Gene
| Gene Model ID | habu1_s346_g01648 |
|---|---|
| Locus | habu1_scaffold346 : 249036 ... 257942 : + |
| To GenomeBrowser | habu1_scaffold346:249036..257942 |
| Genes list of scaffold | habu1_scaffold346 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| translation initiation factor eif-2b subunit delta | GO:0003743 GO:0005840 GO:0006446 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s346_g01648.t1 | 1 | 1 | IF-2B | 212 | 409 | 0.0 | 182.0 | 0.0 | 0.0 | 181.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s346_g01648.t1 | gi|602627957|ref|XP_007420920.1| | PREDICTED: translation initiation factor eIF-2B subunit delta isoform X1 [Python bivittatus] | 0.0 |
| habu1_s346_g01648.t1 | gi|602627959|ref|XP_007420921.1| | PREDICTED: translation initiation factor eIF-2B subunit delta isoform X2 [Python bivittatus] | 0.0 |
| habu1_s346_g01648.t1 | gi|697002507|ref|XP_009567375.1| | PREDICTED: translation initiation factor eIF-2B subunit delta [Cuculus canorus] | 0.0 |
| habu1_s346_g01648.t1 | gi|701418594|ref|XP_010000070.1| | PREDICTED: translation initiation factor eIF-2B subunit delta [Chaetura pelagica] | 0.0 |
| habu1_s346_g01648.t1 | gi|683939181|ref|XP_009098143.1| | PREDICTED: translation initiation factor eIF-2B subunit delta [Serinus canaria] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.9 |
| Venom grand-1 | 24.6 |
| Pit, infrared sensing | 14.4 |
| Nose | 13.9 |
| Brain-1 | 10.0 |
| Eye | 13.6 |
| fetal fibroblast | 28.0 |
| venom gland-2 | 48.8 |
| Brain-2 | 11.2 |
| Spleen | 18.4 |
| Lung | 18.1 |
| Liver | 18.0 |
| Kidney | 14.2 |
| Pancreas | 22.1 |
| Small intestine | 18.8 |
| Large intestine | 13.6 |
| Stomach | 15.2 |
| heart | 18.5 |
| ovary | 12.3 |
| cheek muscle | 26.7 |
Transcript
| Transcript ID | habu1_s346_g01648.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01648.t1 gctctgagcagcagggggcgctgtggctgacattgccgggtgaggtcagggcggagccagcggagtggctatggcggagc ccgggagctgcgaggccccggagcgcagccaggcgcccagcgcggagggcaagttgcagctccggaaagagaagaagcag cagaagaaaaagcgccgcgatgcggagaaggagcccaagctgccccccgatgggctcgcccaccccggtcccacgcctgc tgggcagttgcctccgccagggccagaacctaccacgccgggtcctcctgacaaagcctgtggtggcgagcgggcgggcc tgggcaaaagtaagtctgagttgcgagctgagcgccgggccaagcaggaggccgatcgggcggtgaagcaagctcggaag ggtgatccgagtcagacagccgtgcctaccaagcctcgggtaggacccaatgaaatccagccagcagtcaagaggctccc agaacatgtgcaggtggatgatccagctgcccaaaaaaagctagccaaaaagttggagcgtcagcaggtccctatgaggc cagattatggtgccaaagttagtctgttctcccacttgcatcagtatagtcgcaaagagttactcacacaacagatgagc atcccggtctccaccatccaccccgcagtggtgcgtcttggcctccagtactctcagggcatcattaatggctccaatgc tcggtgtattgcactcttaaaagttttcaaacaggtgattagagactataccactccggccaacgaggaactttcacggg atcttgtaaacaagctgaaaccttacatcagcttcctgactcagtgcaggcccctctctgctagcatgggcaatgccatc aaatttcttaagaaggagatctcttcactgccagggaccatacgagaagagaaggccaaggagcaacttcaggagacaat tgacaaatatgagcgggagaagatttttctggcagctgaagccatttccaaatttgcctttgagaagatcaacgatggtg acgtcatccttgtctatggatgctcgtccttggtgagccgcattctctgtgaggctcatgccaatcatcgtgccttccga gtggtggtagtggacagtcagccacggttagaaggccgggagacactatgccgcctggtgaaacagggagtccgctgcag ctacgtgctgatcaatgccatctcctacgtgttacctgaggtttccaaagtgctgttaggagctcatgcattattagcca atggatcagtgatgtcacaccgactcctttgtctccaatgaacttgacgatccagatgacctgattgggtcaaaaggaaa gaggagtccattatccaactggcaggaaagcaaatcgttgcgccttctcaatttagtctatgatgtgacccccctagagt tggtggatctggtcattacagagttggggatgatcccttgcacctctgttcctgttgttctgcgtgtcaagaatgtagag cagtaatgttgggagagtgaataaacctgcgtgtctctgctccatgc |
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Protein
| Protein ID | habu1_s346_g01648.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01648.t1 MAEPGSCEAPERSQAPSAEGKLQLRKEKKQQKKKRRDAEKEPKLPPDGLAHPGPTPAGQLPPPGPEPTTPGPPDKACGGE RAGLGKSKSELRAERRAKQEADRAVKQARKGDPSQTAVPTKPRVGPNEIQPAVKRLPEHVQVDDPAAQKKLAKKLERQQV PMRPDYGAKVSLFSHLHQYSRKELLTQQMSIPVSTIHPAVVRLGLQYSQGIINGSNARCIALLKVFKQVIRDYTTPANEE LSRDLVNKLKPYISFLTQCRPLSASMGNAIKFLKKEISSLPGTIREEKAKEQLQETIDKYEREKIFLAAEAISKFAFEKI NDGDVILVYGCSSLVSRILCEAHANHRAFRVVVVDSQPRLEGRETLCRLVKQGVRCSYVLINAISYVLPEVSKVLLGAHA LLANGSVMSHRLLCLQ |
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