Gene
| Gene Model ID | habu1_s3274_g11239 |
|---|---|
| Locus | habu1_scaffold3274 : 563349 ... 596328 : + |
| To GenomeBrowser | habu1_scaffold3274:563349..596328 |
| Genes list of scaffold | habu1_scaffold3274 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| deoxynucleoside triphosphate triphosphohydrolase samhd1 | EC:3.1.5.1 GO:0003723 GO:0005634 GO:0005886 GO:0006144 GO:0006203 GO:0008270 GO:0008832 GO:0032567 GO:0045088 GO:0046061 GO:0051289 GO:0051607 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3274_g11239.t1 | 1 | 1 | SAM_2 | 45 | 107 | 8.6e-09 | 35.1 | 4.0e-12 | 2.0e-08 | 33.9 |
| habu1_s3274_g11239.t1 | 1 | 1 | SAM_1 | 45 | 107 | 1.3e-07 | 31.6 | 6.7e-11 | 3.3e-07 | 30.3 |
| habu1_s3274_g11239.t1 | 1 | 1 | HD | 164 | 319 | 3.1e-16 | 59.4 | 1.7e-19 | 8.4e-16 | 58.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3274_g11239.t1 | gi|602625954|ref|XP_007419940.1| | PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [Python bivittatus] | 0.0 |
| habu1_s3274_g11239.t1 | gi|637297170|ref|XP_003220590.2| | PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [Anolis carolinensis] | 0.0 |
| habu1_s3274_g11239.t1 | gi|530607604|ref|XP_005295484.1| | PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s3274_g11239.t1 | gi|591357947|ref|XP_007053993.1| | PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [Chelonia mydas] | 0.0 |
| habu1_s3274_g11239.t1 | gi|558116915|ref|XP_006113263.1| | PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1, partial [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.8 |
| Venom grand-1 | 1.3 |
| Pit, infrared sensing | 2.4 |
| Nose | 4.4 |
| Brain-1 | 4.8 |
| Eye | 1.3 |
| fetal fibroblast | 3.4 |
| venom gland-2 | 1.0 |
| Brain-2 | 5.3 |
| Spleen | 1.3 |
| Lung | 1.4 |
| Liver | 0.2 |
| Kidney | 0.4 |
| Pancreas | 0.9 |
| Small intestine | 0.8 |
| Large intestine | 0.9 |
| Stomach | 0.5 |
| heart | 1.3 |
| ovary | 28.0 |
| cheek muscle | 1.7 |
Transcript
| Transcript ID | habu1_s3274_g11239.t1 |
|---|---|
| Definition | - |
>habu1_s3274_g11239.t1 gcgcttttcctcatcagagcggcggagcgatgtcgaacgataaccgggaaggggcccttaaacgggcccggcccaccagc ccggccgatggcttccagacgcctcaaaagcgcggcgttaccgctgcaggctcggcggattctgttaagctccatcttcg gttctgggacacggagcagctgtgcgtcttccttcaggaacagggcttcgaagctgcggagctgcagtgctttcgagaac ataaaataaccggttcaactgtaccatatctcactgaatctcatcttgaaaaaatgggaattcgagctgtaggagtgaaa gagaagctgctaatttgtgtgcgccaactggctcaaagtcaaactgatataacaaaagtatttaatgatccaatccatgg tcatattgaaatgcatcctcttcttgtttgcattattgacacacctcaatttcagcgtctacgatatattaaacagttgg gtggcacttattatgttttcccaggagcatcacacaatcgctttgaacattctcttggtgttagtcatctcgcaggccgt ttggtgcaggcgttgcaagaacgacaaccggaactgaatattgatcaaagggatattctctgtgttcagattgctggact ttgtcatgatttgggtcatggaccattttcacatatgtttgatggaagattcattccacttgctcgcccgggattaaaat ggaagcatgagcaggcttctgttcagatgtttgaacacttaatcacttccaataagctaaggtcaaaaatggaatattat ggtctcaagttggatgaagacatagattttatcaaagaacagatagcaagtcctgttgagaataaaaggggggttgaaaa gtggccctatcatggtcgttccaaaaaaaagagttttctttatgaaatagtggctaacaaaacaagtggcattgatgttg ataaatgggactactttgccagggattgtcatcatcttggaattcaaaacaattttgattatgagcgcttcattaaattt gctcgggtgtgccaagtgaaagatatgatgcatatttgtacccgtgacaaggaggttggaaatttgtatgatatgttcca cacacgaaattgtctccaccgcagagcatatcagcataaagttggcaacattattgaaaccatgattactgatgcctttt taaaggctgatccacatatcaaaataaagggctcagatggaaaagtattccagatctctacagcactggaagacatggaa gcctatacaaagctgacagatgacatctttttaaagattctacattctgatgaaccagagctgagtgatgcacgggaaat tctgtgtaaaatacagcagcgtgatctctttaagtgcttgggggaaacgcagccaccagagggcaaggaaattaaaaagg aagactatgatagattgtgtgctgaaattgttgagtgcaaacctatgacaatttctcaagatgtggaactgaacgctgaa gatttttttgttgatgttattgatatggattatggaatgaaagaaaggaaccccatcaataatgttcatttctactgcaa gcatgacatcactcaggcagtcaaaattgcaagagaacaagtttcaaagctgctcccagaaaaatttgcagagcagagca tcagagtttattgtaaaaaaaaggatacaaagataattgaagctgctacaaaatattttgttcagtggtgtatgaataag gatttcactaaaccacgggatggtgatgtggttgctccagaacttactccaatgaaaaaaggctggaacaaggatgatga aaatcaggtttcaaacataaacagtcctgctttaaattgtaaaacaaaacttttttaaagattgagttaatatattcctt caatcgtgtgtgtttgcatgtatctttgtgtgtggatgtattctagccaaactttctccaaaagatattctgtaaaatta cagagtaagcctgcataatccctttgaaaaactgcagtggaaaatacctgtagactttttcacaaaattgtatattattg tggttttgagaaagctgtgcaaataatttatcaacactattttagtgttaatttaagataaacatcactgttctatatag caaacttacaaaaatacctcagggtttaaaagtcaagaaactaagatttataaatcatttttctaaaatattctga |
|
Protein
| Protein ID | habu1_s3274_g11239.t1 |
|---|---|
| Definition | - |
>habu1_s3274_g11239.t1 MSNDNREGALKRARPTSPADGFQTPQKRGVTAAGSADSVKLHLRFWDTEQLCVFLQEQGFEAAELQCFREHKITGSTVPY LTESHLEKMGIRAVGVKEKLLICVRQLAQSQTDITKVFNDPIHGHIEMHPLLVCIIDTPQFQRLRYIKQLGGTYYVFPGA SHNRFEHSLGVSHLAGRLVQALQERQPELNIDQRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGLKWKHEQASVQM FEHLITSNKLRSKMEYYGLKLDEDIDFIKEQIASPVENKRGVEKWPYHGRSKKKSFLYEIVANKTSGIDVDKWDYFARDC HHLGIQNNFDYERFIKFARVCQVKDMMHICTRDKEVGNLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFLKADPHIKIK GSDGKVFQISTALEDMEAYTKLTDDIFLKILHSDEPELSDAREILCKIQQRDLFKCLGETQPPEGKEIKKEDYDRLCAEI VECKPMTISQDVELNAEDFFVDVIDMDYGMKERNPINNVHFYCKHDITQAVKIAREQVSKLLPEKFAEQSIRVYCKKKDT KIIEAATKYFVQWCMNKDFTKPRDGDVVAPELTPMKKGWNKDDENQVSNINSPALNCKTKLF |
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