Gene
| Gene Model ID | habu1_s3443_g11713 |
|---|---|
| Locus | habu1_scaffold3443 : 343685 ... 360375 : - |
| To GenomeBrowser | habu1_scaffold3443:343685..360375 |
| Genes list of scaffold | habu1_scaffold3443 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial dicarboxylate carrier | GO:0005743 GO:0015291 GO:0016021 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3443_g11713.t1 | 3 | 1 | Mito_carr | 9 | 89 | 0.0 | 189.0 | 8.2e-21 | 1.2e-16 | 60.1 |
| habu1_s3443_g11713.t1 | 3 | 2 | Mito_carr | 96 | 188 | 0.0 | 189.0 | 1.2e-20 | 1.8e-16 | 59.5 |
| habu1_s3443_g11713.t1 | 3 | 3 | Mito_carr | 197 | 281 | 0.0 | 189.0 | 6.4e-23 | 9.4e-19 | 66.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3443_g11713.t1 | gi|641760385|ref|XP_008165929.1| | PREDICTED: mitochondrial dicarboxylate carrier [Chrysemys picta bellii] | 0.0 |
| habu1_s3443_g11713.t1 | gi|327265154|ref|XP_003217373.1| | PREDICTED: mitochondrial dicarboxylate carrier isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s3443_g11713.t1 | gi|564263707|ref|XP_006270712.1| | PREDICTED: mitochondrial dicarboxylate carrier [Alligator mississippiensis] | 0.0 |
| habu1_s3443_g11713.t1 | gi|637268433|ref|XP_008102807.1| | PREDICTED: mitochondrial dicarboxylate carrier isoform X3 [Anolis carolinensis] | 0.0 |
| habu1_s3443_g11713.t1 | gi|512879080|ref|XP_004894605.1| | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.4 |
| Venom grand-1 | 3.7 |
| Pit, infrared sensing | 3.9 |
| Nose | 5.0 |
| Brain-1 | 2.7 |
| Eye | 3.5 |
| fetal fibroblast | 9.2 |
| venom gland-2 | 7.5 |
| Brain-2 | 3.2 |
| Spleen | 3.5 |
| Lung | 4.1 |
| Liver | 24.3 |
| Kidney | 97.8 |
| Pancreas | 7.1 |
| Small intestine | 8.0 |
| Large intestine | 16.5 |
| Stomach | 11.6 |
| heart | 5.6 |
| ovary | 43.8 |
| cheek muscle | 1.8 |
Transcript
| Transcript ID | habu1_s3443_g11713.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11713.t1 aggcggaggggagggatcagcgaacgcacgtatcgcctgcaggatggcggagaaacgcgtgtcccgctggtacttcgggg gcctggcctcttgcggggctgcgtgctgcacgcatcctctggatttactcaaggttcatctgcaaactcagcaggaagtg aagctgcgcatgacagggatggctctacgtgtgattcacaacgatggttttctagctctctacaatgggctcagtgcctc gctttgccgacaaatgacgtattctctcacccgctttgccatctatgagacggtgcgagacagcttgagccagggtgccc agggtccaatgcccttctaccagaaggttctgctgggtgcagtaggaggatttactggtggattcgtagggactccggct gacatggtgaatgtcagaatgcagaatgacattaagcagccggcacacctgcgacgcaactactcccatgccctggatgg cctgtatcgggtgtttcgtgaagagggtgtgaagaagttgttctcaggaggaacaatggcatcgagcagaggagccttgg ttaccgttggacagctcgcttgctatgaccaggcaaagcagttggttcttgggactggtttactcgctgacaatattttt actcatttcctggccagttttattgccggaggatgtgctacatttctgtgtcagcccttggatgtgctaaaaacacgact tatgaattcccaaggcgaatatcggggtgtcctgcactgtgcagtggagacggccaggcttgggccattggctttttata agggccttgttcctgccggcattcgcttggtccctcatactgtgctcacctttgtcttcctggagcaactacgcaaatac tttggcattaaagtaatgacctaaaggagaagagacctgttagagtaaaaaaaagatggggaacaaggactacagagtcc cagaatggctgggtgacatattctttccctccttgaggggcagagcctgtttaatgaaacgattttgggatgcctattga ttttatcctccaccagcttatgggagggttgctggccacgttcagtgtgccattctgggggagattaccttgtcaactcc aagaatcagagccaatgatcagcactttaggaatcacgaaaataaaatgattgtgcaaagcaggtgtt |
|
Protein
| Protein ID | habu1_s3443_g11713.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11713.t1 MAEKRVSRWYFGGLASCGAACCTHPLDLLKVHLQTQQEVKLRMTGMALRVIHNDGFLALYNGLSASLCRQMTYSLTRFAI YETVRDSLSQGAQGPMPFYQKVLLGAVGGFTGGFVGTPADMVNVRMQNDIKQPAHLRRNYSHALDGLYRVFREEGVKKLF SGGTMASSRGALVTVGQLACYDQAKQLVLGTGLLADNIFTHFLASFIAGGCATFLCQPLDVLKTRLMNSQGEYRGVLHCA VETARLGPLAFYKGLVPAGIRLVPHTVLTFVFLEQLRKYFGIKVMT |
|