Gene
| Gene Model ID | habu1_s346_g01646 |
|---|---|
| Locus | habu1_scaffold346 : 226326 ... 241798 : + |
| To GenomeBrowser | habu1_scaffold346:226326..241798 |
| Genes list of scaffold | habu1_scaffold346 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s346_g01646.t3 | 3 | 1 | zf-H2C2_5 | 298 | 320 | 1.7e-06 | 27.8 | 1.3e-06 | 0.0037 | 17.4 |
| habu1_s346_g01646.t3 | 3 | 1 | zf-H2C2_2 | 312 | 335 | 6.5e-22 | 76.6 | 3.6e-12 | 1.1e-08 | 34.9 |
| habu1_s346_g01646.t3 | 3 | 2 | zf-H2C2_5 | 326 | 348 | 1.7e-06 | 27.8 | 2.5e-07 | 0.00073 | 19.6 |
| habu1_s346_g01646.t3 | 3 | 2 | zf-H2C2_2 | 340 | 364 | 6.5e-22 | 76.6 | 4.7e-12 | 1.4e-08 | 34.6 |
| habu1_s346_g01646.t3 | 3 | 3 | zf-H2C2_5 | 354 | 376 | 1.7e-06 | 27.8 | 3.1e-06 | 0.0092 | 16.1 |
| habu1_s346_g01646.t3 | 3 | 3 | zf-H2C2_2 | 368 | 388 | 6.5e-22 | 76.6 | 1.2e-07 | 0.00034 | 20.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s346_g01646.t3 | gi|558113814|ref|XP_006112585.1| | PREDICTED: zinc finger protein 513 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.1 |
| Venom grand-1 | 0.8 |
| Pit, infrared sensing | 1.4 |
| Nose | 1.2 |
| Brain-1 | 1.1 |
| Eye | 1.0 |
| fetal fibroblast | 2.1 |
| venom gland-2 | 1.2 |
| Brain-2 | 1.0 |
| Spleen | 1.1 |
| Lung | 1.4 |
| Liver | 1.3 |
| Kidney | 0.9 |
| Pancreas | 1.0 |
| Small intestine | 1.3 |
| Large intestine | 0.7 |
| Stomach | 1.0 |
| heart | 0.8 |
| ovary | 4.7 |
| cheek muscle | 1.7 |
Transcript
| Transcript ID | habu1_s346_g01646.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01646.t1 cagcctgggaaatgtagtcccccaggaagacggagcgaaacaaagaggaagtctcacgattcttgctcgttcttgaaact ttttgtcttcggcccctttgtgcggaaaatgaatcgtcacccggagaagaaagcagaagcagcacatcaacgttgcacag agactgaagattcagaaggaccttgacagattggaacactgggctctatccaattaaggtcctacacatacacaagaaaa cccaaacgcacaggcaagaaatactactttggagggtacagagcaggcaacttatgtccttcagaagttttgatcttcaa gagctttttaactgtagacaaacagaaaacaatttaagaaggaataaatccaacaggaatgtgaagactcttcctgtatc atgcatgcaactatgtgctcactggacaaagattataagtgctgatggcattgagatctgtattctcagagaagtcaagg gagctgaacttgaaacactgaaaaatcaaaaacccaggaggagaattccatcatggcagcatcccttcctgggttcagag gaaaagactccacttcccgtcatgcagcacgggagggaccggagccggaagcgttggctattctgccgtccgccccgcgg atgggcgggagcgccggaggagcggcggctgtcggggcgtcgcgaaggaagaagcggcttcaccggtggcaatccaggcc gagcggcccggaggggggaaggtatccagggctggagccgctcccaaccccccgtgctgcggggcaagatgccccgccgg aagcagcgccacccgcagcccgtcaaagtggaggttcctggtgctccggccgagccgtcaagagaggagagcccggcgcc gcaagccagcttcctcttaaagcaggagctgtccctgtccctggaggacgaagaggacagcagtgctccgattctggcct tcgaaaaggactccgaagactccctcggggggacacctggactgccagcttacacactgagtgacgaggatctcccgtct ctgtgccaggcccaggacgaagatggagagaatgaagggccgggccgggcttgccagcattgtggcctgcctagtcctgg ttctactccctgctgcccctctgaggtaggggatgaggaaggctcccctaaggggcgtatagtcttttcctgccaactct gcccctttgcctcacactactccagccacctcaagcggcacatgaagactcacaatggcgagaaaccttaccgctgtccg cattgcccgtatgcctcagctcagctggttaacctgacacgccatttgcgaacccacactggtgagaagccctaccactg ccccacctgccccttcgcttgcagcagccttggcaacctcaagagacaccagcgggtccatggccaggaacgtccagtgc gctgtagctcctgcagctgccactgtgtccaggggaattccctccagcaccacagcgcggggatccagggggaatcggag gcagaaatggagggaccacccattgcagatcaggagacagagccaccaccattgctgcctagctccccatttctgcaggc ggaagactctaatacggttcttcctgagctgctcttcccgttcacgtgcagggcatgtggattggtgctacaagctgacg aaggtttgggtgagccagtatgtgggcgttgcagcctggcagtgctgggggctgaaccagcctcaccaaaaggcttctcc tgccagctatgcccttttattaccacctatcctaaccacctggcccgccatatgaagacacacagcggagaaaagccctt tgcctgtgctctctgtccatatgcctcagcccatctggacaacctcaagcggcaccagcgggtgcacactggtgagaagc cctacaagtgccccctatgcccatatgcctgtggcaatcttgccaacctcaagcgccatggacgcatccattcgggggac aagcctttccgctgccgtctctgcccatattcatgcaaccagagcatgaacctcaagcgccacatgctgcggcatacagg tgaaaagccctttcagtgccgcatctgcccctacactactggccactgggacaattataagcgtcaccagaaggtgcatg ggcagggcctgggagaggaaggagggcctggtccggacagtagcctgacctaatgatgctgaaagactccttgggcttcc aactctcattatagttgcctgctgtcaagcctatgtaaaagattgactgggatgtgcaggagaaggagctgtatgtactt gcaggagcagcagtaccacctttttaagaaagcattattttctttgctgaaaagcaccttagggccttgccctatccagt gcttctgtccataggaagaaaaaggcatctgctctgcagaccactctctgaaactgttactctgtgggacagctgaaacc tgcggagaggagctcctttgtcctcttttgtcttttttgtgcctcccctctctagtcctttaattgtggttgctgcttga atctgtgtaatttatatggtgtatt |
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| Transcript ID | habu1_s346_g01646.t2 |
| Definition | - |
>habu1_s346_g01646.t2 cagcctgggaaatgtagtcccccaggaagacggagcgaaacaaagaggaagtctcacgattcttgctcgttcttgaaact ttttgtcttcggcccctttgtgcggaaaatgaatcgtcacccggagaagaaagcagaagcagcacatcaacgttgcacag agactgaagattcagaaggaccttgacagattggaacactgggctctatccaattaaggtcctacacatacacaagaaaa cccaaacgcacaggcaagaaatactactttggagggtacagagcaggcaacttatgtccttcagaagttttgatcttcaa gagctttttaactgtagacaaacagaaaacaatttaagaaggaataaatccaacaggaatgtgaagactcttcctgtatc atgcatgcaactatgtgctcactggacaaagattataagtgctgatggcattgagatctgtattctcagagaagtcaagg gagctgaacttgaaacactgaaaaatcaaaaacccaggaggagaattccatcatggcagcatcccttcctgggttcagag gaaaagactccacttcccgtcatgcagcacgggagggaccggagccggaagcgttggctattctgccgtccgccccgcgg atgggcgggagcgccggaggagcggcggctgtcggggcgtcgcgaaggaagaagcggcttcaccggtggcaatccaggcc gagcggcccggaggggggaaggtatccagggctggagccgctcccaaccccccgtgctgcggggcaagatgccccgccgg aagcagcgccacccgcagcccgtcaaagtggaggttcctggtgctccggccgagccgtcaagagaggagagcccggcgcc gcaagccagcttcctcttaaagcaggagctgtccctgtccctggaggacgaagaggacagcagtgctccgattctggcct tcgaaaaggactccgaaggcgagggagaggacaaagtgaggattcccacagctgcccacctgatgtcccctccttgtgtg ctgcagactccctcggggggacacctggactgccagcttacacactgagtgacgaggatctcccgtctctgtgccaggcc caggacgaagatggagagaatgaagggccgggccgggcttgccagcattgtggcctgcctagtcctggttctactccctg ctgcccctctgaggtaggggatgaggaaggctcccctaaggggcgtatagtcttttcctgccaactctgcccctttgcct cacactactccagccacctcaagcggcacatgaagactcacaatggcgagaaaccttaccgctgtccgcattgcccgtat gcctcagctcagctggttaacctgacacgccatttgcgaacccacactggtgagaagccctaccactgccccacctgccc cttcgcttgcagcagccttggcaacctcaagagacaccagcgggtccatggccaggaacgtccagtgcgctgtagctcct gcagctgccactgtgtccaggggaattccctccagcaccacagcgcggggatccagggggaatcggaggcagaaatggag ggaccacccattgcagatcaggagacaggtacatgatggaaatggcaaggtagaattcatagccttgcaaagggagggaa tatacataaactttcagtgggaggaagagggagaaactttacaaatcttgatataccaatagttctcagcaacttttgga gttaaggatctgaagcctgatagaaagactctt |
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| Transcript ID | habu1_s346_g01646.t3 |
| Definition | - |
>habu1_s346_g01646.t3 cagcctgggaaatgtagtcccccaggaagacggagcgaaacaaagaggaagtctcacgattcttgctcgttcttgaaact ttttgtcttcggcccctttgtgcggaaaatgaatcgtcacccggagaagaaagcagaagcagcacatcaacgttgcacag agactgaagattcagaaggaccttgacagattggaacactgggctctatccaattaaggtcctacacatacacaagaaaa cccaaacgcacaggcaagaaatactactttggagggtacagagcaggcaacttatgtccttcagaagttttgatcttcaa gagctttttaactgtagacaaacagaaaacaatttaagaaggaataaatccaacaggaatgtgaagactcttcctgtatc atgcatgcaactatgtgctcactggacaaagattataagtgctgatggcattgagatctgtattctcagagaagtcaagg gagctgaacttgaaacactgaaaaatcaaaaacccaggaggagaattccatcatggcagcatcccttcctgggttcagag gaaaagactccacttcccgtcatgcagcacgggagggaccggagccggaagcgttggctattctgccgtccgccccgcgg atgggcgggagcgccggaggagcggcggctgtcggggcgtcgcgaaggaagaagcggcttcaccggtggcaatccaggcc gagcggcccggaggggggaaggtatccagggctggagccgctcccaaccccccgtgctgcggggcaagatgccccgccgg aagcagcgccacccgcagcccgtcaaagtggaggttcctggtgctccggccgagccgtcaagagaggagagcccggcgcc gcaagccagcttcctcttaaagcaggagctgtccctgtccctggaggacgaagaggacagcagtgctccgattctggcct tcgaaaaggactccgaagactccctcggggggacacctggactgccagcttacacactgagtgacgaggatctcccgtct ctgtgccaggcccaggacgaagatggagagaatgaagggccgggccgggcttgccagcattgtggcctgcctagtcctgg ttctactccctgctgcccctctgaggtaggggatgaggaaggctcccctaaggggcgtatagtcttttcctgccaactct gcccctttgcctcacactactccagccacctcaagcggcacatgaagactcacaatggcgagaaaccttaccgctgtccg cattgcccgtatgcctcagctcagctggttaacctgacacgccatttgcgaacccacactggtgagaagccctaccactg ccccacctgccccttcgcttgcagcagccttggcaacctcaagagacaccagcgggtccatggccaggaacgtccagtgc gctgtagctcctgcagctgccactgtgtccaggggaattccctccagcaccacagcgcggggatccagggggaatcggag gcagaaatggagggaccacccattgcagatcaggagacaggtacatgatggaaatggcaaggtagaattcatagccttgc aaagggagggaatatacataaactttcagtgggaggaagagggagaaactttacaaatcttgatataccaatagttctca gcaacttttggagttaaggatctgaagcctgatagaaagactctt |
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Protein
| Protein ID | habu1_s346_g01646.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01646.t1 MSFRSFDLQELFNCRQTENNLRRNKSNRNVKTLPVSCMQLCAHWTKIISADGIEICILREVKGAELETLKNQKPRRRIPS WQHPFLGSEEKTPLPVMQHGRDRSRKRWLFCRPPRGWAGAPEERRLSGRREGRSGFTGGNPGRAARRGEGIQGWSRSQPP VLRGKMPRRKQRHPQPVKVEVPGAPAEPSREESPAPQASFLLKQELSLSLEDEEDSSAPILAFEKDSEDSLGGTPGLPAY TLSDEDLPSLCQAQDEDGENEGPGRACQHCGLPSPGSTPCCPSEVGDEEGSPKGRIVFSCQLCPFASHYSSHLKRHMKTH NGEKPYRCPHCPYASAQLVNLTRHLRTHTGEKPYHCPTCPFACSSLGNLKRHQRVHGQERPVRCSSCSCHCVQGNSLQHH SAGIQGESEAEMEGPPIADQETEPPPLLPSSPFLQAEDSNTVLPELLFPFTCRACGLVLQADEGLGEPVCGRCSLAVLGA EPASPKGFSCQLCPFITTYPNHLARHMKTHSGEKPFACALCPYASAHLDNLKRHQRVHTGEKPYKCPLCPYACGNLANLK RHGRIHSGDKPFRCRLCPYSCNQSMNLKRHMLRHTGEKPFQCRICPYTTGHWDNYKRHQKVHGQGLGEEGGPGPDSSLT |
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| Protein ID | habu1_s346_g01646.t2 |
| Definition | - |
>habu1_s346_g01646.t2 MSFRSFDLQELFNCRQTENNLRRNKSNRNVKTLPVSCMQLCAHWTKIISADGIEICILREVKGAELETLKNQKPRRRIPS WQHPFLGSEEKTPLPVMQHGRDRSRKRWLFCRPPRGWAGAPEERRLSGRREGRSGFTGGNPGRAARRGEGIQGWSRSQPP VLRGKMPRRKQRHPQPVKVEVPGAPAEPSREESPAPQASFLLKQELSLSLEDEEDSSAPILAFEKDSEGEGEDKVRIPTA AHLMSPPCVLQTPSGGHLDCQLTH |
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| Protein ID | habu1_s346_g01646.t3 |
| Definition | - |
>habu1_s346_g01646.t3 MSFRSFDLQELFNCRQTENNLRRNKSNRNVKTLPVSCMQLCAHWTKIISADGIEICILREVKGAELETLKNQKPRRRIPS WQHPFLGSEEKTPLPVMQHGRDRSRKRWLFCRPPRGWAGAPEERRLSGRREGRSGFTGGNPGRAARRGEGIQGWSRSQPP VLRGKMPRRKQRHPQPVKVEVPGAPAEPSREESPAPQASFLLKQELSLSLEDEEDSSAPILAFEKDSEDSLGGTPGLPAY TLSDEDLPSLCQAQDEDGENEGPGRACQHCGLPSPGSTPCCPSEVGDEEGSPKGRIVFSCQLCPFASHYSSHLKRHMKTH NGEKPYRCPHCPYASAQLVNLTRHLRTHTGEKPYHCPTCPFACSSLGNLKRHQRVHGQERPVRCSSCSCHCVQGNSLQHH SAGIQGESEAEMEGPPIADQETGT |
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