Gene
| Gene Model ID | habu1_s3274_g11231 |
|---|---|
| Locus | habu1_scaffold3274 : 74196 ... 168061 : + |
| To GenomeBrowser | habu1_scaffold3274:74196..168061 |
| Genes list of scaffold | habu1_scaffold3274 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rho gtpase-activating protein 39-like | GO:0005856 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3274_g11231.t1 | 1 | 1 | WW | 47 | 73 | 8.6e-08 | 31.9 | 2.0e-09 | 9.7e-06 | 25.3 |
| habu1_s3274_g11231.t1 | 1 | 1 | MyTH4 | 685 | 782 | 1.5e-18 | 66.7 | 7.7e-22 | 3.8e-18 | 65.4 |
| habu1_s3274_g11231.t1 | 1 | 1 | RhoGAP | 858 | 1000 | 3.6e-29 | 101.3 | 4.8e-32 | 2.4e-28 | 98.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3274_g11231.t1 | gi|602643716|ref|XP_007428316.1| | PREDICTED: rho GTPase-activating protein 39-like [Python bivittatus] | 0.0 |
| habu1_s3274_g11231.t1 | gi|637297108|ref|XP_008108165.1| | PREDICTED: rho GTPase-activating protein 39-like isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s3274_g11231.t1 | gi|530607660|ref|XP_005295511.1| | PREDICTED: rho GTPase-activating protein 39-like [Chrysemys picta bellii] | 0.0 |
| habu1_s3274_g11231.t1 | gi|591357957|ref|XP_007053998.1| | PREDICTED: rho GTPase-activating protein 39-like [Chelonia mydas] | 0.0 |
| habu1_s3274_g11231.t1 | gi|729733752|ref|XP_010562825.1| | PREDICTED: rho GTPase-activating protein 39-like [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.3 |
| Venom grand-1 | 4.8 |
| Pit, infrared sensing | 4.2 |
| Nose | 4.1 |
| Brain-1 | 1.1 |
| Eye | 5.6 |
| fetal fibroblast | 4.4 |
| venom gland-2 | 5.3 |
| Brain-2 | 1.1 |
| Spleen | 2.8 |
| Lung | 3.3 |
| Liver | 3.1 |
| Kidney | 7.4 |
| Pancreas | 4.1 |
| Small intestine | 4.1 |
| Large intestine | 3.7 |
| Stomach | 4.8 |
| heart | 5.6 |
| ovary | 12.1 |
| cheek muscle | 24.4 |
Transcript
| Transcript ID | habu1_s3274_g11231.t1 |
|---|---|
| Definition | - |
>habu1_s3274_g11231.t1 atcaggtttcacatcctgatcctgtctggcttgggaccgagagccttcgctcaccctgaggggcgcagggagaaaagtcc gggtagtgcggcctgagtggagatatggcggcggaaaactcagattgggtggaaattattgaaccccgttctagagaacg aatgtatgttaatttgacaactggagagtgtggttgggatccaccacccaatctcagagttcggcaatctgatgaaaacc agtggtgggaactctttgatcaaaacaacaatcgcttctattattacaatgccatcactcagcagactgtgtggcacagg ccccagggctgtgacattgtgccactagctcggctccaagccatgaaacgtaattcccagtctgagttcgggacatcaca gcacaggaacagtacaagtagtgagggacgaaatactcctatccagataactcttctacaggatatggagaagagtaaag acaacatcagtctcgagaagaggccagaaactgaaagagatacccttacaagttggcagcctttgccagggactaaagca gccatgctggtcaaagttaatagcctaagacaagtaaattcttcctcaagcaattcctttcagatgcaaaacaattcaga aatcaacagccaggaatcaatgaatcccaaagcagttgtatatgctcagtctcagtctatggtcccaaactcattaactc cgaaatctaccgctccagtagagatgaagcgttccatgaaaattaaaaagacagagaacggaggattttgtctggtatta actaatgggcatactcctcagcctccctcaggaaatcagttacaaaaattgcctgcatgtcccaaatatgcttctccgcc tccagtatatgatgaaccatcaattgactccccaatttatgatgaacctcctatagatatggacattagagtcacaaata tgaatgggacaactccacaattgtctccaagcaatagcttaaataagaagatgcagccaattaaattattacagcctcca agtatacaacaacaccagggtggaaaaaagcatttgagaaacccttctacaacagaatatagccctgtgggaaaagaata tattaaacacatggtcaacattgaccagtcatccaaaaaaactcattctaccaccatgataattgatggcatcgataaat cccagttgggtcagcttagctctagggagagcttcaagcagtcttggaaagtcgtagaagctaatgttcttaaaaatatg gaagtccataatagccggcagagcagtcttcaggctcaagaatatcccacagtgataagtcagcaagactctggctattc aacaggtccttctccaagtttaagaaagagaaaaggaagacgacatgctccaggcctgggaagacctggttctgtaggca gcaatagcgaacttactgtgctgaatgacaagcttattgcagaaatgcgtgcagtggtgaatagatctgctgcctacagg gggagcaaaggtagtttagatgcagaaatgctagacaacacgagtatgccagagggtaataaaattaagtttcaatcaga ctattttaaaaagtgtaacagcaggaactcaagagatgatcttacatctagtaacaggtcattatataggcctacagtgg aggctaaaggcagcctctcaaatgatccagcaatacagcaagatgtggtgagacagaagagaacttatgaaaaaatagat tctttagaaaagaatgtgtccagcctgataaacccatcatcatcagacacagcacaattatcaacacagtgcggaacaat agggtctcattctcaagaagagaacaacgttcaatctggaaccaacgtcggatatcagtttcccttccacaccatacgaa agcccatctcccaaagcagcatgactgactgggcttccaaaaatcttaatatgcatactcagggtatctttcggcggagg ctctccattgccaacatgttgtcttggaatggtggctccatcaaaaagccaatgcttatcaccagtaacgacaccatcaa aaaggaagcttgtgaaatatttaaactgacacaaatctatatgggtgaccggcaagccagaatggaccgcaataatgtgg ctttgataaccatcaccaaatgctggagtattcaaggtttacgggatgaactatacattcagctaatcagacaaacaaca gacaatatgtgctaccaaagtctggcacggggctgggaacttatggcaattagtcttgcctttttctccccatcacccaa atttcaatcttacttggaaggttacatctatcgtcacctcagccaaattgcagatgaaaatattacccaacgcattaagg aacttctggatctgaaaaacaaaaaaagctcaaaatccaggaaaaagagaaaacaaagcacagaggatgaaggtctacca atcagtacttatgccaggtattgttaccgaaagctgcaaaaagtagcaatcactggaggcaaaaaaggtcttcggaagcc tacagttgaggagataattcatgctaagaatgctattgtgacaccttcattgtttggcagctcattggaagaaatcatgt caaggcagcaggatatgtatccagataacaagctgccctgggtacaaacacagttgtctcagcaagtactgcgactcggg ggagaacagactgagggaatatttagaattcctggtgatattgatgaagtcaatgctctaaagctacaggtggatcagtg gaagattcctaacaaccttagtgaccccaatataccagcttctttactaaagctgtggtaccgggaactggaagagcctg tcatcccacaacaattctacaaggagtgtgtcagcaactatgagaatcctgatgctgcagtggctgtagttgaacttctg ccagagctcaataaattggtcttatgttacctcatccactttttacagatttttgcccagccaatcaatgtaggcaaaac caagatggatgtaaacaacttggctatggtgatggctccaaattgtctacgatgccagtctgatgaccccagaatcatct ttgaaaatacccgcaaagagatgtctttcctgcgcatgctgattgtgcacttggacaccagttttatcaaaggagttatg tgaaggattggtttctggcaagacagtgcaaaaagagcaattagttggctccagcatttcctttttggagcctcacattg tttcctctagagtttccatgattctacagtgctttgtgatgcttttatttacttatgctgatagtaagtttgatgaatct tcaacaatccccaaatgattcaaatcagagaccatactagaaagagttttgagaaaccagagagcaaaatgttagatcat gctctgggccagtcctaagacctgcagtagttgtttccagcagctctgtgtatgcaaagcccaaatgttatattgcttgc acttcactgaggaatcttagtgaaattaaaagtggaattgtctgttggaagcaaactgtttgcagatactgggatttact tctgtcacctgaagattcaatatttcactagacatgtctcatgtctcaggtaagattgttacttcaggctgctaaagtac atattctgcttggttctgccattcagatcgctgactgctttcttctcaacagcttctctagtatgttttctgcttttcaa ggacaattctcttaccaaaaagaagttttgaagcagtagataagttgtagcttgtgagacaggatgactcttgctatgcc tgaggatatctactactaaaattccaagcatcaatattgtgcagaaatgaaatcttgaattgaattttggtacataacaa aatagcaagaaagtgaaactgtatatttcccttgttttgcctacagtgatttgggaagagactgtttaaatcgttaagtc acttttaccttacgtttactcctatattgtttggattagatgattcaaactcaagaaatccttgaatttctttaattcaa aatcactgcaatcaaagtaacttgtggttgggatttctccagaatggagatttatccagtaagataagctgcagtgatta tggcctcttcagcataaactaaaatcaggtactgaggtgctataaagccttttagaggaaacatgaataactacttaaag attcctgtcaatgtcaagattttgtgttctatttcccattcagcctaatctaaacagacaactagaagcatcaattatct tttaaaacattggatcaaaggaagctgtaaggtggagagatttaagtgaataaaaagtgcaggattggagaaaattagct gttcttccctttatcactttctaaatatcctcagtgtgctgttagatgcagaatgaaagagggaaagccaaattatatct gttttgttttctctctgaccagtagcaatttcaaaaatataatttgagttgagactacagtacatagaggaaaatatatg tttcccagttctccagtcaaaatcaaatccctactacctcccacaacttcatattaaataaaaaaaattgagagctccaa atacaaatttctcacatcatgcattataactattaaatggtataatgctgtcttactctggatttcattctattcttgcc taaacgtctcagaaagactgctgttctctttgttctttcagtccctggaacacatgctgaataggaggactggcgcttca gttctgcttctttgttttgttcttatactgcaaacacatcccagaatccaaagccttcagtgttcctttatgtcattttg gaagtgagtgtaattctttcatcgatcttctggacagaataacagacttgaattttttggaaagaaagtgggaatggtca aggaaataattttatggaaaaataaaaatcaactttgttaatttttacaagttggtgctaagagcaattcctgtgccagt aagaatgggatttgtcctagacgtattagtatttccaagtcactggttagtatgatctaactgggtaaagaaatatatat tttccttctattgccataaattatgatacttgttagaaggttctcacatgttattaatggaattaacatttactactgtt tcctgtatgagtcagttctgctgtaaaattagatcctttaagatgatctatgttgtaatgccaaagtctttgttcactct ttatctcatagtgtttttttgaaatttagcttcttttcaggggacaattcaaggtatctggaaatattaatttctagatt ccaaataaagccatcttctgagagtctgttatgagtatatatacatctatgcagcagtgtatgggttatcctagggtaaa gggtatactatttgcgggctcttacagaaaaagtaatgcagcatttctcactccagtttcctccaaataggtagatttta tttcgcagaattatctaaatagtacaactgtgactgaaacttctgagagttgtattgtcacatttctgtttggggggggg gagaaactggagtaaggcaatatgtcacatatctattttaactatgttatcaggcagacataagtgatgcccatgtatct gtacataattgatactttgaacctaagcccaaaatccaggcattgattatgatacattttcttatcttactgaaagtttc atttgatgtagtcgattagcctgagatttctgaggagttaagtactattcaaataggcttctctaccaaaatttggccag tactcttgataaaatctgaaatggggtcttaattctaaataataaggattagactcctattcatttgtatttggagaaag ccccattaaactcagtggaattgatttctgagtaaacatgcgtgtgactgttaaaatattgggttgtatctaacaatcct ttcaccactgtacactactgacagatcaaattcagaattatttttgcagcttctgggtgtcctccagatctgttccatag gacaaggagaggaatagaagtgattgctgtttgaggagaaatacattcacacataacagatgtagtccatcataattttc atatttctcagacttgccaaaacaagagtttcttgagtctacttctatgactatgtaggagactctggatttccttagac tggtcctgtttgtgctgtacgttttctataatgcatctttgtacaatgggaaatattaaccaatatgcaaggtgtcatat acctaccctacttttttaaattttgtatttattgttttaagatgttctctgatgcacacgattccaggtttaaacactgt tgacaactaaaatattatgagtaattattacaatcctttctccccagcactacactataatccaaacataaactgactgt tctataataatgct |
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Protein
| Protein ID | habu1_s3274_g11231.t1 |
|---|---|
| Definition | - |
>habu1_s3274_g11231.t1 MAAENSDWVEIIEPRSRERMYVNLTTGECGWDPPPNLRVRQSDENQWWELFDQNNNRFYYYNAITQQTVWHRPQGCDIVP LARLQAMKRNSQSEFGTSQHRNSTSSEGRNTPIQITLLQDMEKSKDNISLEKRPETERDTLTSWQPLPGTKAAMLVKVNS LRQVNSSSSNSFQMQNNSEINSQESMNPKAVVYAQSQSMVPNSLTPKSTAPVEMKRSMKIKKTENGGFCLVLTNGHTPQP PSGNQLQKLPACPKYASPPPVYDEPSIDSPIYDEPPIDMDIRVTNMNGTTPQLSPSNSLNKKMQPIKLLQPPSIQQHQGG KKHLRNPSTTEYSPVGKEYIKHMVNIDQSSKKTHSTTMIIDGIDKSQLGQLSSRESFKQSWKVVEANVLKNMEVHNSRQS SLQAQEYPTVISQQDSGYSTGPSPSLRKRKGRRHAPGLGRPGSVGSNSELTVLNDKLIAEMRAVVNRSAAYRGSKGSLDA EMLDNTSMPEGNKIKFQSDYFKKCNSRNSRDDLTSSNRSLYRPTVEAKGSLSNDPAIQQDVVRQKRTYEKIDSLEKNVSS LINPSSSDTAQLSTQCGTIGSHSQEENNVQSGTNVGYQFPFHTIRKPISQSSMTDWASKNLNMHTQGIFRRRLSIANMLS WNGGSIKKPMLITSNDTIKKEACEIFKLTQIYMGDRQARMDRNNVALITITKCWSIQGLRDELYIQLIRQTTDNMCYQSL ARGWELMAISLAFFSPSPKFQSYLEGYIYRHLSQIADENITQRIKELLDLKNKKSSKSRKKRKQSTEDEGLPISTYARYC YRKLQKVAITGGKKGLRKPTVEEIIHAKNAIVTPSLFGSSLEEIMSRQQDMYPDNKLPWVQTQLSQQVLRLGGEQTEGIF RIPGDIDEVNALKLQVDQWKIPNNLSDPNIPASLLKLWYRELEEPVIPQQFYKECVSNYENPDAAVAVVELLPELNKLVL CYLIHFLQIFAQPINVGKTKMDVNNLAMVMAPNCLRCQSDDPRIIFENTRKEMSFLRMLIVHLDTSFIKGVM |
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