Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s346_g01651
Locus habu1_scaffold346 : 314596 ... 356637 : +
To GenomeBrowser habu1_scaffold346:314596..356637
Genes list of scaffold habu1_scaffold346

Annotation by Blast2GO
Annotation GO
uridine-cytidine kinase-like 1-like EC:2.7.1.48 GO:0004849 GO:0005524 GO:0006206 GO:0016310 GO:0044206 GO:0044211

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s346_g01651.t2 1 1 PRK 87 272 0.0 194.8 0.0 0.0 194.1
habu1_s346_g01651.t2 1 1 AAA_17 87 235 1.0e-08 36.0 4.7e-11 5.8e-08 33.5
habu1_s346_g01651.t2 1 1 CPT 87 146 1.5e-06 27.9 2.6e-09 3.2e-06 26.8
habu1_s346_g01651.t2 1 1 AAA_18 88 230 6.8e-08 32.8 1.9e-10 2.4e-07 31.1
habu1_s346_g01651.t2 1 1 UPRTase 316 519 0.0 251.5 0.0 0.0 250.7
habu1_s346_g01651.t2 1 1 DnaJ 563 624 1.2e-26 92.2 2.8e-29 3.4e-26 90.7
habu1_s346_g01651.t2 1 1 zf-C3HC4_2 745 800 4.1e-09 36.3 3.3e-12 4.1e-09 36.3

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.3
Venom grand-1 15.2
Pit, infrared sensing 5.3
Nose 4.8
Brain-1 2.7
Eye 4.8
fetal fibroblast 11.2
venom gland-2 10.2
Brain-2 3.5
Spleen 4.1
Lung 3.2
Liver 3.2
Kidney 2.6
Pancreas 5.9
Small intestine 5.2
Large intestine 5.0
Stomach 3.8
heart 37.9
ovary 10.4
cheek muscle 97.6

Transcript
Transcript IDhabu1_s346_g01651.t1
Definition-
>habu1_s346_g01651.t1
atgccaaaacgtggtcctaagcgcgccacgcctcgacgttctcccggcaagctgtgcggctgcaggcagaggactggcgg
gagcatgatggagatggcgtctgcggacggcgtggtcgaggaagctgtcccggctgcgcggcgtagcagcgggagcagag
gagccgccttgaacggccttgtcaaccgcttgccgctcacgccgtcgctttccccaaggaaaaggaccaccagccagtcg
aaaacggagccgccgctgcttcggactagcaagcgcaccatctacacggctggacggccgccctggtacaacgagacggg
cactcctttcaaggaagcctttgtcattggcttgtgtggtggcagtgcatctggcaagactacagtggccaacaaaatca
ttgaagcactagatgtgccttgggtggtgctgctctccatggatagcttctacaaggtactgaacaaagaacagcaagag
caagctgcccgtaatgaatacaattttgaccatcctgatgcctttgattttgacctgctcatcagtgtcctacgaaagct
gaaagagggcaagagcgttaaagttcctgtttatgattttaccacacatagccggagcaaggagtggaaaactatctatg
gggccaatgtaattatatttgaaggtatcctgtcatttgccaataaggagcttctacagctcctggacatgaaagttttt
gtggacacagactcggatatccggcttgtgcggcggttgaagcgggacatcatggaacgagggcgggacgtggcaggtgt
catcaagcagtacagcaagtttgtgaagccgtcctttgagcagtacattgaacctacaatgcaggcagcagacattgtgg
tgcctcgaggtggagagaactttgtggctctggacttgattgttcagcatgttcatagccaattggaaaagcgtgaaatc
acagtcagagcagccttggcctctgctcatcagggacaaccattgccaacaaccttaagtgtcttggagagcacaccgca
ggttcgggggatgcacactattatcaggaacaaggacaccagcagggatgaattcatattctattccaagcgtctcatgc
gactgctgattgaacatgccctttcctttctaccactcaagccagttactgtagagacaccacagggaacaatttatgat
gggaagagattccataggcagcggatcactggaatctccatcctgagagcaggtgagaccatggagcaggctcttacagc
tgtctgcaaagatatccgcttaggaaagattctcatccaaaccaaccatgatacaggggaacctgagctgcattatctcc
ggctgcccaaagagatcagtgaagactacgtcatcctgatggacagcactgtttctactggagctgctgccatgatggct
attcgggtgttgctggatcatgatgtacaagaggacaggatcttcttactgtctctgctgatggcagagatgggagtcca
ttctgtggcttatgctttcccccgtgtacgtatcatcaccactgctgtggacaagagagtcaatgaggaattccacatca
ttcctggcattggtaactttggagaccgttattttggcacagatggcaccatcccctggacacgactgaggagggaggag
aagcggatccagggcgaaaccgaagaaatccagaacaagatggcggaaggaggccggccacagaggaagatgtcacgggc
tggagagagcttatatcacatcctgggcttggaaaagggtgcttccccagaagacatcaagaaagcatacaggaaactgg
ctttgaaataccacccagataagaatcctgataatccagaagcagcagagaagttcaaggagatcaatagcgccaatata
attctcagtgatgagaacaagaggcgcctctatgatgaatacggctccatgggactctatgtgtctgagcagtttgggga
agaaagtgtgaagtattacttcctcatgtccaagtgttggttcaagacattagtagggtgttgtggcatctttacatgtt
gctgttgttgctgctgctgctgtttctgttgtgggaaatgccgcccacctgaagatgatgagtcctacaagtatgtcaat
cctgaagacctggaggcccagatccgtgcagaagataatgcctattggagtgtgctgtgggcaagaattggtgctgcggg
gatgaactttgccgtgggcttcaagccgatgctggggacttcacagagcatggatagcctggagaagcaacttatctgcc
ccatttgtttggagatgttcaccaaaccggtggtcatcctgccctgccaacacaacctctgtcgcaagtgtgccaacgat
atctttcaggcctccaaccccctgtggcagtctcgtggatctacttcagtgtcctcaggaggccgattccggtgcccatc
ctgtcggcatgaagtcgtgctggaccggcatggagtttatggcctgcaacgcaaccttttggtggaaaacataattgata
tctacaagcaagaatcctcccggcctctccatgccaaggcagagcagcagctgatgtgtgaagaacatgaagatgaaaag
atcaacatatactgcttgaactgtgaggttccaacctgctctatgtgcaaagtctttggagcccacaaagactgtgaagt
ggctcctctgaccaacatttataagcgccaaaagggagagttgagtgatggcattgccatgttagtggcagggaatgacc
gtatccaagccatcatcacccaaatggaagagatctgtaaaactattgaggataatgctcggcgacagaagcagcatctt
ggtctgcgctttgactctttgtacagcatcctggaggaacgcaaaaaagagctgttgcaagaaattggacgagagcaaga
ggaaaaagtccaaagggtgcgggggctcatccggcaatatggagaccaccttgaggtctcctctaagctggttgagtcag
ccatccagtccatggaggaaccccagatggccctctatctgcagcagtcaaaggagctgatcaaaaagatcacagatatg
tccaaggtatccatgagcagccgacctgagcctggctatgaaaacatggaccatttctctatcaatgtagatcatgttgc
tgaaatgctgagaactattgaatttcagacagatgtttctggggaggaaactgagtctgaaggaattatcccagaaggag
gtggtgaagctggagaggaagaccatccagaaggatcggaggctcctgaaggagcagaagatggagagaatctgtctcga
ttcagaccaaagctacctagtgcaccacctcggggccaacactgaaaagtcactttgaagacagaagcagctggagaagt
gttccgttcagccccatcccatacttcctcctcctcaccaccagaagtttttattgcttcccactaagttttctttctcc
atgcatctttttcttgcttccttctatgctcctgttctccccataccatttggctttttaatttatgaagacaataaagt
tgtgactttatttgctaaca
Transcript IDhabu1_s346_g01651.t2
Definition-
>habu1_s346_g01651.t2
atgccaaaacgtggtcctaagcgcgccacgcctcgacgttctcccggcaagctgtgcggctgcaggcagaggactggcgg
gagcatgatggagatggcgtctgcggacggcgtggtcgaggaagctgtcccggctgcgcggcgtagcagcgggagcagag
gagccgccttgaacggccttgtcaaccgcttgccgctcacgccgtcgctttccccaaggaaaaggaccaccagccagtcg
aaaacggagccgccgctgcttcggactagcaagcgcaccatctacacggctggacggccgccctggtacaacgagacggg
cactcctttcaaggaagcctttgtcattggcttgtgtggtggcagtgcatctggcaagactacagtggccaacaaaatca
ttgaagcactagatgtgccttgggtggtgctgctctccatggatagcttctacaaggtactgaacaaagaacagcaagag
caagctgcccgtaatgaatacaattttgaccatcctgatgcctttgattttgacctgctcatcagtgtcctacgaaagct
gaaagagggcaagagcgttaaagttcctgtttatgattttaccacacatagccggagcaaggagtggaaaactatctatg
gggccaatgtaattatatttgaaggtatcctgtcatttgccaataaggagcttctacagctcctggacatgaaagttttt
gtggacacagactcggatatccggcttgtgcggcggttgaagcgggacatcatggaacgagggcgggacgtggcaggtgt
catcaagcagtacagcaagtttgtgaagccgtcctttgagcagtacattgaacctacaatgcaggcagcagacattgtgg
tgcctcgaggtggagagaactttgtggctctggacttgattgttcagcatgttcatagccaattggaaaagcgtgaaatc
acagtcagagcagccttggcctctgctcatcagggacaaccattgccaacaaccttaagtgtcttggagagcacaccgca
ggttcgggggatgcacactattatcaggaacaaggacaccagcagggatgaattcatattctattccaagcgtctcatgc
gactgctgattgaacatgccctttcctttctaccactcaagccagttactgtagagacaccacagggaacaatttatgat
gggaagagattccataggcagcggatcactggaatctccatcctgagagcaggtgagaccatggagcaggctcttacagc
tgtctgcaaagatatccgcttaggaaagattctcatccaaaccaaccatgatacaggggaacctgagctgcattatctcc
ggctgcccaaagagatcagtgaagactacgtcatcctgatggacagcactgtttctactggagctgctgccatgatggct
attcgggtgttgctggatcatgatgtacaagaggacaggatcttcttactgtctctgctgatggcagagatgggagtcca
ttctgtggcttatgctttcccccgtgtacgtatcatcaccactgctgtggacaagagagtcaatgaggaattccacatca
ttcctggcattggtaactttggagaccgttattttggcacagatggcaccatcccctggacacgactgaggagggaggag
aagcggatccagggcgaaaccgaagaaatccagaacaagatggcggaaggaggccggccacagaggaagatgtcacgggc
tggagagagcttatatcacatcctgggcttggaaaagggtgcttccccagaagacatcaagaaagcatacaggaaactgg
ctttgaaataccacccagataagaatcctgataatccagaagcagcagagaagttcaaggagatcaatagcgccaatata
attctcagtgatgagaacaagaggcgcctctatgatgaatacggctccatgggactctatgtgtctgagcagtttgggga
agaaagtgtgaagtattacttcctcatgtccaagtgttggttcaagacattagtagggtgttgtggcatctttacatgtt
gctgttgttgctgctgctgctgtttctgttgtgggaaatgccgcccacctgaagatgatgagtcctacaagtatgtcaat
cctgaagacctggaggcccagatccgtgcagaagataatgcctattggagtgtgctgtgggcaagaattggtgctgcggg
gatgaactttgccgtgggcttcaagccgatgctggggacttcacagagcatggatagcctggagaagcaacttatctgcc
ccatttgtttggagatgttcaccaaaccggtggtcatcctgccctgccaacacaacctctgtcgcaagtgtgccaacgat
atctttcaggcctccaaccccctgtggcagtctcgtggatctacttcagtgtcctcaggaggccgattccggtgcccatc
ctgtcggcatgaagtcgtgctggaccggcatggagtttatggcctgcaacgcaaccttttggtggaaaacataattgata
tctacaagcaagaatcctcccggcctctccatgccaaggcagagcagcagctgatgtgtgaagaacatgaagatgaaaag
atcaacatatactgcttgaactgtgaggttccaacctgctctatgtgcaaagtctttggagcccacaaagactgtgaagt
ggctcctctgaccaacatttataagcgccaaaagggagagttgagtgatggcattgccatgttagtggcagggaatgacc
gtatccaagccatcatcacccaaatggaagagatctgtaaaactattgaggataatgctcggcgacagaagcagcatctt
ggtctgcgctttgactctttgtacagcatcctggaggaacgcaaaaaagagctgttgcaagaaattggacgagagcaaga
ggaaaaagtccaaagggtgcgggggctcatccggcaatatggagaccaccttgaggtctcctctaagctggttgagtcag
ccatccagtccatggaggaaccccagatggccctctatctgcagcagtcaaaggagctgatcaaaaagatcacagatatg
tccaaggtatccatgagcagccgacctgagcctggctatgaaaacatggaccatttctctatcaatgtagatcatgttgc
tgaaatgctgagaactattgaatttcagacagatgtttctggggaggaaactgagtctgaaggaattatcccagaaggag
gtggtgaagctggagaggaagaccatccagaaggatcggaggctcctgaaggagcagaagatggagagaatctgtctcga
ttcagaccaaagctacctagtgcaccacctcgggctttctgagtgaataaaggaattgaaagaagaggatttgttaccag
gaaaggatagtgtgcccatcagtgagctttcctgctttgacttggacattcataaggcctggatcagctgggaagcactc
tggcacattttatttcccactggatgtgtaccttgtttcttccatcaggccaacactgaaaagtcactttgaagacagaa
gcagctggagaagtgttccgttcagccccatcccatacttcctcctcctcaccaccagaagtttttattgcttcccacta
agttttctttctccatgcatctttttcttgcttccttctatgctcctgttctccccataccatttggctttttaatttat
gaagacaataaagttgtgactttatttgctaaca

Protein
Protein IDhabu1_s346_g01651.t1
Definition-
>habu1_s346_g01651.t1
MMEMASADGVVEEAVPAARRSSGSRGAALNGLVNRLPLTPSLSPRKRTTSQSKTEPPLLRTSKRTIYTAGRPPWYNETGT
PFKEAFVIGLCGGSASGKTTVANKIIEALDVPWVVLLSMDSFYKVLNKEQQEQAARNEYNFDHPDAFDFDLLISVLRKLK
EGKSVKVPVYDFTTHSRSKEWKTIYGANVIIFEGILSFANKELLQLLDMKVFVDTDSDIRLVRRLKRDIMERGRDVAGVI
KQYSKFVKPSFEQYIEPTMQAADIVVPRGGENFVALDLIVQHVHSQLEKREITVRAALASAHQGQPLPTTLSVLESTPQV
RGMHTIIRNKDTSRDEFIFYSKRLMRLLIEHALSFLPLKPVTVETPQGTIYDGKRFHRQRITGISILRAGETMEQALTAV
CKDIRLGKILIQTNHDTGEPELHYLRLPKEISEDYVILMDSTVSTGAAAMMAIRVLLDHDVQEDRIFLLSLLMAEMGVHS
VAYAFPRVRIITTAVDKRVNEEFHIIPGIGNFGDRYFGTDGTIPWTRLRREEKRIQGETEEIQNKMAEGGRPQRKMSRAG
ESLYHILGLEKGASPEDIKKAYRKLALKYHPDKNPDNPEAAEKFKEINSANIILSDENKRRLYDEYGSMGLYVSEQFGEE
SVKYYFLMSKCWFKTLVGCCGIFTCCCCCCCCCFCCGKCRPPEDDESYKYVNPEDLEAQIRAEDNAYWSVLWARIGAAGM
NFAVGFKPMLGTSQSMDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNPLWQSRGSTSVSSGGRFRCPSC
RHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKAEQQLMCEEHEDEKINIYCLNCEVPTCSMCKVFGAHKDCEVA
PLTNIYKRQKGELSDGIAMLVAGNDRIQAIITQMEEICKTIEDNARRQKQHLGLRFDSLYSILEERKKELLQEIGREQEE
KVQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMALYLQQSKELIKKITDMSKVSMSSRPEPGYENMDHFSINVDHVAE
MLRTIEFQTDVSGEETESEGIIPEGGGEAGEEDHPEGSEAPEGAEDGENLSRFRPKLPSAPPRGQH
Protein IDhabu1_s346_g01651.t2
Definition-
>habu1_s346_g01651.t2
MMEMASADGVVEEAVPAARRSSGSRGAALNGLVNRLPLTPSLSPRKRTTSQSKTEPPLLRTSKRTIYTAGRPPWYNETGT
PFKEAFVIGLCGGSASGKTTVANKIIEALDVPWVVLLSMDSFYKVLNKEQQEQAARNEYNFDHPDAFDFDLLISVLRKLK
EGKSVKVPVYDFTTHSRSKEWKTIYGANVIIFEGILSFANKELLQLLDMKVFVDTDSDIRLVRRLKRDIMERGRDVAGVI
KQYSKFVKPSFEQYIEPTMQAADIVVPRGGENFVALDLIVQHVHSQLEKREITVRAALASAHQGQPLPTTLSVLESTPQV
RGMHTIIRNKDTSRDEFIFYSKRLMRLLIEHALSFLPLKPVTVETPQGTIYDGKRFHRQRITGISILRAGETMEQALTAV
CKDIRLGKILIQTNHDTGEPELHYLRLPKEISEDYVILMDSTVSTGAAAMMAIRVLLDHDVQEDRIFLLSLLMAEMGVHS
VAYAFPRVRIITTAVDKRVNEEFHIIPGIGNFGDRYFGTDGTIPWTRLRREEKRIQGETEEIQNKMAEGGRPQRKMSRAG
ESLYHILGLEKGASPEDIKKAYRKLALKYHPDKNPDNPEAAEKFKEINSANIILSDENKRRLYDEYGSMGLYVSEQFGEE
SVKYYFLMSKCWFKTLVGCCGIFTCCCCCCCCCFCCGKCRPPEDDESYKYVNPEDLEAQIRAEDNAYWSVLWARIGAAGM
NFAVGFKPMLGTSQSMDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNPLWQSRGSTSVSSGGRFRCPSC
RHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKAEQQLMCEEHEDEKINIYCLNCEVPTCSMCKVFGAHKDCEVA
PLTNIYKRQKGELSDGIAMLVAGNDRIQAIITQMEEICKTIEDNARRQKQHLGLRFDSLYSILEERKKELLQEIGREQEE
KVQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMALYLQQSKELIKKITDMSKVSMSSRPEPGYENMDHFSINVDHVAE
MLRTIEFQTDVSGEETESEGIIPEGGGEAGEEDHPEGSEAPEGAEDGENLSRFRPKLPSAPPRAF

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