Gene
| Gene Model ID | habu1_s3443_g11711 |
|---|---|
| Locus | habu1_scaffold3443 : 244156 ... 248016 : + |
| To GenomeBrowser | habu1_scaffold3443:244156..248016 |
| Genes list of scaffold | habu1_scaffold3443 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3443_g11711.t1 | 1 | 1 | FAM195 | 2 | 94 | 9.8e-25 | 86.3 | 1.4e-28 | 1.1e-24 | 86.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3443_g11711.t1 | gi|507681398|ref|XP_004639538.1| | PREDICTED: protein FAM195B [Octodon degus] | 0.0 |
| habu1_s3443_g11711.t1 | gi|507543403|ref|XP_004655692.1| | 0.0 | |
| habu1_s3443_g11711.t1 | gi|532014301|ref|XP_005350927.1| | PREDICTED: protein FAM195B isoform X1 [Microtus ochrogaster] | 0.0 |
| habu1_s3443_g11711.t1 | gi|354469134|ref|XP_003496985.1| | PREDICTED: protein FAM195B [Cricetulus griseus] | 0.0 |
| habu1_s3443_g11711.t1 | gi|533188755|ref|XP_005407312.1| | PREDICTED: protein FAM195B isoform X1 [Chinchilla lanigera] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 25.0 |
| Venom grand-1 | 40.4 |
| Pit, infrared sensing | 29.3 |
| Nose | 27.5 |
| Brain-1 | 18.0 |
| Eye | 21.8 |
| fetal fibroblast | 31.8 |
| venom gland-2 | 35.7 |
| Brain-2 | 19.6 |
| Spleen | 39.4 |
| Lung | 40.5 |
| Liver | 89.0 |
| Kidney | 50.6 |
| Pancreas | 92.2 |
| Small intestine | 64.0 |
| Large intestine | 35.0 |
| Stomach | 46.0 |
| heart | 29.6 |
| ovary | 4.6 |
| cheek muscle | 37.0 |
Transcript
| Transcript ID | habu1_s3443_g11711.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11711.t1 ggtgctgaactgaccccgcacagcatcaccaacctatccttccaatacctgggccagggctgggcaagaggcagccatga caagctcccctgtttccagagtagtttacaatggcaagagaaacagcagtcctcgctccccaagcaacagcagtgagatc ttcactcctgcacatgaggagaatgtgcgtttcatctatgaagcctggcaatctgtggagcgggatctccgcagtcaaat ggcgggtggtgaacgggttcttgtagaggaatatgtggagaaggtaccaaatccaagtttgaaggcattcaaacctgttg acttgagcgacctaaagcgacgaaacacacaggactcaaagaaatcctaaagtgacttgggctggcccagccccagtgtt ggcatgtggccactggtacatgaatttgataactttgtgttggtttcctccttaggtctggattgtgcctggggctggct ctgaatttcctaggaaggattggctttctgccttcccttctcagcattccctggcctgggctgccttttcttcattctag aattgagcccaggagttccttttccttagtaaatgacattttaatctgacgatag |
|
Protein
| Protein ID | habu1_s3443_g11711.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11711.t1 MTSSPVSRVVYNGKRNSSPRSPSNSSEIFTPAHEENVRFIYEAWQSVERDLRSQMAGGERVLVEEYVEKVPNPSLKAFKP VDLSDLKRRNTQDSKKS |
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