Gene
| Gene Model ID | habu1_s346_g01634 |
|---|---|
| Locus | habu1_scaffold346 : 1 ... 26337 : + |
| To GenomeBrowser | habu1_scaffold346:1..26337 |
| Genes list of scaffold | habu1_scaffold346 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s346_g01634.t2 | 1 | 1 | Caldesmon | 3 | 57 | 3.6e-07 | 28.9 | 3.2e-10 | 3.6e-07 | 28.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.7 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 2.6 |
| Nose | 1.3 |
| Brain-1 | 1.0 |
| Eye | 2.7 |
| fetal fibroblast | 2.1 |
| venom gland-2 | 0.8 |
| Brain-2 | 2.2 |
| Spleen | 1.1 |
| Lung | 8.4 |
| Liver | 0.1 |
| Kidney | 1.5 |
| Pancreas | 0.3 |
| Small intestine | 1.2 |
| Large intestine | 2.4 |
| Stomach | 2.3 |
| heart | 8.4 |
| ovary | 1.6 |
| cheek muscle | 0.6 |
Transcript
| Transcript ID | habu1_s346_g01634.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01634.t1 gaggaggaggaggaggaggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaatgtctatgg attttgagtgaaagaactagatggatgtggaccactctaagaatcttgtgtcatcttaaggaaggggattcattgggggc tatggagaagctctgcaggcagctgacataccatctgagcccccactctcagtggcgacgccagggcatggtgaagagga agccacaggcttgtttgaaaacaatcttggtggggaatcctctggacaacacagtggacttgtctggcatccctttgact atgaaggaattagatcggcttatctcgtacctccagcacagctctgagtatgttgaaaatgtggagctttgcttcacgga gctgacagatgagatattcctccagcttttgccagttctcagtgccctacctcgtctcacaactctttcccttaatggca acaggcttacaaaggccgtcctccgggacctgactgaagctttgaaggacaccagaaacttccccagcatgacttggatt gatctgggcaataatgtggacatattctctctgccacagccctttctggttagccttaagaaacgaagccctacccaaag caatctcccaactattcttgaatttggtgaaggtcaggtaagtgaccttgagagccaagaaggtctttcgtcacaggatg aagaccaaagtgatggtggcttggaagacactaaaaccaggcaggtatggacaggtgaagctattgaggttaagctgctg ccaaatcaacctacaaatcaagaacagatttctactggtttgtgtcagacatgaaacagtggcctctcatttgcctagga tgtgccaaatggatcctttataaccaaaagatcttggccagtttatgctaatgaagctctcttctgataaaaacttttaa ttccttaacttgc |
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| Transcript ID | habu1_s346_g01634.t2 |
| Definition | - |
>habu1_s346_g01634.t2 gaggaggaggaggaggaggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaatgtctatgg atttagaggaagcattatttccaggcattatttggacatgggacaataagcagaaatggatgcagcgagaagatgatggt cactctgtgtggtggagagatttggcaagaataatggaaggggattcattgggggctatggagaagctctgcaggcagct gacataccatctgagcccccactctcagtggcgacgccagggcatggtgaagaggaagccacaggcttgtttgaaaacaa tcttggtggggaatcctctggacaacacagtggacttgtctggcatccctttgactatgaaggaattagatcggcttatc tcgtacctccagcacagctctgagtatgttgaaaatgtggagctttgcttcacggagctgacagatgagatattcctcca gcttttgccagttctcagtgccctacctcgtctcacaactctttcccttaatggcaacaggcttacaaaggccgtcctcc gggacctgactgaagctttgaaggacaccagaaacttccccagcatgacttggattgatctgggcaataatgtggacata ttctctctgccacagccctttctggttagccttaagaaacgaagccctacccaaagcaatctcccaactattcttgaatt tggtgaaggtcaggtaagtgaccttgagagccaagaaggtctttcgtcacaggatgaagaccaaagtgatggtggcttgg aagacactaaaaccaggcaggtatggacaggtgaagctattgaggttaagctgctgccaaatcaacctacaaatcaagaa cagatttctactggtttgtgtcagacatgaaacagtggcctctcatttgcctaggatgtgccaaatggatcctttataac caaaagatcttggccagtttatgctaatgaagctctcttctgataaaaacttttaattccttaacttgc |
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Protein
| Protein ID | habu1_s346_g01634.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01634.t1 RRRRRRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKCLWILSERTRWMWTTLRILCHLKEGDSLGA MEKLCRQLTYHLSPHSQWRRQGMVKRKPQACLKTILVGNPLDNTVDLSGIPLTMKELDRLISYLQHSSEYVENVELCFTE LTDEIFLQLLPVLSALPRLTTLSLNGNRLTKAVLRDLTEALKDTRNFPSMTWIDLGNNVDIFSLPQPFLVSLKKRSPTQS NLPTILEFGEGQVSDLESQEGLSSQDEDQSDGGLEDTKTRQVWTGEAIEVKLLPNQPTNQEQISTGLCQT |
|
| Protein ID | habu1_s346_g01634.t2 |
| Definition | - |
>habu1_s346_g01634.t2 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEMSMDLEEALFPGIIWTWDNKQKWMQREDDG HSVWWRDLARIMEGDSLGAMEKLCRQLTYHLSPHSQWRRQGMVKRKPQACLKTILVGNPLDNTVDLSGIPLTMKELDRLI SYLQHSSEYVENVELCFTELTDEIFLQLLPVLSALPRLTTLSLNGNRLTKAVLRDLTEALKDTRNFPSMTWIDLGNNVDI FSLPQPFLVSLKKRSPTQSNLPTILEFGEGQVSDLESQEGLSSQDEDQSDGGLEDTKTRQVWTGEAIEVKLLPNQPTNQE QISTGLCQT |
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