Gene
| Gene Model ID | habu1_s3274_g11233 |
|---|---|
| Locus | habu1_scaffold3274 : 215407 ... 225805 : - |
| To GenomeBrowser | habu1_scaffold3274:215407..225805 |
| Genes list of scaffold | habu1_scaffold3274 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| src-like-adapter 2 | GO:0005515 GO:0009966 GO:0043231 GO:0044444 GO:0048523 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3274_g11233.t1 | 1 | 1 | SH3_9 | 41 | 86 | 6.4e-06 | 25.6 | 3.4e-09 | 1.7e-05 | 24.3 |
| habu1_s3274_g11233.t1 | 1 | 1 | SH2 | 95 | 177 | 1.8e-19 | 69.2 | 6.3e-23 | 3.1e-19 | 68.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3274_g11233.t1 | gi|602643724|ref|XP_007428320.1| | PREDICTED: src-like-adapter 2 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s3274_g11233.t1 | gi|602643726|ref|XP_007428321.1| | PREDICTED: src-like-adapter 2 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s3274_g11233.t1 | gi|637297133|ref|XP_008108170.1| | PREDICTED: src-like-adapter 2 [Anolis carolinensis] | 0.0 |
| habu1_s3274_g11233.t1 | gi|530607650|ref|XP_005295506.1| | PREDICTED: src-like-adapter 2 [Chrysemys picta bellii] | 0.0 |
| habu1_s3274_g11233.t1 | gi|557319650|ref|XP_006032985.1| | PREDICTED: src-like-adapter 2 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.9 |
| Venom grand-1 | 0.2 |
| Pit, infrared sensing | 1.2 |
| Nose | 0.7 |
| Brain-1 | 0.4 |
| Eye | 0.9 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.1 |
| Spleen | 1.4 |
| Lung | 0.3 |
| Liver | 0.3 |
| Kidney | 0.3 |
| Pancreas | 0.5 |
| Small intestine | 1.0 |
| Large intestine | 1.0 |
| Stomach | 0.2 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s3274_g11233.t1 |
|---|---|
| Definition | - |
>habu1_s3274_g11233.t1 attttgagagtgctgaacactctcaatgtctttgggaactaatttatcacacagtggttttctgtggagaaaaatgaaac agtcatcaaccacctttccattacgtcaaaggaaactgagcaattcgtgagttcttagaatttaacacttcttaataaca tgcactcaaactataaaagttataccaatctgctgtgtatcatgcttgggcgcacttggcattaagaaggatcaagataa cattattgcttcaatattatttgcacctgtatactgcatgacaacagttgcctgaaagactgcagcaaaagatccaaacc aatagaaaaatagtttgcaggcaactcatgacatttgtattccgagaaacttccactaaagaaaaagtctttctctggag cacccatatgaattgtgctctagttagaattgggtgttgtcatcagtttccagagttcctacactgaaagaaaaattccc tacattgaaagaaaaaaaatcacctatctgaagacctggctattgtataatgaaaggcctctctgagtggtatactagaa gattgctgttagcaacaaattgtgatgggaagcttgcccagtaagaggaaacagattgctaaccagacaagcccacaact gaacacatggcacagccagagctatagcgtagacctgccagctgccaattcgcccatagttgttgcagtcagtgattttc cttctagagacacagagccagtactaaggatgggggaacagctgagtttggtatctgaagagggtgaatggtgtcaagtc aagtcagtagcaactggccaagaatgctgtgtacctagcaacagcatagttaaaatttcacacaggtggctctatgatgg cattgatcgagccaaagctgaggagttgttactgttgcctgcaaaccaggaaggttctttcatcataagaaagagagaag cgaagaaaggttgctactctttatcaatcagatgcacaaatcatgaatcctggaattgtgtaaaacactaccgcattaat tgtttggagaacagctggctttatatctctcccagccttaccttcccaagcttgcacgaactggtagactattattctga aactagtgatggcttatgttgctgcttgaagaaaccgtgcttcatccaaggaactagttccagcttgtttcatcatcttt ccaaacctgtggcagtaaaaaaatctgttctcaactggcaacagatcaagagctcagacttgttgtcagaagaaccacta acagaagactcacctatcagtcttggcttgcgagaagcagttactacttacctgtttgtgactgatgaagtgtcattaca gggctcatcaaacagaaaaggaaagcaaaccaaagctgtataaagctaatattggaagtatttctggaatattaaacttg aacacaagatctgtattt |
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Protein
| Protein ID | habu1_s3274_g11233.t1 |
|---|---|
| Definition | - |
>habu1_s3274_g11233.t1 MGSLPSKRKQIANQTSPQLNTWHSQSYSVDLPAANSPIVVAVSDFPSRDTEPVLRMGEQLSLVSEEGEWCQVKSVATGQE CCVPSNSIVKISHRWLYDGIDRAKAEELLLLPANQEGSFIIRKREAKKGCYSLSIRCTNHESWNCVKHYRINCLENSWLY ISPSLTFPSLHELVDYYSETSDGLCCCLKKPCFIQGTSSSLFHHLSKPVAVKKSVLNWQQIKSSDLLSEEPLTEDSPISL GLREAVTTYLFVTDEVSLQGSSNRKGKQTKAV |
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