Gene
| Gene Model ID | habu1_s346_g01647 |
|---|---|
| Locus | habu1_scaffold346 : 240500 ... 247605 : - |
| To GenomeBrowser | habu1_scaffold346:240500..247605 |
| Genes list of scaffold | habu1_scaffold346 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sorting nexin- partial | GO:0007165 GO:0035091 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s346_g01647.t1 | 1 | 1 | PX | 9 | 104 | 5.3e-16 | 58.4 | 1.9e-19 | 1.4e-15 | 57.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s346_g01647.t1 | gi|602627961|ref|XP_007420922.1| | PREDICTED: sorting nexin-17 [Python bivittatus] | 0.0 |
| habu1_s346_g01647.t1 | gi|543379152|ref|XP_005532774.1| | PREDICTED: sorting nexin-17 isoform X1 [Pseudopodoces humilis] | 0.0 |
| habu1_s346_g01647.t1 | gi|543379154|ref|XP_005532775.1| | PREDICTED: sorting nexin-17 isoform X2 [Pseudopodoces humilis] | 0.0 |
| habu1_s346_g01647.t1 | gi|726999978|ref|XP_010390202.1| | PREDICTED: sorting nexin-17, partial [Corvus cornix cornix] | 0.0 |
| habu1_s346_g01647.t1 | gi|527258545|ref|XP_005147531.1| | PREDICTED: sorting nexin-17 [Melopsittacus undulatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 16.5 |
| Venom grand-1 | 44.3 |
| Pit, infrared sensing | 27.5 |
| Nose | 15.7 |
| Brain-1 | 11.1 |
| Eye | 18.1 |
| fetal fibroblast | 18.5 |
| venom gland-2 | 42.1 |
| Brain-2 | 12.3 |
| Spleen | 39.4 |
| Lung | 50.5 |
| Liver | 130.1 |
| Kidney | 70.1 |
| Pancreas | 98.1 |
| Small intestine | 63.6 |
| Large intestine | 36.3 |
| Stomach | 46.1 |
| heart | 23.6 |
| ovary | 34.4 |
| cheek muscle | 32.6 |
Transcript
| Transcript ID | habu1_s346_g01647.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01647.t1 gcagcagctgcagacggaggtggaagcggccatgcacttctccatccccgagaccgagacccgcgccggggatggcggca acgctgcggcctacgtggcctacagcattcatgtgaatggtgttctgcactgccaggtgcgatacagccagctgcttagt ttgcatgaacagctaaggaaggaatatggagctaatgtggtaccagcttttcctccaaaaaagatcttcaccctcacccc agtggaagtggagcagcggcgggaacaactagaaaaatatatgcaagcagtacggcaggaccccttgctgggaggtagtg agatcttcaatagcttcctgcgcaaagcccagcaggaaacccagcagatcccaactgaggaggtacagctagatgtgctg ttatccaatgggcagaaggtgaaagtcacaattctcacctcagaccaaacagaggatgttctggaggctgtggccttgaa gttggacttgccggaggatttgattggctacttccatctcttccttgtgcgggaagccaaggatggagcattttccttca tccggaaattgcaggaatttgagcttccttatgtatcagtcaccagcctccgcaaccctgaatacaagatcctgctgcgc aagagctactgggactctgcctttgatgatgatgtcatggagcagcgggtaggactgaacctgctatatgcccagacagt tgcagatattgaacggggctggatccttgccaataaggaacagcaccgtcagcttaaatctttacaggaaaaggtctcta aaaaagagttcatccgcttggcacaaaccctcaagtattatggctatctcaaatttgacccctgtattacggatttccct gagaaaggctgtcatgttattgttggagcaggcaacagtgaactgaatttccaggtcaagctgcccaatgaccagatcaa ggaagggagtttcaaagtgacacgaatgcgttgttggcgagttacttcctcggtccctgtgcacaacggaacatcaggca caaattctggcaagtcagaggtgaaattggaactagcttttgagtacctgatgagcaaggaccgattgcagtgggtcacc atcaccagtccacaggctataatgttgagcatctgtttgcagtccatggtggatgagctgatggtgaagaaatctggagg aagcatacgtaagatgttccgtagacgaaccattggagccttacagcgttcagacagccagcaagcagtgaaatcacctc ctcttttggattcccctgatggtagtagggaccctattacaaaagtctcgagcaaattgggctctgtcagcttacgggcc atcagccattccagctcttcaaatgacattggggcaaatgatttccatggcaactatgcctttgagggcattggcgatga ggacctttaaaagccctgctttgccccaaatatctttgtggaatgtatgacctgcttgcgggttagtcttgatgtgcctc agcccccagttggctgtatgtcctttaccagaatctctgtctgcagaggcaatttgcagggctgactagtagcttcagct tcatacatgccaaactagggtagagtggacatttgcacaaacagcaaacacaactctgattgctcacagtagacttttaa ctataaccgctagacttgtaatcttgtttatctacctgctgtttacatttgaacattaacaaatctttgtgacagtgatt aaataaatcatgattggaaataaatcctgtgagcccttctctctactacatccaatttcccaatttcttgctccaacatc ttggcactagagctgcctactcaagcaaaaatgataaggaaactgttatggacacagtagaggccacattactgaaacca tattatctgttttcctctcctgctggaaataagatggtgaaaagacagcatatgcctgccataaatacgctcacataggc cacttcagcagcagcacatctgcactgtgatcaggtttgccagtctccagctgctcttgccagccaaaataaagccagat aagaaaacagtttaatgcattaatacaccatataaattacacagattcaagcagcaaccacaattaaaggactagagagg ggaggcacaaaaaagacaaaagaggacaaaggagctcctctccgcaggtttcagctgtcccacagagtaacagtttcaga gagtggtctgcagagcagatgcctttttcttcctatggacagaagcactggatagggcaaggccctaaggtgcttttcag caaagaaaataatgctttcttaaaaaggtggtactgctgctcctgcaagtacatacagctccttctcctgcacatcccag tcaatcttttacataggcttgacagcaggcaactataatgagagttggaagcccaaggagtctttcagcatcattaggtc aggctactgtccggaccaggccctccttcctctcccaggccctgcccatgcaccttctggtgacgcttataattgtccca gtggccagtagtgtaggggcagatgcggcactgaaagggcttttcacctgtatgccgcagcatgtggcgcttgaggttca tgctctggttgcatgaatatgggcagagacggcagcggaaaggcttgtcccccgaatggatgcgtccatggcgcttgagg ttggcaagattgccacaggcatatgggcatagggggcacttgtagggcttctcaccagtgtgcacccgctggtgccgctt gaggttgtccagatgggctgaggcatatggacagagagcacaggcaaagggcttttctccgctgtgtgtcttcatatggc gggccaggtggttaggataggtggtaataaaagggcatagctggcaggagaagccttttggtgaggctggttcagccccc agcactgccaggctgcaacgcccacatactggctcacccaaaccttcgtcagcttgtagcaccaatccacatgccctgca cgtgaacgggaagagcagctcaggaagaaccgtattagagtcttccgcctgcagaaatggggagctaggcagcaatggtg gtggctctgtggaagaaaaatagcaataaacagaaatgttctaaacagatattattggaaccatctgtaacttgcttcct tcactatcatacttagtgcagaccaatttgcataatcctctatccttaactcttgatgtactacaagcccactgtagaat actgctgttacaattgaaattagaggagaggcaaccaatcccctaaaaagtaagggtccttggcacataaattccatgct ctggttcaggctaataaatgcatatcaatgtggcagacac |
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Protein
| Protein ID | habu1_s346_g01647.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01647.t1 MHFSIPETETRAGDGGNAAAYVAYSIHVNGVLHCQVRYSQLLSLHEQLRKEYGANVVPAFPPKKIFTLTPVEVEQRREQL EKYMQAVRQDPLLGGSEIFNSFLRKAQQETQQIPTEEVQLDVLLSNGQKVKVTILTSDQTEDVLEAVALKLDLPEDLIGY FHLFLVREAKDGAFSFIRKLQEFELPYVSVTSLRNPEYKILLRKSYWDSAFDDDVMEQRVGLNLLYAQTVADIERGWILA NKEQHRQLKSLQEKVSKKEFIRLAQTLKYYGYLKFDPCITDFPEKGCHVIVGAGNSELNFQVKLPNDQIKEGSFKVTRMR CWRVTSSVPVHNGTSGTNSGKSEVKLELAFEYLMSKDRLQWVTITSPQAIMLSICLQSMVDELMVKKSGGSIRKMFRRRT IGALQRSDSQQAVKSPPLLDSPDGSRDPITKVSSKLGSVSLRAISHSSSSNDIGANDFHGNYAFEGIGDEDL |
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