Gene
| Gene Model ID | habu1_s346_g01652 |
|---|---|
| Locus | habu1_scaffold346 : 358293 ... 359295 : - |
| To GenomeBrowser | habu1_scaffold346:358293..359295 |
| Genes list of scaffold | habu1_scaffold346 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| urocortin 1 precursor | GO:0005179 GO:0005576 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s346_g01652.t1 | 1 | 1 | CRF | 97 | 135 | 1.2e-14 | 54.0 | 1.6e-18 | 1.2e-14 | 54.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s346_g01652.t1 | gi|602628021|ref|XP_007420952.1| | PREDICTED: urocortin [Python bivittatus] | 0.0 |
| habu1_s346_g01652.t1 | gi|556988222|ref|XP_005999303.1| | PREDICTED: UI-like [Latimeria chalumnae] | 4.0e-15 |
| habu1_s346_g01652.t1 | gi|147899278|ref|NP_001086429.1| | urocortin 1 precursor [Xenopus laevis] | 1.0e-14 |
| habu1_s346_g01652.t1 | gi|507958787|ref|XP_004686417.1| | PREDICTED: urocortin [Condylura cristata] | 2.0e-12 |
| habu1_s346_g01652.t1 | gi|296224274|ref|XP_002757988.1| | PREDICTED: urocortin [Callithrix jacchus] | 2.0e-12 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.3 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 3.8 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.1 |
| ovary | 0.0 |
| cheek muscle | 1.3 |
Transcript
| Transcript ID | habu1_s346_g01652.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01652.t1 tcccggctccgcaaggacacatcgcggcccggaccgcctcagcatgaggcgggcgcagctgcccagcctcctggcctcgc tgctcctcctggcctcgcaagtgtccctcggagccggaccagcggccgacctcgaggggagcgcagaaagcgacctgacc ctgcggctgcggttccccgaggaaaaccgcgccggatcccgccagccgctgcaacctgttcccgagccagacggggcgag cccgtggctgccatctcagcaccgtctgtctccggagggagaagagctgcgtcgacgcctcgccgaactgagcgaccgac tcaaacgccacgagccgccactctcgatcgacctcaccttccacctcctccgccacatgatggagatctcccgggcgcag agccagcaagcccaggcagagttgaaccgtcaactcttggactcggtaggcaagtgaagccgtcggcgagggcacgcgag agagcctcgcttttgtgagccgatccagcaacttgaatcgcccccccgcttccttaggcatcgcttgccccaactccggc gccttcgcagaagacatttgtttatgaaataaaacttcttgggcgtcaaacgatt |
|
Protein
| Protein ID | habu1_s346_g01652.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01652.t1 MRRAQLPSLLASLLLLASQVSLGAGPAADLEGSAESDLTLRLRFPEENRAGSRQPLQPVPEPDGASPWLPSQHRLSPEGE ELRRRLAELSDRLKRHEPPLSIDLTFHLLRHMMEISRAQSQQAQAELNRQLLDSVGK |
|