Gene
| Gene Model ID | habu1_s3443_g11720 |
|---|---|
| Locus | habu1_scaffold3443 : 448231 ... 453139 : - |
| To GenomeBrowser | habu1_scaffold3443:448231..453139 |
| Genes list of scaffold | habu1_scaffold3443 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| thymidine cytosolic | EC:2.7.1.21 GO:0004797 GO:0005524 GO:0005737 GO:0006206 GO:0006230 GO:0008270 GO:0016310 GO:0042802 GO:0051289 GO:0071897 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3443_g11720.t1 | 1 | 1 | TK | 19 | 190 | 0.0 | 241.8 | 0.0 | 0.0 | 241.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3443_g11720.t1 | gi|602644230|ref|XP_007428568.1| | PREDICTED: thymidine kinase, cytosolic [Python bivittatus] | 0.0 |
| habu1_s3443_g11720.t1 | gi|608788331|ref|NP_001278322.1| | thymidine kinase, cytosolic [Anolis carolinensis] | 0.0 |
| habu1_s3443_g11720.t1 | gi|226838235|gb|ACO83358.1| | thymidine kinase 1 [Anolis carolinensis] | 0.0 |
| habu1_s3443_g11720.t1 | gi|530578343|ref|XP_005283101.1| | PREDICTED: thymidine kinase, cytosolic [Chrysemys picta bellii] | 0.0 |
| habu1_s3443_g11720.t1 | gi|53933295|ref|NP_990229.1| | thymidine kinase, cytosolic [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.0 |
| Venom grand-1 | 0.6 |
| Pit, infrared sensing | 1.7 |
| Nose | 1.7 |
| Brain-1 | 0.0 |
| Eye | 0.2 |
| fetal fibroblast | 24.5 |
| venom gland-2 | 0.7 |
| Brain-2 | 0.2 |
| Spleen | 1.8 |
| Lung | 0.7 |
| Liver | 0.6 |
| Kidney | 0.9 |
| Pancreas | 0.1 |
| Small intestine | 0.5 |
| Large intestine | 1.3 |
| Stomach | 0.5 |
| heart | 0.6 |
| ovary | 46.6 |
| cheek muscle | 2.5 |
Transcript
| Transcript ID | habu1_s3443_g11720.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11720.t1 gcgcgcccgaaaaatgccgccttccggggattctactttggagcgcggcaatcggcgggacgcagtcggcactatgagtt gcatgatgatgccgagagtgcaaccaggatccccgcacaaggcccgcggccagatacaggtcatctttggacccatgttc tctggaaaaagcactgaactgatgcgccgagtccgtcgatttcaaattgcacagtataaatgtctactaatcaagtatgc gaaagacacacgctattgtgtcaatggagtctccacacatgacagaaacaccatggaggccatgtcagcttgttgcctca aagatgtccagcaggaggctctgaattccactgtgattggcattgatgaaggccagttttttccagatatagttgaattt tgtgagacaatggccaatgcagggaagactgtcattgtggcagcccttgatggaacatttcagaggagggcttttgggaa catcttacaactagtccccttagcagaaagtgtggtgaaacttaacgcggtttgtatggagtgttttcatgaggcctctt acactaaaaggctgggaacagagaaagaggtagaagtaataggaggggcagacaaatatcactcagtctgccgggtctgc tatttcaaaaaccgacaacacttggtatccgaaaacaaagagaacctactgggtgggaataaacccctggatatgaatgc ctccaggaaagtcttggctacccgtcagatcatgcagtggaatccatccagttgaacaaaggaagagcagaaatattaac ttctgttgtggaaactgaagcgttggttttaatcaatgatatattgaataaaattattcttacttttaggtttt |
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Protein
| Protein ID | habu1_s3443_g11720.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11720.t1 MSCMMMPRVQPGSPHKARGQIQVIFGPMFSGKSTELMRRVRRFQIAQYKCLLIKYAKDTRYCVNGVSTHDRNTMEAMSAC CLKDVQQEALNSTVIGIDEGQFFPDIVEFCETMANAGKTVIVAALDGTFQRRAFGNILQLVPLAESVVKLNAVCMECFHE ASYTKRLGTEKEVEVIGGADKYHSVCRVCYFKNRQHLVSENKENLLGGNKPLDMNASRKVLATRQIMQWNPSS |
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