Gene
| Gene Model ID | habu1_s3443_g11718 |
|---|---|
| Locus | habu1_scaffold3443 : 403645 ... 429835 : - |
| To GenomeBrowser | habu1_scaffold3443:403645..429835 |
| Genes list of scaffold | habu1_scaffold3443 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane channel-like protein 6 isoform x1 | GO:0012505 GO:0016021 GO:0043231 GO:0044444 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3443_g11718.t2 | 1 | 1 | TMC | 553 | 617 | 1.8e-20 | 73.3 | 1.2e-24 | 1.8e-20 | 73.3 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.5 |
| Venom grand-1 | 1.3 |
| Pit, infrared sensing | 2.2 |
| Nose | 4.9 |
| Brain-1 | 0.3 |
| Eye | 0.9 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 1.9 |
| Brain-2 | 0.6 |
| Spleen | 5.2 |
| Lung | 3.0 |
| Liver | 1.0 |
| Kidney | 3.0 |
| Pancreas | 12.7 |
| Small intestine | 1.1 |
| Large intestine | 2.6 |
| Stomach | 3.8 |
| heart | 0.5 |
| ovary | 23.2 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s3443_g11718.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11718.t1 gcgtcagaaaaaaaaagaactacagctcccagagtcctttgttgttcaggtgaagcacagggtgtgttctagccgccggg actggggtttcctttggagaaaaagttttcttggtgtgaaaaggagcgctttacctgattaaacctggaagaataactcg caaggaatgcaggaactgggttttactagcccttggaagcctagcccatcctagtgtattgaaatgcagagttacttatc tccctagtgacagctgggctgcttgacaaggattggagacggtcaggagaaactttatgttaagtctcctggtagtggaa gcaagagatgcacctgcaggcttgaatgttgtgtcctgctgttctctgatcttgagagggaataagaagacatcagatat tagaccacagtctaaagaatttgttagaagatgtggagcctgaattgtctcactggaaccagcttcgtgtgacattgatt cttcccgtaacctgcatttggaaatgtggtggaactgaaaagtgcaaaggccagcaaattacttgtggagttatttatca aaatgtcccacacagtgactttcacctttcacgaccttgagaatggagatcctgccagccaagacccaagtccatatgat gaaggggccgtgcatgattccttccaccagctaattaaggagcagagcagtttggctgaacaagagttgatggagatgca agatctgactaacaggagcaaagaaaatctggttcctccctctgatcggactggagcttggaacccagacgcacagctgg cagagcaccctgacttctcctccaccacattgcgcatccttgccaaaatgcccagccggactattgggcacagcagagga gccatcttgtcccagtattacaactgcactgccagacgccgtcgtcggagccaccgtcctcctctccaggaagtatcccg ttctgcacggcctagttttcgacagctatctctagagttggattccagttacagagaagaagactccaagtatagtttgc tggtcaaagaacttcagaacctgccggtacatcaacggaatcacatgctgcagatgatgcctctaagcttggctgagaag cgcagactcaggcagaattcaagtgggcattcaggcaccttgaggaaacccaagccaacgggtcgcttgtcttactgcag ctggattaaataccacatcctaataggcttccggaatttttggtacaatctgctgtccctcattcctgttctccagccct ggcattattccctcaaggagatcggcggccgctttggctctagtatcctctcctatttccaattccttaggacgttgctc ttcttcaatctctttatgttcctgatcctgctggtctttgtagttgttgtgcaggctgctttcccttctgtcatacctaa cagtgtggccttcacagggtttgatctcttgactggagcaggctacttcagtcacacactgatgtattacggctactata gtaatttcacgcttaatgcccctgatgctaataacacccattacaggcaacacatgcatagccagatgtcctacaatatg cctctggcctacctctttgttactggaagcgccttctttggaacctgctttctcttgatctacagtatgtctcactcctt tggggaaagttaccgtgtaggcagtgcatcaagtaatctggcagtcaaagtcttctgttcctgggattacaaaatgattc agaaacgctcaatccaactccagagtgagaacattcgcacacatttgaaggagtgtctggctgaacagaggctggaatcc tgtttaagcttttctaagaagctgcagggactcgtagtcttgctggtggcctggactgtatccctgagcactgttgcggg cactgccattggtatccactacttttctgaatatgtacaccaggttctgcacgaggagcttttgaaaaacagccacgctg ggaaagagttgttgctcctggccctgcctctggttgtgtctctcattaacttgctcatgccatatttttacaatctcctg gctgcgtgggagaaacaggaatcaccagtgctgggggtgtacgttgccattagcaggaatttaattctcaagatgatcat cttgggcctcctgtcctatcattggctgagttggaaagtgacatcttcagagattcagtgctgggaaacgtttgtggggc aagagctctaccgtctgatggtgatagatttgattttcattctcctggatgtcctctttggagagctgatatggaggatc atattggagaagaagttacaaagtaaacagaggcctgaatttgacattgctagaaatgtgctagatttgatttatggaca aaccctaacctggtgagactctttcttttccttctattggttgtttcctgctttgttccttatatatatattaaaaaaac cagttacaagcttcaaa |
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| Transcript ID | habu1_s3443_g11718.t2 |
| Definition | - |
>habu1_s3443_g11718.t2 gcgtcagaaaaaaaaagaactacagctcccagagtcctttgttgttcaggtgaagcacagggtgtgttctagccgccggg actggggtttcctttggagaaaaagttttcttggtgtgaaaaggagcgctttacctgattaaacctggaagaataactcg caaggcttgaatgttgtgtcctgctgttctctgatcttgagagggaataagaagacatcagatattagaccacagtctaa agaatttgttagaagatgtggagcctgaattgtctcactggaaccagcttcgtgtgacattgattcttcccgtaacctgc atttggaaatgtggtggaactgaaaagtgcaaaggccagcaaattacttgtggagttatttatcaaaatgtcccacacag tgactttcacctttcacgaccttgagaatggagatcctgccagccaagacccaagtccatatgatgaaggggccgtgcat gattccttccaccagctaattaaggagcagagcagtttggctgaacaagagttgatggagatgcaagatctgactaacag gagcaaagaaaatctggttcctccctctgatcggactggagcttggaacccagacgcacagctggcagagcaccctgact tctcctccaccacattgcgcatccttgccaaaatgcccagccggactattgggcacagcagaggagccatcttgtcccag tattacaactgcactgccagacgccgtcgtcggagccaccgtcctcctctccaggaagtatcccgttctgcacggcctag ttttcgacagctatctctagagttggattccagttacagagaagaagactccaagtatagtttgctggtcaaagaacttc agaacctgccggtacatcaacggaatcacatgctgcagatgatgcctctaagcttggctgagaagcgcagactcaggcag aattcaagtgggcattcaggcaccttgaggaaacccaagccaacgggtcgcttgtcttactgcagctggattaaatacca catcctaataggcttccggaatttttggtacaatctgctgtccctcattcctgttctccagccctggcattattccctca aggagatcggcggccgctttggctctagtatcctctcctatttccaattccttaggacgttgctcttcttcaatctcttt atgttcctgatcctgctggtctttgtagttgttgtgcaggctgctttcccttctgtcatacctaacagtgtggccttcac agggtttgatctcttgactggagcaggctacttcagtcacacactgatgtattacggctactatagtaatttcacgctta atgcccctgatgctaataacacccattacaggcaacacatgcatagccagatgtcctacaatatgcctctggcctacctc tttgttactggaagcgccttctttggaacctgctttctcttgatctacagtatgtctcactcctttggggaaagttaccg tgtaggcagtgcatcaagtaatctggcagtcaaagtcttctgttcctgggattacaaaatgattcagaaacgctcaatcc aactccagagtgagaacattcgcacacatttgaaggagtgtctggctgaacagaggctggaatcctgtttaagcttttct aagaagctgcagggactcgtagtcttgctggtggcctggactgtatccctgagcactgttgcgggcactgccattggtat ccactacttttctgaatatgtacaccaggttctgcacgaggagcttttgaaaaacagccacgctgggaaagagttgttgc tcctggccctgcctctggttgtgtctctcattaacttgctcatgccatatttttacaatctcctggctgcgtgggagaaa caggaatcaccagtgctgggggtgtacgttgccattagcaggaatttaattctcaagatgatcatcttgggcctcctgtc ctatcattggctgagttggaaagtgacatcttcagagattcagtgctgggaaacgtttgtggggcaagagctctaccgtc tgatggtgatagatttgattttcattctcctggatgtcctctttggagagctgatatggaggatcatattggagaagaag ttacaaagtaaacagaggcctgaatttgacattgctagaaatgtgctagatttgatttatggacaaaccctaacctggtg agactctttcttttccttctattggttgtttcctgctttgttccttatatatatattaaaaaaaccagttacaagcttca aa |
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Protein
| Protein ID | habu1_s3443_g11718.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11718.t1 MSHTVTFTFHDLENGDPASQDPSPYDEGAVHDSFHQLIKEQSSLAEQELMEMQDLTNRSKENLVPPSDRTGAWNPDAQLA EHPDFSSTTLRILAKMPSRTIGHSRGAILSQYYNCTARRRRRSHRPPLQEVSRSARPSFRQLSLELDSSYREEDSKYSLL VKELQNLPVHQRNHMLQMMPLSLAEKRRLRQNSSGHSGTLRKPKPTGRLSYCSWIKYHILIGFRNFWYNLLSLIPVLQPW HYSLKEIGGRFGSSILSYFQFLRTLLFFNLFMFLILLVFVVVVQAAFPSVIPNSVAFTGFDLLTGAGYFSHTLMYYGYYS NFTLNAPDANNTHYRQHMHSQMSYNMPLAYLFVTGSAFFGTCFLLIYSMSHSFGESYRVGSASSNLAVKVFCSWDYKMIQ KRSIQLQSENIRTHLKECLAEQRLESCLSFSKKLQGLVVLLVAWTVSLSTVAGTAIGIHYFSEYVHQVLHEELLKNSHAG KELLLLALPLVVSLINLLMPYFYNLLAAWEKQESPVLGVYVAISRNLILKMIILGLLSYHWLSWKVTSSEIQCWETFVGQ ELYRLMVIDLIFILLDVLFGELIWRIILEKKLQSKQRPEFDIARNVLDLIYGQTLTW |
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| Protein ID | habu1_s3443_g11718.t2 |
| Definition | - |
>habu1_s3443_g11718.t2 MSHTVTFTFHDLENGDPASQDPSPYDEGAVHDSFHQLIKEQSSLAEQELMEMQDLTNRSKENLVPPSDRTGAWNPDAQLA EHPDFSSTTLRILAKMPSRTIGHSRGAILSQYYNCTARRRRRSHRPPLQEVSRSARPSFRQLSLELDSSYREEDSKYSLL VKELQNLPVHQRNHMLQMMPLSLAEKRRLRQNSSGHSGTLRKPKPTGRLSYCSWIKYHILIGFRNFWYNLLSLIPVLQPW HYSLKEIGGRFGSSILSYFQFLRTLLFFNLFMFLILLVFVVVVQAAFPSVIPNSVAFTGFDLLTGAGYFSHTLMYYGYYS NFTLNAPDANNTHYRQHMHSQMSYNMPLAYLFVTGSAFFGTCFLLIYSMSHSFGESYRVGSASSNLAVKVFCSWDYKMIQ KRSIQLQSENIRTHLKECLAEQRLESCLSFSKKLQGLVVLLVAWTVSLSTVAGTAIGIHYFSEYVHQVLHEELLKNSHAG KELLLLALPLVVSLINLLMPYFYNLLAAWEKQESPVLGVYVAISRNLILKMIILGLLSYHWLSWKVTSSEIQCWETFVGQ ELYRLMVIDLIFILLDVLFGELIWRIILEKKLQSKQRPEFDIARNVLDLIYGQTLTW |
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