Gene
| Gene Model ID | habu1_s3443_g11716 |
|---|---|
| Locus | habu1_scaffold3443 : 384136 ... 393318 : + |
| To GenomeBrowser | habu1_scaffold3443:384136..393318 |
| Genes list of scaffold | habu1_scaffold3443 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| adp-ribosylation factor-like protein partial | GO:0000166 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3443_g11716.t2 | 1 | 1 | Arf | 30 | 162 | 2.2e-22 | 79.1 | 8.9e-26 | 2.6e-22 | 78.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3443_g11716.t2 | gi|327264764|ref|XP_003217181.1| | PREDICTED: ADP-ribosylation factor-like protein 16 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s3443_g11716.t2 | gi|591377548|ref|XP_007063435.1| | PREDICTED: ADP-ribosylation factor-like protein 16 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.1 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 1.1 |
| Nose | 3.2 |
| Brain-1 | 2.1 |
| Eye | 1.9 |
| fetal fibroblast | 0.9 |
| venom gland-2 | 0.7 |
| Brain-2 | 2.0 |
| Spleen | 0.5 |
| Lung | 1.0 |
| Liver | 0.6 |
| Kidney | 2.5 |
| Pancreas | 0.4 |
| Small intestine | 0.3 |
| Large intestine | 0.3 |
| Stomach | 0.2 |
| heart | 0.8 |
| ovary | 1.9 |
| cheek muscle | 0.7 |
Transcript
| Transcript ID | habu1_s3443_g11716.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11716.t1 aagcggggctcgtgggtcaaaggcagacgaagttgagcagggcctggcgaggaagggaaaaggaaaggagcgaggaggtg ctttgaccaaggagataatcatctttgagaaataattccataattcccagataagcacaggtgatggaagacgtctgaga gtattggtttgagaaaggctattctggaaaaattcaatcccacctgtatcttactgtattgaatgttattctttcctacc atcttccttaatggctttttgatacagctgagctccaaggatggggccaaggaccttggagaaccaccagctactttgcc aacgtatatgattgatgctgccaatcctactcagatttccgcatcctgtgtccagcttctgtccctcctttctgctgaac agctaacatcggttcccgtcctcctcattttcaacaaaattgacttaccatgctacatgtccctggtggagatgaagtca ttattccgaatccaagatatcattgcttgtgccaaacaggttatcactgtggtcgagatcagtgcacgggacggcagggg cttatctgatgtaatgaagtggttgcaatccaccctgcatgattgaagttggaatctggaaatgccaagaagctgaagcg tttcctgcaagcagcggaacaacattgccatcacaaactttgatgtagaaatatgtcatttaaattattcagtggattgc ctcttaactggcaaattggatggttgctactgcatgtagatgcattgaaagggaatattgaagctgctaacggtaagcac agtaatcatatacagcattgtatgattttctctaggtattggtacagatgaaataattacaagtaaacatgctgtaacag aggaaccaatcaggttttgtaggcaacatgaagtttaatttcacacaaagtttctatgctttgtattattttctggtcca cgaaatcagatctgatggaagtacaaagcaaacaaattcctgttctataacacacgagagattcaggttgctcaagtctg agcatcttattcaagagtttgtgtgcatagtctcttgtgtttcagttgtcagtagtttaactattttctacaacaacagt gatctaactctgagaaccaaaaattcgtagtcctaccaaatattaacttgacaggctttagcacagtggttctcaacctt tttaatgccgcgacccccaaccggtcgtaagtcgaggactaaaccggt |
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| Transcript ID | habu1_s3443_g11716.t2 |
| Definition | - |
>habu1_s3443_g11716.t2 aagcggggctcgtgggtcaaaggcagacgaagttgagcagggcctggcgaggaagggaaaaggaaaggagcgaggaggtg ctttgaccaaggagataatcatctttgagaaataattccataattcccagataagcacaggtgatggaagacgtctgaga gtattggtttgagaaaggctattctggaaaaattcaatcccacctgtatcttactgtattgaatgttattctttcctacc atcttccttaatggctttttgatacagctgagctccaaggatggggccaaggaccttggagaaccaccagctactttgcc aacggtaggcacaaatcttaccgatctctcaataggaaagaagatcacagttcgagagctaggaggctgcatgggtccta tctggtccagttactatagtgactgccatgctgtcctgtatatgattgatgctgccaatcctactcagatttccgcatcc tgtgtccagcttctgtccctcctttctgctgaacagctaacatcggttcccgtcctcctcattttcaacaaaattgactt accatgctacatgtccctggtggagatgaagtcattattccgaatccaagatatcattgcttgtgccaaacaggttatca ctgtggtcgagatcagtgcacgggacggcaggggcttatctgatgtaatgaagtggttgcaatccaccctgcatgattga agttggaatctggaaatgccaagaagctgaagcgtttcctgcaagcagcggaacaacattgccatcacaaactttgatgt agaaatatgtcatttaaattattcagtggattgcctcttaactggcaaattggatggttgctactgcatgtagatgcatt gaaagggaatattgaagctgctaacggtaagcacagtaatcatatacagcattgtatgattttctctaggtattggtaca gatgaaataattacaagtaaacatgctgtaacagaggaaccaatcaggttttgtaggcaacatgaagtttaatttcacac aaagtttctatgctttgtattattttctggtccacgaaatcagatctgatggaagtacaaagcaaacaaattcctgttct ataacacacgagagattcaggttgctcaagtctgagcatcttattcaagagtttgtgtgcatagtctcttgtgtttcagt tgtcagtagtttaactattttctacaacaacagtgatctaactctgagaaccaaaaattcgtagtcctaccaaatattaa cttgacaggctttagcacagtggttctcaacctttttaatgccgcgacccccaaccggtcgtaagtcgaggactaaaccg gt |
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Protein
| Protein ID | habu1_s3443_g11716.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11716.t1 MLFFPTIFLNGFLIQLSSKDGAKDLGEPPATLPTYMIDAANPTQISASCVQLLSLLSAEQLTSVPVLLIFNKIDLPCYMS LVEMKSLFRIQDIIACAKQVITVVEISARDGRGLSDVMKWLQSTLHD |
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| Protein ID | habu1_s3443_g11716.t2 |
| Definition | - |
>habu1_s3443_g11716.t2 MLFFPTIFLNGFLIQLSSKDGAKDLGEPPATLPTVGTNLTDLSIGKKITVRELGGCMGPIWSSYYSDCHAVLYMIDAANP TQISASCVQLLSLLSAEQLTSVPVLLIFNKIDLPCYMSLVEMKSLFRIQDIIACAKQVITVVEISARDGRGLSDVMKWLQ STLHD |
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