Gene
| Gene Model ID | habu1_s3443_g11729 |
|---|---|
| Locus | habu1_scaffold3443 : 799434 ... 840189 : - |
| To GenomeBrowser | habu1_scaffold3443:799434..840189 |
| Genes list of scaffold | habu1_scaffold3443 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3443_g11729.t1 | 1 | 1 | Sec7 | 62 | 244 | 0.0 | 236.6 | 0.0 | 0.0 | 236.0 |
| habu1_s3443_g11729.t1 | 1 | 1 | PH | 263 | 376 | 5.2e-25 | 87.6 | 8.9e-28 | 9.4e-25 | 86.8 |
| habu1_s3443_g11729.t1 | 1 | 1 | PH_11 | 264 | 373 | 2.2e-07 | 31.1 | 1.3e-09 | 1.4e-06 | 28.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3443_g11729.t1 | gi|602649244|ref|XP_007431031.1| | PREDICTED: cytohesin-1 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s3443_g11729.t1 | gi|694856874|ref|XP_009470048.1| | PREDICTED: cytohesin-1 isoform X3 [Nipponia nippon] | 0.0 |
| habu1_s3443_g11729.t1 | gi|557328083|ref|XP_006036979.1| | PREDICTED: cytohesin-1 [Alligator sinensis] | 0.0 |
| habu1_s3443_g11729.t1 | gi|602649242|ref|XP_007431030.1| | PREDICTED: cytohesin-1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s3443_g11729.t1 | gi|696975584|ref|XP_009557297.1| | PREDICTED: cytohesin-1 isoform X2 [Cuculus canorus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.4 |
| Venom grand-1 | 6.7 |
| Pit, infrared sensing | 11.4 |
| Nose | 12.7 |
| Brain-1 | 4.6 |
| Eye | 10.9 |
| fetal fibroblast | 8.7 |
| venom gland-2 | 14.5 |
| Brain-2 | 9.6 |
| Spleen | 25.4 |
| Lung | 10.8 |
| Liver | 3.8 |
| Kidney | 7.8 |
| Pancreas | 7.5 |
| Small intestine | 7.2 |
| Large intestine | 9.3 |
| Stomach | 7.0 |
| heart | 5.1 |
| ovary | 60.1 |
| cheek muscle | 7.1 |
Transcript
| Transcript ID | habu1_s3443_g11729.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11729.t1 gttcgatagactgtctctgctgctggcagtatggttctcaggatggagagtgtaccaaccgacctgacccctgaagagtg tcaagaattggagaacatccgtcggcggaaacaggagctgctggcagacatacagcgtctgaaagatgagatagcagaag tcactaatgaaattgagaacctgggctccacagaagagaggaaaaacatgcagagaaacaagcaagtggcaatgggcagg aagaaattcaacatggatcctaagaagggaattcagttcctcatagagaatgaccttttgaagaatacctgtgaagacat tgcccagttcctctacaagggggaaggactcaacaagactgccattggtgactacctgggggaaagagatgagtttaata tccaagtattacattcttttgtggagctgcacgagtttacagatctcaaccttgtacaggcactgcggcaattcctttgg agctttcggttgccaggtgaagcgcagaaaattgaccggatgatggaagcatttgcacaacggtactgtcaatgcaaccc tggtgtgtttcaatcaacagatacctgttatgtactttcctttgccattatcatgctgaataccagtttgcataatccca acgtgaaggacaagcccaccgtggagcgcttcatcgctatgaaccgtggcatcaatgatggcggagacctgcctgaggaa ttactcaggaatctctatgagagcataaaaaatgagcccttcaaaatacccgaggatgatggcaatgacttgacgcatac cttctttaatccggaccgtgaaggctggcttctgaagcttggtggccgagtgaagacgtggaagcgacgctggttcatct tgacagacaactgcctttactactttgagtacaccacggacaaggaaccgagaggcattattccactggagaatctaagc atccgtgaggtggaagattctaagaagccgaactgctttgaactgtatatccctgacaacaaggaccaggtcatcaaagc atgtaagacggaggcagacggacgtgtggtagaaggaaaccacactgtgtatcgcatctcggcacccactacagaagaga aggaagagtggatcaaatgcatcaaagctgcaatcagccgggaccctttctacgagatgcttgctgcacgcaagaagaag gtttcctccaccaagcgacattagtcaccttgtctaactctgtggtggtgaacttttgcagggaatacctctccatctcc tgagggtgggggacgagaggctgcactagatcgtctgctctctattgctaccctcaggagaccagcttcagcttttgcta ttcttttcctgtttgggagcaggaagaagggaagggggcgctaagctgatggcagccaccaattcactaacttctttcct aggaagaatgccagcttcttatcttggcaacctgaaccccactgcatcttctgcagggcatgtgaccagaagagaaagtg gcgagagtcttttgggctatcatagttgatttgttcattgtgtgagctaatggagagggctggtttggaacttttaattt cccacaactttgtgatttagcacagagcacctgcagcaaataaacattgaactcacatctggctta |
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Protein
| Protein ID | habu1_s3443_g11729.t1 |
|---|---|
| Definition | - |
>habu1_s3443_g11729.t1 MVLRMESVPTDLTPEECQELENIRRRKQELLADIQRLKDEIAEVTNEIENLGSTEERKNMQRNKQVAMGRKKFNMDPKKG IQFLIENDLLKNTCEDIAQFLYKGEGLNKTAIGDYLGERDEFNIQVLHSFVELHEFTDLNLVQALRQFLWSFRLPGEAQK IDRMMEAFAQRYCQCNPGVFQSTDTCYVLSFAIIMLNTSLHNPNVKDKPTVERFIAMNRGINDGGDLPEELLRNLYESIK NEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKP NCFELYIPDNKDQVIKACKTEADGRVVEGNHTVYRISAPTTEEKEEWIKCIKAAISRDPFYEMLAARKKKVSSTKRH |
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