Gene
Gene Model ID | habu1_s3443_g11717 |
---|---|
Locus | habu1_scaffold3443 : 395608 ... 403185 : - |
To GenomeBrowser | habu1_scaffold3443:395608..403185 |
Genes list of scaffold | habu1_scaffold3443 |
Annotation by Blast2GO
Annotation | GO |
---|---|
transmembrane channel-like protein partial | GO:0005783 GO:0005794 GO:0016021 GO:0031965 GO:0070062 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s3443_g11717.t1 | gi|602644232|ref|XP_007428569.1| | PREDICTED: transmembrane channel-like protein 6-like [Python bivittatus] | 0.0 |
habu1_s3443_g11717.t1 | gi|637266459|ref|XP_008102416.1| | PREDICTED: transmembrane channel-like protein 6 [Anolis carolinensis] | 0.0 |
habu1_s3443_g11717.t1 | gi|701294656|ref|XP_010007457.1| | PREDICTED: LOW QUALITY PROTEIN: transmembrane channel-like protein 6, partial [Nestor notabilis] | 0.0 |
habu1_s3443_g11717.t1 | gi|704293957|ref|XP_010160681.1| | PREDICTED: transmembrane channel-like protein 6, partial [Caprimulgus carolinensis] | 0.0 |
habu1_s3443_g11717.t1 | gi|699647526|ref|XP_009879596.1| | PREDICTED: transmembrane channel-like protein 6 [Charadrius vociferus] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 8.4 |
Venom grand-1 | 3.6 |
Pit, infrared sensing | 4.8 |
Nose | 9.9 |
Brain-1 | 0.5 |
Eye | 1.6 |
fetal fibroblast | 0.7 |
venom gland-2 | 3.0 |
Brain-2 | 1.2 |
Spleen | 9.1 |
Lung | 4.6 |
Liver | 0.9 |
Kidney | 4.2 |
Pancreas | 22.7 |
Small intestine | 2.4 |
Large intestine | 5.7 |
Stomach | 7.9 |
heart | 0.8 |
ovary | 26.0 |
cheek muscle | 1.4 |
Transcript
Transcript ID | habu1_s3443_g11717.t1 |
---|---|
Definition | - |
>habu1_s3443_g11717.t1 cgggagttggggacccctgaaataagcaatataacatttctcttcttcatctttttaatttttttcctaggctgggggtc ttctttgccccacttcttcctgtggtccaaatcctcaaattactgctcttgttctatgttaagaaggtcagcttgatgag aaattgtcagtgtcccagtaaaccctggcgtgcatctcatatgagcaccatcttcatctctttgttgtgcttcccttcat tcctgggtgcctccatattcctctcctataccatctgggcaataaaaccatcagaaatgtgtggaccttttcaaactttt gataccatctacgattcttggaaggtatgggtactaaagctggaagaatccaattcaaatattacttggtttacctggat ccatcaaaacctcttccaaacttcctacttcctgttgttaatcactgcaattttggttgcagttatctacttcaccattg agatggtaaagggtctgcagagtatcatttcaatactgaaggggcagattgccaatgaaagagaagacaagaagtttctc attcaaagacttcatgttatatatgaaaaatgaaaagtacaacaggatgaaaatgagatccatttttccttagcatcttt accagcgaatgtaccaggtgagccttaccctgaaggacttcttagaaaagaaaaatagatatggggctatccagaaaagt tttgatgaacacattcaggctgctgaagatactgactcccttcactcctgcatgtgaatgtcatctacctttggttgaag aagttacagcatattcttaacattggctggccatttcagtttctgtcttcagccaaatggaaactttccagaaccagact aagagctcccagactatctcaagatttttacagacgatttttataacagagaattcaaactgatattttataatgtgcaa tggtctgaagtattttgtcttgccaggattatgagatccatgacctcatgtggagagtgtacagttactggaaagaaatt tttcttacaaaggacctcatggtttaatattaataaaaatgacttgtcttaagggagta |
Protein
Protein ID | habu1_s3443_g11717.t1 |
---|---|
Definition | - |
>habu1_s3443_g11717.t1 MSTIFISLLCFPSFLGASIFLSYTIWAIKPSEMCGPFQTFDTIYDSWKVWVLKLEESNSNITWFTWIHQNLFQTSYFLLL ITAILVAVIYFTIEMVKGLQSIISILKGQIANEREDKKFLIQRLHVIYEK |