Gene
| Gene Model ID | habu1_s3274_g11227 |
|---|---|
| Locus | habu1_scaffold3274 : 4539 ... 23765 : - |
| To GenomeBrowser | habu1_scaffold3274:4539..23765 |
| Genes list of scaffold | habu1_scaffold3274 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cysteine mitochondrial | EC:2.8.1.7 GO:0005634 GO:0005759 GO:0006534 GO:0018283 GO:0030170 GO:0031071 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3274_g11227.t1 | 1 | 1 | Aminotran_5 | 2 | 361 | 0.0 | 314.8 | 0.0 | 0.0 | 314.6 |
| habu1_s3274_g11227.t1 | 1 | 1 | Beta_elim_lyase | 41 | 269 | 9.3e-11 | 41.3 | 3.6e-14 | 1.3e-10 | 40.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3274_g11227.t1 | gi|558168521|ref|XP_006124501.1| | PREDICTED: cysteine desulfurase, mitochondrial [Pelodiscus sinensis] | 0.0 |
| habu1_s3274_g11227.t1 | gi|557319625|ref|XP_006032975.1| | PREDICTED: cysteine desulfurase, mitochondrial isoform X1 [Alligator sinensis] | 0.0 |
| habu1_s3274_g11227.t1 | gi|530648523|ref|XP_005310818.1| | PREDICTED: cysteine desulfurase, mitochondrial isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s3274_g11227.t1 | gi|602668015|ref|XP_007439562.1| | PREDICTED: cysteine desulfurase, mitochondrial [Python bivittatus] | 0.0 |
| habu1_s3274_g11227.t1 | gi|641781602|ref|XP_008173358.1| | PREDICTED: cysteine desulfurase, mitochondrial isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.2 |
| Venom grand-1 | 3.9 |
| Pit, infrared sensing | 6.3 |
| Nose | 6.3 |
| Brain-1 | 14.0 |
| Eye | 7.5 |
| fetal fibroblast | 14.0 |
| venom gland-2 | 4.1 |
| Brain-2 | 14.0 |
| Spleen | 5.4 |
| Lung | 5.7 |
| Liver | 18.0 |
| Kidney | 15.7 |
| Pancreas | 6.0 |
| Small intestine | 3.8 |
| Large intestine | 5.8 |
| Stomach | 5.5 |
| heart | 22.7 |
| ovary | 21.8 |
| cheek muscle | 15.3 |
Transcript
| Transcript ID | habu1_s3274_g11227.t1 |
|---|---|
| Definition | - |
>habu1_s3274_g11227.t1 aaagggcgggtggttttccaaggaaggaggttttcgggggctgtgcaccaacaaggtaaagaccatgttgatgaaacttt actccgaccactatatatggatgtccaagcaactacctctctggacccaagggttttggatagcatgctgccttatcttg tgcattactatggcaacccacactctagaactcatgcatatggttgggaaagtgaaactgcaatggaaaaagccagacag caagttgcatcattaataggagcagatcctcgagaaattatttttaccagtggggccacagaatcaaacaatatagcaat taagggtgttggaagattttataaatccagaaagaaacatataattacaacacaaactgagcacaaatgtgtgctagatt cttgtcgtgccttagaagctgagggctttcgagtcacctacttgcctgtaaagaaaaatggccttatagatataaaggaa ctgaaaaatgcaatacaacctgatacaagcctagtgtcaataatgactgtgaataatgaaataggagtgaaacaaccaat tagtgatataggtgacatttgcagttccaataaagtattttttcatacagatgctgcacaggcagttggaaaaatccctc tggatgtcagtgatatgaaaattgatttaatgagcataagtggccataaaatttatggtcccaaaggggttggtgcaatt tatgtccggcggcgaccaagagtaagagtggaacctatacagagtggaggaggtcaagagcgaggattacgttctggaac tgtgccaactccattagtagttggccttggggcagcttgtgaactggcacagcaagaaatggagtatgaccataaacgaa ttagcttattagctgataggctaatcacaaaaataatgtcagaagttcctgatgttgtaatgaatggagacccagtgcat cgttatccaggttgcatcaatttatcatttgcgtatgtggaaggggaaagcttgctgatggccctgaaagatgtggcact ctcttctggaagtgcttgtacatctgcatctttggaaccgtcatacgtattgcgtgcaattggaacagatgaagacttgg ctcactcatccataagatttggaattggacgttttactactgaagaagaagtagattatactgtaaataaatgcatacaa catgtgaaaagattaagagaaatgagcccactgtgggagatggtacaggatggaattgatttgaaaagcattaaatggac acagcattaaaatacatatatatatatatatcagactgcatggttgtggattaaatgtttctgtacattcctgagaaaaa gtatatagtttcaagtgtgcaatccgtgggtaaccagtgaaatgctctttttaaatacagaacctgaaaactgattctaa ggcagagttttgttttgtgcattaactttcacataaagaagtataaatggacataaaatatgttgacaccaaagaaattg cggtacttttatttttaggtgattttgttgcagcttggtataatgagatttcagaattgtatcattgtggaaaaatgatt gattttgtttcttctgtaagcatcatgaggctattctgaatgtattttatcaacatattacttttcagaaacatacattc aggaataatgtttcttatagaaagtttactttactaaatcctacatcttatgcttacgcactagtgcttgttatataaca gtgagcatgctaaactaagtaaatctataggtagattttcctatgtaaaattcaagtgaaagtgaaagaattaatgttat gtatttcatacagttatgtatttcatgtagaagctgaacagatgcaatttttgtgcttaaacaactaatagaaaaaaata tggaatacaataagaatttctttgttgcatt |
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Protein
| Protein ID | habu1_s3274_g11227.t1 |
|---|---|
| Definition | - |
>habu1_s3274_g11227.t1 MDVQATTSLDPRVLDSMLPYLVHYYGNPHSRTHAYGWESETAMEKARQQVASLIGADPREIIFTSGATESNNIAIKGVGR FYKSRKKHIITTQTEHKCVLDSCRALEAEGFRVTYLPVKKNGLIDIKELKNAIQPDTSLVSIMTVNNEIGVKQPISDIGD ICSSNKVFFHTDAAQAVGKIPLDVSDMKIDLMSISGHKIYGPKGVGAIYVRRRPRVRVEPIQSGGGQERGLRSGTVPTPL VVGLGAACELAQQEMEYDHKRISLLADRLITKIMSEVPDVVMNGDPVHRYPGCINLSFAYVEGESLLMALKDVALSSGSA CTSASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTTEEEVDYTVNKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH |
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