Gene
| Gene Model ID | habu1_s3274_g11247 |
|---|---|
| Locus | habu1_scaffold3274 : 904809 ... 934926 : - |
| To GenomeBrowser | habu1_scaffold3274:904809..934926 |
| Genes list of scaffold | habu1_scaffold3274 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| short transient receptor potential channel 4-associated protein | GO:0006511 GO:0019902 GO:0031464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3274_g11247.t1 | 1 | 1 | DUF3689 | 399 | 709 | 0.0 | 436.7 | 0.0 | 0.0 | 436.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3274_g11247.t1 | gi|602625966|ref|XP_007419946.1| | PREDICTED: short transient receptor potential channel 4-associated protein [Python bivittatus] | 0.0 |
| habu1_s3274_g11247.t1 | gi|637297211|ref|XP_003220595.2| | PREDICTED: short transient receptor potential channel 4-associated protein [Anolis carolinensis] | 0.0 |
| habu1_s3274_g11247.t1 | gi|530607690|ref|XP_005295525.1| | PREDICTED: short transient receptor potential channel 4-associated protein [Chrysemys picta bellii] | 0.0 |
| habu1_s3274_g11247.t1 | gi|543379444|ref|XP_005532919.1| | PREDICTED: short transient receptor potential channel 4-associated protein [Pseudopodoces humilis] | 0.0 |
| habu1_s3274_g11247.t1 | gi|86129538|ref|NP_001034406.1| | short transient receptor potential channel 4-associated protein [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.2 |
| Venom grand-1 | 6.3 |
| Pit, infrared sensing | 5.8 |
| Nose | 5.3 |
| Brain-1 | 5.6 |
| Eye | 4.5 |
| fetal fibroblast | 7.9 |
| venom gland-2 | 6.6 |
| Brain-2 | 6.2 |
| Spleen | 7.4 |
| Lung | 6.2 |
| Liver | 6.9 |
| Kidney | 6.6 |
| Pancreas | 7.8 |
| Small intestine | 6.8 |
| Large intestine | 5.9 |
| Stomach | 6.6 |
| heart | 7.3 |
| ovary | 25.7 |
| cheek muscle | 19.3 |
Transcript
| Transcript ID | habu1_s3274_g11247.t1 |
|---|---|
| Definition | - |
>habu1_s3274_g11247.t1 gaggggagagaagcttcctgtttgcgtctggccggggcaagagcgactatggcatccacaatagggggtgcaggagctgc attgctagctctaccaccagcagcggaccctgtttcctgcacgcctggccggcgtgaagcaaagagaggaccgatcaaca tcctggcccagcttcggcatgcacagctcagcggccggggcctgacacgggggtcacagatcacaggagctttgttaaaa gaaagagacaaacaagcaaagtggaatggaattcctatgctcttacaaaagctctatgagactagccatgctaatagtga tttttctcagtgccagagcatcttaaaggaaatttctcccctcctttcaatggaagccatggcgtttgtcacagaagaaa gaaaaactgcacaagagtctacttttccaaatacatatacatttgacctatttggaggtgttgatcttctagtagaaata cttatgaggccaacatttattacacagaagaagaaacaaaagataagtgatgaccttatcaaggactgtttaagcatatt gtacaattcctgcatatgtaccgaaggagtcactaaacgattggcagaaagaaatgattttgtgctgttcttgtttacac tgatgacaaataaaaagacattcctgcaaacagccacgcttattgaagacattcttggagtgaaaaaggaaatgatccag ttagaggatattccaaatctcgccaatcttgtctccagttttgaccaacagcaactagcaaacttctgcaggatccttgc tgttacaatttcagagctcgacactggcagtgatgataaacacacactacttgctaaaaatgctcaacagaaaaaaaatt tgggtccttctcgagccgaaataaatcaagctacccttctcaatataccaggtttcattgaacgactgtgtaaactagca acccgaaaagtatcagaaacaacaggaacttccagttttcttcaagagctggaggagtggtacacctggctagacaatgc tttagttcttgatgcactaatgcgtgtggcagatgaagaaacagagcaaagtagcacagaatcttcagatgagagtggat ttgccaatacctcaacgaggaatcagcttcctcaatccatgaaaattatgcatgaaattatgtataaattggaagtttta tatgtgctttgtgtgcttttaatgggaagacaaagaaatcaggttcataaaatgattgctgaatttagactgatccctgg ccttaataatttatttgataaattaatatggcggaaacattctgcatcggcccttgttttgcctgggcacaatcagaact gtgactgtagcccggatattaccttgaagattcagtttttgagactacttcagagttttagtgatcatcatgagaacaag tatctacttttaaacagtcaagaacttaatgaattgagcgcaatctctctaaaagccaacatccctgaggttgaggctgt tgtcaacacagacagaagtttaatttgcgatgggaaaagaggcttgctaaccagacttcttcaggtaatgaagaaagaac cagcagaatcgtcattcagattttggcaagcaagggcagttgaaagtttcttacgaggtgctacttcctatgcagatcag atgttcttgctaaaaagggggcttttagagcatattctgtactgcattgttgacagtgaatgcaaatcacgagatgtgct tcaaagttattttgatcttctgggggaactgatgaaattcaacatagacgctttcaagagatttaataagtacatcaaca cagaggaaaagtttcagatatttttgaatcagatcaacagttcactggttgattccaacatgttggttcgttgtattact ttatccctggatcgatttgagagccagtcagatattaaagttgcagaagtcttgtctgagtgccgcctcttgtcatacat gtcacagatgtccatgaggatgtcctttcttttccgactcattaatattattcatgtacaaacactgacccaggaaaacg taagttgtctgaacacaagtctagttatcttaatgttagctcgaagaaaagacaagctcccattctatctgcgtaccctt caagagatggaatatacaaagaaatatcctggtttcatcctgaacaattttcatagtcttcttcgtttctggcagcagca ttacctcaataaggacaaggacagcacctgtttagaaaatagttcatgtattagtttttcctattggaaagagactgtgt ctgttctgcttagtaccgatcggacatcaccttgtgccataattagctacattgatgaggcatacatggatattgacaga gacttcaccgaagagtaattccaccggttctcacttccagtggacaatacctcagagggaatcttgcagacgttggattt tcagggatatgctgtgtgcacaaacttagaactatggaatattactatcttaatgtattttctccccttgccccaccacc ctctttaaagagcaagatttcacaaacttgaaacgtatcacatattcagggaaatctgcatactgtttggaattgtctgc aaaaaggtccactttcccctgctcattatgactagaagcctttgagcttgggaggtgggatctttccaatatgcaagggt tagctgtgattttctttctggtaacccaaattagaagttaaaaggagaggtaattccctaagtcattgaaacaagctggt tttatgagcacacctaaggtacaccagccactattaagtcatcataaaaagttgattcctaattcttcacatctttttct ttgttttgcatttcaagaggatcgtgtgtgcaattcacttttaaatacataaaaataatggcttgtccttttttctgcaa atgattttagaaatgtttcgtactaaactgtcccattctcttctttggttcactgtattattgcattcaacagtattttt ctctgctctgtggatttgtcttcaatggacttttacagtgctgtctagaacaggtatatattgcagtgatggaagtagtt ggcttttttcccctggctttttttgtttgtttgcttgtttattaggttttcagatacaatcacgggaaaaacaaggaaga ataaaaagaacacaaaggaaagattttacttagaggttttgtaaaattaaccaaataaatttcctcatgacattgatata aatctatgtatagttttaagaatattaaaattagctttttatgaaataattaacagtaactaatatgaatcaaattgtaa ttaaaaaatcctataatttctgcctgatctaacaaatgtgaatttaacagatcataaaaagattaagtattagtctaata tatagatttatatcaaaatatttttgaaacattttaattaattttacaatgctttcaggtctccttttcatctccttttt cttttcttgtattgttccctttgattgtatctgtaaatctaatagacaaaaaagggaaggataacaaatacattaaaaat ttatggattttttttctaaattctgcagtctggccattttgttcataatgcaaatggaattttctttcagagtactatat tgcttttgctgaatattaaacctattgttgaacagaaaggtgtactaatttgcactgtggaaacagaggcgccagctaaa gtgaaagaattagcaccatccgttctgatgtgtatgtgcccacacactcacacaccagaacaatatatatatatatataa tataatatatattgttcttaatgtgtaatagtaactggaagttgtctagtctactattgatacttacttgtatttcgggt gaattattcagtaaatattgaacttgctgttgtaactgccagtgtttaaacaaattagttgaaagacagctggtgtttga ttccagaaactttttttttttttgaataaaagcttcatttcatcattgtgctcaggcactttatggaatttatgaagcat tagaacagccctttttgtccttagctttcaactattcttatgtatgcatttataattttataacattttatcttaaacag atccctaataagcctcaagttaaaaatgtcaagaagatatcttggttgtattctgttaaaatttatccttcaaagcataa catttttattagaattggccattagaaatgtaattagaaatgtaataatagcaagacatctccatgaaacctacaatatt tgaaagtaagatacagttgatcagctattcccccattcacatttgctctgcacacgctattgcaccttattttggggcaa aagtaatagaaataacagatctctggtggttgatttgcatacaaaattattaaggtatttactggggacaaagacagtgt ccactttttttatgataagagccctgtcaagaaagcctgactgctccgtaattatctaattgtgaatctattacctgaac aaaacagcactttattaaggctatccctattgttttatcctttacagcttgtcagaaataaaatggaaactttggagtaa atcatgtatcttgctttaaagaaacctcttaaggatatgtttaaactgactttcccagtggccctgtattccgttataca tctgatgcctttggagaatgtcattcaagaattttagtttgggataaattttgagagagtcaattgcttctacaacatcc ccatcctcagtcctaggtcattgtagtgactctgcaattatagtaaacataaagactcaaatgcctgtggattccttttg attagaactgaaacatcaggaccgtatggccatcgtctacaaaaatgaattctaagtatctaattcatacatatgtcttg cctttgaatgaccatccttctttttactaatcaatttggctttcagtgagacttctctcactaaaaaacaaaaatactta ctgtagctactccaaggatgatttacctatcatgctgtgtatttatttctgacttttcagtgtaggcaattccaaagtgt tgggttggaggttttggctcagggtatattattggccttttggttccttacagggacacatgagtgcccatgttcctctt ccacagctactgctgtagatcatctttgtgtatgatgagaaactacaatagccttggattaagtataaattgtgtggagg agtaatagctggcaaatcacatttatatgtggctataaaaaaaaagggaaatcgctgaaggaatggaactgttttgtggc aaaaaggcgactcccctagccagcaaatgtttctggaaattttaattatttcacacaaattaatgttcatgctgcccaga ttaatactgactgactaacaccacataaatgtattaaatggaataaagaattctattttaaaacatgtc |
|
Protein
| Protein ID | habu1_s3274_g11247.t1 |
|---|---|
| Definition | - |
>habu1_s3274_g11247.t1 MASTIGGAGAALLALPPAADPVSCTPGRREAKRGPINILAQLRHAQLSGRGLTRGSQITGALLKERDKQAKWNGIPMLLQ KLYETSHANSDFSQCQSILKEISPLLSMEAMAFVTEERKTAQESTFPNTYTFDLFGGVDLLVEILMRPTFITQKKKQKIS DDLIKDCLSILYNSCICTEGVTKRLAERNDFVLFLFTLMTNKKTFLQTATLIEDILGVKKEMIQLEDIPNLANLVSSFDQ QQLANFCRILAVTISELDTGSDDKHTLLAKNAQQKKNLGPSRAEINQATLLNIPGFIERLCKLATRKVSETTGTSSFLQE LEEWYTWLDNALVLDALMRVADEETEQSSTESSDESGFANTSTRNQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVH KMIAEFRLIPGLNNLFDKLIWRKHSASALVLPGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNSQELNELSAIS LKANIPEVEAVVNTDRSLICDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGATSYADQMFLLKRGLLEHILYCI VDSECKSRDVLQSYFDLLGELMKFNIDAFKRFNKYINTEEKFQIFLNQINSSLVDSNMLVRCITLSLDRFESQSDIKVAE VLSECRLLSYMSQMSMRMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKDKLPFYLRTLQEMEYTKKYPGFILNN FHSLLRFWQQHYLNKDKDSTCLENSSCISFSYWKETVSVLLSTDRTSPCAIISYIDEAYMDIDRDFTEE |
|