Gene
| Gene Model ID | habu1_s346_g01640 |
|---|---|
| Locus | habu1_scaffold346 : 124166 ... 139484 : + |
| To GenomeBrowser | habu1_scaffold346:124166..139484 |
| Genes list of scaffold | habu1_scaffold346 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fibronectin type iii domain-containing protein 4 | GO:0005783 GO:0005886 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s346_g01640.t1 | 1 | 1 | fn3 | 30 | 112 | 1.4e-11 | 44.3 | 5.8e-15 | 2.9e-11 | 43.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s346_g01640.t1 | gi|363732405|ref|XP_419991.3| | PREDICTED: fibronectin type III domain-containing protein 5 isoform X5 [Gallus gallus] | 0.0 |
| habu1_s346_g01640.t1 | gi|729736291|ref|XP_010564208.1| | PREDICTED: fibronectin type III domain-containing protein 4 isoform X1 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s346_g01640.t1 | gi|729736293|ref|XP_010564209.1| | PREDICTED: fibronectin type III domain-containing protein 4 isoform X2 [Haliaeetus leucocephalus] | 0.0 |
| habu1_s346_g01640.t1 | gi|525029382|ref|XP_005062095.1| | PREDICTED: fibronectin type III domain-containing protein 4 isoform X3 [Ficedula albicollis] | 0.0 |
| habu1_s346_g01640.t1 | gi|224049005|ref|XP_002191410.1| | PREDICTED: fibronectin type III domain-containing protein 4 [Taeniopygia guttata] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.8 |
| Brain-1 | 3.9 |
| Eye | 0.5 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 5.6 |
| Spleen | 0.2 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s346_g01640.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01640.t1 ccgactcgatgagcagctgctgcatctggccgcgatcatggctccaattcccacgtacctcaacccggccgccgtcctgg tcctggtcagctgcgacctgtgccttgtgcgcgcaaatcggcccccatcgcctgtcaacgtgactgtcacacagttgaag gcaaactcagccaccgtctcctgggatgtgccagaaggagacgtcataattggctatgccatttcacagcagcgacaaga tgggcaaatgcaacgattcatccgggaggtgaacaccacaaacagggcctgtgtactctgggatctggcagaggatgcag actacatcattcaggtccagagcattggcctccacggagagagtcaggctagcaagagagtccattttcgcacgttaaag caaagtgaccgacttccgtccaacagctcaaaccaaggagacatcacaatggagggcctggacaaagagcggcagctaca gactggggagattattatcattgtggttgtgctgcttatgtgggcagctgtgatcgcactcttctgcaagcaatatgaca tcattaaggacaatgattccaacaataataaagagaagaccaagccttcctcagaacatagcactccagagcggcccacg ggggggctactacgtagcaagaagaaatcaccatctatcaatatcattgaagtatagctgttggcacacaggctcgaagc actccagaaggctgctggaacattgctgggccctgggtctggctcttcacctgcatgcaaagaattaaagcttcttgccc tgaaggaggga |
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Protein
| Protein ID | habu1_s346_g01640.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01640.t1 MAPIPTYLNPAAVLVLVSCDLCLVRANRPPSPVNVTVTQLKANSATVSWDVPEGDVIIGYAISQQRQDGQMQRFIREVNT TNRACVLWDLAEDADYIIQVQSIGLHGESQASKRVHFRTLKQSDRLPSNSSNQGDITMEGLDKERQLQTGEIIIIVVVLL MWAAVIALFCKQYDIIKDNDSNNNKEKTKPSSEHSTPERPTGGLLRSKKKSPSINIIEV |
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