Gene
| Gene Model ID | habu1_s3443_g11723 |
|---|---|
| Locus | habu1_scaffold3443 : 482340 ... 529162 : + |
| To GenomeBrowser | habu1_scaffold3443:482340..529162 |
| Genes list of scaffold | habu1_scaffold3443 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane protein 235 | GO:0044425 GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3443_g11723.t2 | 1 | 1 | PMP22_Claudin | 22 | 158 | 5.6e-06 | 26.1 | 1.2e-09 | 9.2e-06 | 25.4 |
| habu1_s3443_g11723.t2 | 1 | 1 | Claudin_2 | 23 | 164 | 5.4e-18 | 65.2 | 1.0e-21 | 7.5e-18 | 64.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3443_g11723.t2 | gi|637266425|ref|XP_008102406.1| | PREDICTED: transmembrane protein 235 isoform X2 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.2 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 1.2 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s3443_g11723.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11723.t1 aagctttataaatattttggatacttctgagatgttttagcgctggttagctttcacttcagacacttctcggctcctgc tctcgccgtgctggaggcgggatcatggtatggaagtgcggggcggctctgtcccccggcacgctctgcctggccgctgc gctcaatgggctactcagcttcggcttcttggctgcggccatcggcaccgactactggtacttgatccacgtggatgggg ctgggcgcaacggcagcgctcgggatggcgagcaactgagttctcactccgggctctggcgactctgcgaaggacaaaat gcctgtatgcccctgatcgacccctttggcgcagagagttggctggtgccggcatcactccagcatcttatctgaagcaa gaatgattctcagtcaaaactgatcttgatgcaaagagttttggagaacattggagctattggccttcagacctacaaac cagctgttttccctcatcctgctgagataggattggccttagcaaaatggttttgccttctgcctgtcagccttcccatt gatgagcttgaaggagtattgactggctctcttggtaatctcaacatgttccctgcatttcaaggttggcagcagtggag atgattgcagacagaaactggggatttctcacaaaggaggaatttcttgcaaaaggagaacagaaagtgataaccatgga tttttttttttagttcaaactgagcactgacaagccatacaggtgtgtgtcccacagaaaagcctatctagttttgggaa gtatgtagattctgagcgtagtacgagtcctcaacttacaacag |
|
| Transcript ID | habu1_s3443_g11723.t2 |
| Definition | - |
>habu1_s3443_g11723.t2 aagctttataaatattttggatacttctgagatgttttagcgctggttagctttcacttcagacacttctcggctcctgc tctcgccgtgctggaggcgggatcatggtatggaagtgcggggcggctctgtcccccggcacgctctgcctggccgctgc gctcaatgggctactcagcttcggcttcttggctgcggccatcggcaccgactactggtacttgatccacgtggatgggg ctgggcgcaacggcagcgctcgggatggcgagcaactgagttctcactccgggctctggcgactctgcgaaggacaaaat gcctgtatgcccctgatcgacccctttggcgcagagagttggctggtgccggcatcactccagcatcttatctacatgca tcgagccttcatggtcttgctgccactcagtctcatcttgattatttttggctggatctgtgggatcattggcttcttgg cccagatttcctggcttctgctcttcacaggctgctattttctattgggtgcactcctgactctgtcagggacaagcacc tatatctgctactccaaagcagcattcattgagactgccttagcaaaatggttttgccttctgcctgtcagccttcccat tgatgagcttgaaggagtattgactggctctcttggtaatctcaacatgttccctgcatttcaaggttggcagcagtgga gatgattgcagacagaaactggggatttctcacaaaggaggaatttcttgcaaaaggagaacagaaagtgataaccatgg atttttttttttagttcaaactgagcactgacaagccatacaggtgtgtgtcccacagaaaagcctatctagttttggga agtatgtagattctgagcgtagtacgagtcctcaacttacaacag |
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Protein
| Protein ID | habu1_s3443_g11723.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11723.t1 MVWKCGAALSPGTLCLAAALNGLLSFGFLAAAIGTDYWYLIHVDGAGRNGSARDGEQLSSHSGLWRLCEGQNACMPLIDP FGAESWLVPASLQHLIXSKNDSQSKLILMQRVLENIGAIGLQTYKPAVFPHPAEIGLALAKWFCLLPVSLPIDELEGVLT GSLGNLNMFPAFQGWQQWR |
|
| Protein ID | habu1_s3443_g11723.t2 |
| Definition | - |
>habu1_s3443_g11723.t2 MVWKCGAALSPGTLCLAAALNGLLSFGFLAAAIGTDYWYLIHVDGAGRNGSARDGEQLSSHSGLWRLCEGQNACMPLIDP FGAESWLVPASLQHLIYMHRAFMVLLPLSLILIIFGWICGIIGFLAQISWLLLFTGCYFLLGALLTLSGTSTYICYSKAA FIETALAKWFCLLPVSLPIDELEGVLTGSLGNLNMFPAFQGWQQWR |
|