3e-22 | 79.8 | 1.4e-25 | 1.3e-22 | 79.8 |
| habu1_s3258_g11211.t2 | 1 | 1 | ADAM_CR | 460 | 540 | 2.0e-25 | 89.0 | 2.3e-28 | 2.0e-25 | 89.0 |
| habu1_s3258_g11211.t2 | 2 | 2 | Pep_M12B_propep | 573 | 599 | 4.3e-25 | 87.9 | 2.9e-09 | 2.5e-06 | 27.2 |
| habu1_s3258_g11211.t2 | 2 | 2 | Reprolysin | 617 | 789 | 0.0 | 468.0 | 0.0 | 0.0 | 209.4 |
| habu1_s3258_g11211.t2 | 2 | 2 | Reprolysin_5 | 622 | 774 | 1.1e-39 | 136.3 | 4.9e-22 | 4.3e-19 | 69.2 |
| habu1_s3258_g11211.t2 | 2 | 2 | Reprolysin_4 | 622 | 763 | 1.8e-32 | 112.5 | 1.2e-16 | 1.1e-13 | 51.2 |
| habu1_s3258_g11211.t2 | 2 | 2 | Reprolysin_2 | 632 | 787 | 1.1e-28 | 100.4 | 1.1e-15 | 9.8e-13 | 48.5 |
| habu1_s3258_g11211.t2 | 2 | 2 | Reprolysin_3 | 635 | 757 | 3.8e-38 | 130.8 | 2.7e-22 | 2.4e-19 | 70.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 1840.8 |
| Pit, infrared sensing | 2.0 |
| Nose | 0.1 |
| Brain-1 | 0.1 |
| Eye | 0.2 |
| fetal fibroblast | 1.1 |
| venom gland-2 | 3821.6 |
| Brain-2 | 0.1 |
| Spleen | 0.2 |
| Lung | 0.1 |
| Liver | 0.2 |
| Kidney | 0.1 |
| Pancreas | 0.2 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 0.1 |
| ovary | 0.1 |
| cheek muscle | 5.7 |
Transcript
| Transcript ID | habu1_s3258_g11211.t1 |
|---|---|
| Definition | - |
>habu1_s3258_g11211.t1 ctgcccttgtagtagaacctcaggaatcaacggtgagctggatgaatgggaatgtggaggtccctggaaacggaacagcg gatgagtcggtccgggggtgtggctaggaactccagggacagcctgaactggatgaggggtccatgcctcgtctaccttg ggaacctccagcgcatcattaagatcagaggagggagctctataatcctgggatctgggaacgtgaatgattatgaagta gtgtatccacgaaaagtcactgcagtgcccaaaggagcagttcagccaaaggatcactgctattatcatggacgcatcca gaatgatgctgactcaactgcaagcatcagtgcatgcaatggtttgaaaggacatttcaagcttcaaggggagatgtacc ttattgaacctttgaggttttctgacagtgaagcccatgcagtcttcaaatatgaaaatgtagaaaaagaggatgaggcc cccaaaatgtgtggggtaacccaaactaattgggaatcagatgagcccatcaaaaaggcctctaagttagttgttactgc tgaacaacaaagatacttgaacaacttcagattcattgagcttgtcatagttgcggactacagaatgttcacgaaattca acagcaatttaaatgaggtaaaaacatgggtatatgaaattgtcaacactttaaatgagatttacagatatttgtacgtt cgtgtagcactggttgccctagaagtttggtccaacggagatttgagtagcgtcacgttatcagcatatgatactttgga ctcatttggagaatggagaaaaagagatttgctgaagcgcaaaagtcatgataatgctcagttactcacggccattgact tcaatggaacaattataggattggctcacgtggccagcatgtgtgacccgaagtgttctaccggaattgttcaggattat agctcaagaaatcttgtggttgcagttataatggcccatgaaatgggtcataatctgggcattcgtcatgacagagaaaa ctgtacttgtcatgctaactcatgcattatgtctgccgtgataagtgatcaaccttccaaatatttcagcaattgtagtc atgtgcaatattggaactatattaatgatgatgaaccacaatgcattctcaatgaacccttgagaacagatattgtttca cctccagtttgtggaaatgaacttttggaggtgggagaagaatgtgactgtggctctcctgcaacttgtcgatatccgtg ctgtgatgctgcaacatgtaaactacactcatgggtagagtgtgaatctggagagtgttgtgagcaatgcagatttagga cagcaggaacagaatgccgggcaagaaggagtgagtgtgacattgctgaaagctgcactggccattctgctgactgtccc acagatcgcttccataggaatggacaaccatgcctacacaacttcggttactgctacaatggcaattgccccatcatgta tcaccaatgttatgctctctggggggcaaatgcaactgtggctaaagattcatgttttgaggataaccagaaaggcaatg attatggctattgcagaaaggaaaacggtagaaagattccatgtgaaccacaagatgtaaaatgtggcaggttatactgc tcacttggaaaccagcttccttgccgtttcttctatacacccacagatgaaaatattgggatggttgatactggaacaaa atgtggagataaaaaggtctgcagcaacaggcagtgtgttgatgatcactgctattatcatggacgcatccagaatgatg ctgactcaactgcaagcatcagtgcatgcaatggtttgaattcacgaaatacaatggcgattcagataagagaacgagta catcaaatggtcaacactatgagggaattcaagaaatacaccagcaattcaactgctataaaaacaagaatatatgcatg tgtcaacactttaaatctgattttcagagctttcaatatttatatagcactgattggcctagaaatttggtccaacaaag atttgattaacgtgcagtcagcatcaaaagttactctggacttatttggaaactggagagagacagtcttgctgaaccgc acaagacatgataatgctcagttactcacggggattgactttgatggagcaactgtaggattggcttacgtgggcaccat gtgtgacccgaagcgttctgtaggaattgttcaggatcataacaaactagatgttatggttgcaatcgcaatggcccatg agctgggtcataatctgggcattaatcatgacggaaatcagtgtaattgcggtggtaacccatgcatcatgtctgcgacg ctaaactttgagcctgtctatcggttcagcgattgtagtcgggacgaacattgaaagtatcttattgataagaggcctcc gtgcattctcaacatacccgtgagaacagatattgtttcacctccagtttgtggaaattactttgtggaggtgggagaag aatgtgactgtggccttcctgcagtaagtttttttttttaatcaacaagagtaattcaaagaactttctcaaaaatagga atccttgcaaaaccatctggtttctaagtgtttgagctatccaaggggttggtttgtgaatggcatagatttgtgtcctt tttctacatgcatgtatgaagggtttcttggatttggttaaccagttgtagaggaatggagaattggtacttcactccca gccggcatattttttttaaaaatgggtgactgaccactccaagaaaatccttccctactgaaaacccctattttgttgat atggccacattatctgtcccactattttcttgagctgcttcctcccagaatttgtgatctttaatctatataatgttttt tataagaacagtaatttagtaaagtgttctctttatattttaaaa |
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| Transcript ID | habu1_s3258_g11211.t2 |
| Definition | - |
>habu1_s3258_g11211.t2 tggaaccttcctcaactgggaggccagcatggctaggatttttgtaaataccctgggcgcagacgaaagaccgaagggga gggccctgtactgaaagtgtctgcccttgtagtagaacctcaggaatcaacggtccctggaaacggaacagcggatgagt cggtccgggggtgtggctaggaactccagggacagcctgaactggatgaggggtccatgcctcgtctaccttgggaacct ccagcgcatcattaagatcagaggagggagctctataatcctgggatctgggaacgtgaatgattatgaagtagtgtatc cacgaaaagtcactgcagtgcccaaaggagcagttcagccaaaggatcactgctattatcatggacgcatccagaatgat gctgactcaactgcaagcatcagtgcatgcaatggtttgaaaggacatttcaagcttcaaggggagatgtaccttattga acctttgaggttttctgacagtgaagcccatgcagtcttcaaatatgaaaatgtagaaaaagaggatgaggcccccaaaa tgtgtggggtaacccaaactaattgggaatcagatgagcccatcaaaaaggcctctaagttagttgttactgctgaacaa caaagatacttgaacaacttcagattcattgagcttgtcatagttgcggactacagaatgttcacgaaattcaacagcaa tttaaatgaggtaaaaacatgggtatatgaaattgtcaacactttaaatgagatttacagatatttgtacgttcgtgtag cactggttgccctagaagtttggtccaacggagatttgagtagcgtcacgttatcagcatatgatactttggactcattt ggagaatggagaaaaagagatttgctgaagcgcaaaagtcatgataatgctcagttactcacggccattgacttcaatgg aacaattataggattggctcacgtggccagcatgtgtgacccgaagtgttctaccggaattgttcaggattatagctcaa gaaatcttgtggttgcagttataatggcccatgaaatgggtcataatctgggcattcgtcatgacagagaaaactgtact tgtcatgctaactcatgcattatgtctgccgtgataagtgatcaaccttccaaatatttcagcaattgtagtcatgtgca atattggaactatattaatgatgatgaaccacaatgcattctcaatgaacccttgagaacagatattgtttcacctccag tttgtggaaatgaacttttggaggtgggagaagaatgtgactgtggctctcctgcaacttgtcgatatccgtgctgtgat gctgcaacatgtaaactacactcatgggtagagtgtgaatctggagagtgttgtgagcaatgcagatttaggacagcagg aacagaatgccgggcaagaaggagtgagtgtgacattgctgaaagctgcactggccattctgctgactgtcccacagatc gcttccataggaatggacaaccatgcctacacaacttcggttactgctacaatggcaattgccccatcatgtatcaccaa tgttatgctctctggggggcaaatgcaactgtggctaaagattcatgttttgaggataaccagaaaggcaatgattatgg ctattgcagaaaggaaaacggtagaaagattccatgtgaaccacaagatgtaaaatgtggcaggttatactgctcacttg gaaaccagcttccttgccgtttcttctatacacccacagatgaaaatattgggatggttgatactggaacaaaatgtgga gataaaaaggtctgcagcaacaggcagtgtgttgatgatcactgctattatcatggacgcatccagaatgatgctgactc aactgcaagcatcagtgcatgcaatggtttgaattcacgaaatacaatggcgattcagataagagaacgagtacatcaaa tggtcaacactatgagggaattcaagaaatacaccagcaattcaactgctataaaaacaagaatatatgcatgtgtcaac actttaaatctgattttcagagctttcaatatttatatagcactgattggcctagaaatttggtccaacaaagatttgat taacgtgcagtcagcatcaaaagttactctggacttatttggaaactggagagagacagtcttgctgaaccgcacaagac atgataatgctcagttactcacggggattgactttgatggagcaactgtaggattggcttacgtgggcaccatgtgtgac ccgaagcgttctgtaggaattgttcaggatcataacaaactagatgttatggttgcaatcgcaatggcccatgagctggg tcataatctgggcattaatcatgacggaaatcagtgtaattgcggtggtaacccatgcatcatgtctgcgacgctaaact ttgagcctgtctatcggttcagcgattgtagtcgggacgaacattgaaagtatcttattgataagaggcctccgtgcatt ctcaacatacccgtgagaacagatattgtttcacctccagtttgtggaaattactttgtggaggtgggagaagaatgtga ctgtggccttcctgcagtaagtttttttttttaatcaacaagagtaattcaaagaactttctcaaaaataggaatccttg caaaaccatctggtttctaagtgtttgagctatccaaggggttggtttgtgaatggcatagatttgtgtcctttttctac atgcatgtatgaagggtttcttggatttggttaaccagttgtagaggaatggagaattggtacttcactcccagccggca tattttttttaaaaatgggtgactgaccactccaagaaaatccttccctactgaaaacccctattttgttgatatggcca cattatctgtcccactattttcttgagctgcttcctcccagaatttgtgatctttaatctatataatgttttttataaga acagtaatttagtaaagtgttctctttatattttaaaa |
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Protein
| Protein ID | habu1_s3258_g11211.t1 |
|---|---|
| Definition | - |
>habu1_s3258_g11211.t1 MSRSGGVARNSRDSLNWMRGPCLVYLGNLQRIIKIRGGSSIILGSGNVNDYEVVYPRKVTAVPKGAVQPKDHCYYHGRIQ NDADSTASISACNGLKGHFKLQGEMYLIEPLRFSDSEAHAVFKYENVEKEDEAPKMCGVTQTNWESDEPIKKASKLVVTA EQQRYLNNFRFIELVIVADYRMFTKFNSNLNEVKTWVYEIVNTLNEIYRYLYVRVALVALEVWSNGDLSSVTLSAYDTLD SFGEWRKRDLLKRKSHDNAQLLTAIDFNGTIIGLAHVASMCDPKCSTGIVQDYSSRNLVVAVIMAHEMGHNLGIRHDREN CTCHANSCIMSAVISDQPSKYFSNCSHVQYWNYINDDEPQCILNEPLRTDIVSPPVCGNELLEVGEECDCGSPATCRYPC CDAATCKLHSWVECESGECCEQCRFRTAGTECRARRSECDIAESCTGHSADCPTDRFHRNGQPCLHNFGYCYNGNCPIMY HQCYALWGANATVAKDSCFEDNQKGNDYGYCRKENGRKIPCEPQDVKCGRLYCSLGNQLPCRFFYTPTDENIGMVDTGTK CGDKKVCSNRQCVDDHCYYHGRIQNDADSTASISACNGLNSRNTMAIQIRERVHQMVNTMREFKKYTSNSTAIKTRIYAC VNTLNLIFRAFNIYIALIGLEIWSNKDLINVQSASKVTLDLFGNWRETVLLNRTRHDNAQLLTGIDFDGATVGLAYVGTM CDPKRSVGIVQDHNKLDVMVAIAMAHELGHNLGINHDGNQCNCGGNPCIMSATLNFEPVYRFSDCSRDEH |
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| Protein ID | habu1_s3258_g11211.t2 |
| Definition | - |
>habu1_s3258_g11211.t2 MSRSGGVARNSRDSLNWMRGPCLVYLGNLQRIIKIRGGSSIILGSGNVNDYEVVYPRKVTAVPKGAVQPKDHCYYHGRIQ NDADSTASISACNGLKGHFKLQGEMYLIEPLRFSDSEAHAVFKYENVEKEDEAPKMCGVTQTNWESDEPIKKASKLVVTA EQQRYLNNFRFIELVIVADYRMFTKFNSNLNEVKTWVYEIVNTLNEIYRYLYVRVALVALEVWSNGDLSSVTLSAYDTLD SFGEWRKRDLLKRKSHDNAQLLTAIDFNGTIIGLAHVASMCDPKCSTGIVQDYSSRNLVVAVIMAHEMGHNLGIRHDREN CTCHANSCIMSAVISDQPSKYFSNCSHVQYWNYINDDEPQCILNEPLRTDIVSPPVCGNELLEVGEECDCGSPATCRYPC CDAATCKLHSWVECESGECCEQCRFRTAGTECRARRSECDIAESCTGHSADCPTDRFHRNGQPCLHNFGYCYNGNCPIMY HQCYALWGANATVAKDSCFEDNQKGNDYGYCRKENGRKIPCEPQDVKCGRLYCSLGNQLPCRFFYTPTDENIGMVDTGTK CGDKKVCSNRQCVDDHCYYHGRIQNDADSTASISACNGLNSRNTMAIQIRERVHQMVNTMREFKKYTSNSTAIKTRIYAC VNTLNLIFRAFNIYIALIGLEIWSNKDLINVQSASKVTLDLFGNWRETVLLNRTRHDNAQLLTGIDFDGATVGLAYVGTM CDPKRSVGIVQDHNKLDVMVAIAMAHELGHNLGINHDGNQCNCGGNPCIMSATLNFEPVYRFSDCSRDEH |
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