Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s3274_g11244
Locus habu1_scaffold3274 : 804932 ... 824836 : -
To GenomeBrowser habu1_scaffold3274:804932..824836
Genes list of scaffold habu1_scaffold3274

Annotation by Blast2GO
Annotation GO
glutathione synthetase EC:6.3.2.3 GO:0000287 GO:0004363 GO:0005524 GO:0006750 GO:0042803 GO:0043295 GO:0046686 GO:0070062

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s3274_g11244.t2 1 1 GSH_synth_ATP 10 472 0.0 472.5 0.0 0.0 472.4
habu1_s3274_g11244.t2 1 1 GSH_synthase 203 302 1.7e-34 118.0 5.1e-38 3.8e-34 116.9

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.7
Venom grand-1 4.0
Pit, infrared sensing 2.2
Nose 3.2
Brain-1 2.0
Eye 4.1
fetal fibroblast 7.1
venom gland-2 4.1
Brain-2 2.5
Spleen 2.7
Lung 2.3
Liver 3.7
Kidney 6.4
Pancreas 2.6
Small intestine 2.2
Large intestine 2.9
Stomach 2.5
heart 2.0
ovary 9.9
cheek muscle 3.3

Transcript
Transcript IDhabu1_s3274_g11244.t1
Definition-
>habu1_s3274_g11244.t1
acttttccgatatgattatacgagactcctgtcaatcagtgcaaaggacactggtgttcgtggataggctgaaagagtag
ccaatctgtgaagggttatctgagcggacatagttgtggattcccgtctgagtggtctcagtctttgcaatgactacgct
ttggaaagatattttgcaaaatgtggagctcattcaatatgtagctccaatcgcaatagatgtagcactacttcaaggtg
ttctaatgaggaccaaagatgaccccaatgcttctgatgttgtgaattatgcaccttttacattgctcccatctccagta
ccaaaagatctgcttgaacaagcctattccattcaacaagactttaacctgctagtggataaagttagccaggatacaga
attcctagagtgcactcttgccagtatcattaaagtggatgactttacagctcaactgtttaaaatttacaagcaggttt
tggatgaaggaattgctcagtcagtggttttaggaatcaatcgctctgattacatgtttgactatggtgcagatggttct
gcagctctaaaacaagtagaaataaacaccattgctgcaagctttggaggcctcacatctcgaaccactacagtacatcg
gcatgtgatgaatgttttggggaaatcaaaggaagcctcaaaattgctttccaataatccatccaaaggaattgcaatgg
gcattgcaagagcttgggaactctacggctcagatagagcagtggtgatgtttctggttgaagaggctcagagaaatatt
tttgaccaacgctgtatagaaaatgaactatggataaggaatatcaaggtgatccgaaaaagttttaaagatgtgtttga
aaaagcctctttggaaagtgaaaagaaattgtacatagatgggcaggaagtagcagtggtatactacagggaaggctata
tgccaacaagttataatgaacagaactgggaggcacggttattactggaaaagtccagagcagttaaatgtcctgatata
gctacacaacttgttggaactaaaaaagttcagcaggagctcagccagccaggagtcctggaaagattcttgccaaatga
accagaagcagtggctcggttgagagcaacgttcacaggtctctactccttggaactggatgaagagggtgataagatgg
ttgccattgctattgctgatccagatcgattcgtgttaaaaccacaacgggaagggggagggaataatctctatggagat
gagctcaagcaagttctggagaaaattaaggacagttctgagaggacttcttatattctcatggataagataaagcctct
cccaacactaaattacttattgagggctcattgtccactgaaaatatcagaatgtgtgtctgaattgggaatctttggag
tctatatcagacatggtcagactcttgtgatgaacaagcatgtgggccatctcttgagaacaaaggctatagaacatgca
gatggtggagtagcagctggtgtagctgtcttggatactccttatgtgatataaaaaaggacacattttttttaaaggca
tgattgccaaatagcagacttggtaatcaaacttataacaattctctttaataatctgcagtcttacccagaaaatattc
taaattacctacattgaaattttctgcaatatcctgtcaaagatgcatcttacggacctaatatgctttttaacaatcat
gatcaactggatgataagtatctcctaaaagaacatgtagatttctgatagcagaaaatattcttgataactttctatgt
attcaagatataattctgtttttctcaaagtagcaataaggaattaaattcttccggaattacagtcttttgggaaactt
cctgtttcactctgtttctgcataaaaatgacccgaaaacaaaaaagaatgatgtatccatgttggtttttatggtgctt
gtgataagctccattgaaagatgcacaaacactagcattaggtaaagggacataataaaaagtgtaaaatcatttccatt
tcagtgatccctgtacccatctgtattttataaagcaaaagatctaagaaaaagacaaaagatgcgtttagtgggaaaag
atttcaaaaccaactttaacatgcaaaatgtctatagcagccaggtttattagaactaatttgaactaaaaatagtagtg
aaagactcatcagttctgtctcatgtctaagtaactgataggtgattataaaaaaagtatcaatataaaaaaagtatcag
taagatagcaaatgtgtaagtttaaaaatcagatctactgatgtgaagaacgtgtgttatggttattttttaaactcaga
ttcttaaatctccaattgaaacaatggattttgtctcattgcagaaaacagaatatctttcttgtaatattattgacagt
atactatcttttcagtctttcacaccttagcacttcgctttaaaaagatatcttctctatatatgtttctttcgttcaac
agcactatctcactttacacatggatatcttgactacagccttatttaattttagaagacaggcttagagaattaatgga
gctatttgagaacacaatattaagaatcagaataatgttatagattggaaaatattctgaaaaataattagtgacaatta
tatctctccccccctcctaagtttctagcatagaaccagtggggttttgggggggggtgtcattatattctgacatttct
atcaattgcaaagtattatatttctaaagttggaaatattttatgttatgatattttatatgctatgatgttaaatctta
cattttaacaaaccagcagaatccagttaatgtgatcagcatatttgggagacagcaatttggtatggatatatagtcat
gtatggccttactaggtataaactatagatttgtgtagccacaatttgaaaaaggataagtggacctcaaatctgaagca
ttgagtagacaaattcataatccaccagttcaactcttccataatgcagaagaaatgctactgatttttcttttgcattt
tcttttagctttattatgtagtttaaattctactgcaagctagtagaccattttcactagacttgaagcaaatgaagtca
gtagatcacattttattatttaattttatctacctttgttgacaaaagttcactgcagccaattcataatcaataccaca
acaagaatatgcattgttttgaattcaaaaggaaaaatatgctctggtgcacagggacatttacacaacacagctttgca
attctttaaagcagccacctcttgagattgcacggttgatatgtgcaactgcaacacactccttggcttaggaagataca
accaagtgctggtacatgctccaaatcagctgtctgcctttgaatccagagcaatgcacagccctaataatgagtcccaa
tttgaaaacgggtagtcctcgacttacagcagtttgtttagtgatcgttcaaagttacagcagcactgaaaaaagtggct
tatgaccatttttcacacttaggatcattccagcatccccatggtcacatgatcaaaattcagccacttggcaattcagt
catatttatgacagc
Transcript IDhabu1_s3274_g11244.t2
Definition-
>habu1_s3274_g11244.t2
gtccgacgcctttccttgcccactggaagggagaaatgggaggacccagtggtgcccattaacccacagtctttctcagt
ctttgcaatgactacgctttggaaagatattttgcaaaatgtggagctcattcaatatgtagctccaatcgcaatagatg
tagcactacttcaaggtgttctaatgaggaccaaagatgaccccaatgcttctgatgttgtgaattatgcaccttttaca
ttgctcccatctccagtaccaaaagatctgcttgaacaagcctattccattcaacaagactttaacctgctagtggataa
agttagccaggatacagaattcctagagtgcactcttgccagtatcattaaagtggatgactttacagctcaactgttta
aaatttacaagcaggttttggatgaaggaattgctcagtcagtggttttaggaatcaatcgctctgattacatgtttgac
tatggtgcagatggttctgcagctctaaaacaagtagaaataaacaccattgctgcaagctttggaggcctcacatctcg
aaccactacagtacatcggcatgtgatgaatgttttggggaaatcaaaggaagcctcaaaattgctttccaataatccat
ccaaaggaattgcaatgggcattgcaagagcttgggaactctacggctcagatagagcagtggtgatgtttctggttgaa
gaggctcagagaaatatttttgaccaacgctgtatagaaaatgaactatggataaggaatatcaaggtgatccgaaaaag
ttttaaagatgtgtttgaaaaagcctctttggaaagtgaaaagaaattgtacatagatgggcaggaagtagcagtggtat
actacagggaaggctatatgccaacaagttataatgaacagaactgggaggcacggttattactggaaaagtccagagca
gttaaatgtcctgatatagctacacaacttgttggaactaaaaaagttcagcaggagctcagccagccaggagtcctgga
aagattcttgccaaatgaaccagaagcagtggctcggttgagagcaacgttcacaggtctctactccttggaactggatg
aagagggtgataagatggttgccattgctattgctgatccagatcgattcgtgttaaaaccacaacgggaagggggaggg
aataatctctatggagatgagctcaagcaagttctggagaaaattaaggacagttctgagaggacttcttatattctcat
ggataagataaagcctctcccaacactaaattacttattgagggctcattgtccactgaaaatatcagaatgtgtgtctg
aattgggaatctttggagtctatatcagacatggtcagactcttgtgatgaacaagcatgtgggccatctcttgagaaca
aaggctatagaacatgcagatggtggagtagcagctggtgtagctgtcttggatactccttatgtgatataaaaaaggac
acattttttttaaaggcatgattgccaaatagcagacttggtaatcaaacttataacaattctctttaataatctgcagt
cttacccagaaaatattctaaattacctacattgaaattttctgcaatatcctgtcaaagatgcatcttacggacctaat
atgctttttaacaatcatgatcaactggatgataagtatctcctaaaagaacatgtagatttctgatagcagaaaatatt
cttgataactttctatgtattcaagatataattctgtttttctcaaagtagcaataaggaattaaattcttccggaatta
cagtcttttgggaaacttcctgtttcactctgtttctgcataaaaatgacccgaaaacaaaaaagaatgatgtatccatg
ttggtttttatggtgcttgtgataagctccattgaaagatgcacaaacactagcattaggtaaagggacataataaaaag
tgtaaaatcatttccatttcagtgatccctgtacccatctgtattttataaagcaaaagatctaagaaaaagacaaaaga
tgcgtttagtgggaaaagatttcaaaaccaactttaacatgcaaaatgtctatagcagccaggtttattagaactaattt
gaactaaaaatagtagtgaaagactcatcagttctgtctcatgtctaagtaactgataggtgattataaaaaaagtatca
atataaaaaaagtatcagtaagatagcaaatgtgtaagtttaaaaatcagatctactgatgtgaagaacgtgtgttatgg
ttattttttaaactcagattcttaaatctccaattgaaacaatggattttgtctcattgcagaaaacagaatatctttct
tgtaatattattgacagtatactatcttttcagtctttcacaccttagcacttcgctttaaaaagatatcttctctatat
atgtttctttcgttcaacagcactatctcactttacacatggatatcttgactacagccttatttaattttagaagacag
gcttagagaattaatggagctatttgagaacacaatattaagaatcagaataatgttatagattggaaaatattctgaaa
aataattagtgacaattatatctctccccccctcctaagtttctagcatagaaccagtggggttttgggggggggtgtca
ttatattctgacatttctatcaattgcaaagtattatatttctaaagttggaaatattttatgttatgatattttatatg
ctatgatgttaaatcttacattttaacaaaccagcagaatccagttaatgtgatcagcatatttgggagacagcaatttg
gtatggatatatagtcatgtatggccttactaggtataaactatagatttgtgtagccacaatttgaaaaaggataagtg
gacctcaaatctgaagcattgagtagacaaattcataatccaccagttcaactcttccataatgcagaagaaatgctact
gatttttcttttgcattttcttttagctttattatgtagtttaaattctactgcaagctagtagaccattttcactagac
ttgaagcaaatgaagtcagtagatcacattttattatttaattttatctacctttgttgacaaaagttcactgcagccaa
ttcataatcaataccacaacaagaatatgcattgttttgaattcaaaaggaaaaatatgctctggtgcacagggacattt
acacaacacagctttgcaattctttaaagcagccacctcttgagattgcacggttgatatgtgcaactgcaacacactcc
ttggcttaggaagatacaaccaagtgctggtacatgctccaaatcagctgtctgcctttgaatccagagcaatgcacagc
cctaataatgagtcccaatttgaaaacgggtagtcctcgacttacagcagtttgtttagtgatcgttcaaagttacagca
gcactgaaaaaagtggcttatgaccatttttcacacttaggatcattccagcatccccatggtcacatgatcaaaattca
gccacttggcaattcagtcatatttatgacagc

Protein
Protein IDhabu1_s3274_g11244.t1
Definition-
>habu1_s3274_g11244.t1
MTTLWKDILQNVELIQYVAPIAIDVALLQGVLMRTKDDPNASDVVNYAPFTLLPSPVPKDLLEQAYSIQQDFNLLVDKVS
QDTEFLECTLASIIKVDDFTAQLFKIYKQVLDEGIAQSVVLGINRSDYMFDYGADGSAALKQVEINTIAASFGGLTSRTT
TVHRHVMNVLGKSKEASKLLSNNPSKGIAMGIARAWELYGSDRAVVMFLVEEAQRNIFDQRCIENELWIRNIKVIRKSFK
DVFEKASLESEKKLYIDGQEVAVVYYREGYMPTSYNEQNWEARLLLEKSRAVKCPDIATQLVGTKKVQQELSQPGVLERF
LPNEPEAVARLRATFTGLYSLELDEEGDKMVAIAIADPDRFVLKPQREGGGNNLYGDELKQVLEKIKDSSERTSYILMDK
IKPLPTLNYLLRAHCPLKISECVSELGIFGVYIRHGQTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDTPYVI
Protein IDhabu1_s3274_g11244.t2
Definition-
>habu1_s3274_g11244.t2
MTTLWKDILQNVELIQYVAPIAIDVALLQGVLMRTKDDPNASDVVNYAPFTLLPSPVPKDLLEQAYSIQQDFNLLVDKVS
QDTEFLECTLASIIKVDDFTAQLFKIYKQVLDEGIAQSVVLGINRSDYMFDYGADGSAALKQVEINTIAASFGGLTSRTT
TVHRHVMNVLGKSKEASKLLSNNPSKGIAMGIARAWELYGSDRAVVMFLVEEAQRNIFDQRCIENELWIRNIKVIRKSFK
DVFEKASLESEKKLYIDGQEVAVVYYREGYMPTSYNEQNWEARLLLEKSRAVKCPDIATQLVGTKKVQQELSQPGVLERF
LPNEPEAVARLRATFTGLYSLELDEEGDKMVAIAIADPDRFVLKPQREGGGNNLYGDELKQVLEKIKDSSERTSYILMDK
IKPLPTLNYLLRAHCPLKISECVSELGIFGVYIRHGQTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDTPYVI

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