Gene
| Gene Model ID | habu1_s346_g01653 |
|---|---|
| Locus | habu1_scaffold346 : 363997 ... 374445 : - |
| To GenomeBrowser | habu1_scaffold346:363997..374445 |
| Genes list of scaffold | habu1_scaffold346 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein mpv17 | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s346_g01653.t3 | 1 | 1 | Mpv17_PMP22 | 110 | 176 | 4.4e-25 | 87.1 | 5.9e-29 | 8.7e-25 | 86.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.2 |
| Venom grand-1 | 0.7 |
| Pit, infrared sensing | 3.9 |
| Nose | 4.0 |
| Brain-1 | 1.3 |
| Eye | 3.2 |
| fetal fibroblast | 12.0 |
| venom gland-2 | 4.6 |
| Brain-2 | 2.6 |
| Spleen | 1.9 |
| Lung | 0.9 |
| Liver | 2.6 |
| Kidney | 2.6 |
| Pancreas | 1.3 |
| Small intestine | 1.0 |
| Large intestine | 2.5 |
| Stomach | 1.6 |
| heart | 2.0 |
| ovary | 24.2 |
| cheek muscle | 2.7 |
Transcript
| Transcript ID | habu1_s346_g01653.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01653.t1 gggaagccgtgagaaaagtttaagtatacgtgaagttgggaagtatatacccggtgtctgtggtgcctccggcggcagat tttgtgagaagctgtgttaggtgacatggcaactttttggagagcctaccaaagattgatggtccagcacccctggaagg tgcaaatcatcacagctgggaccctcatgggtgctggagatgtgatttcacagcagatgattgaaagaagagggctgtct gggcacagtggctggcggaccctaaaaatgatgagcattggattttgctttgtgggcccagtcattggaaaatggtacca agtcctggatcgtctagtgctcggcaaaaccagagtggctgcactccagaagatgctgctggatcaggttggatttgcac cctgcttcctggcctgttttctgactgtggcgggaacactcaatggcctatccttgaaagagaactggagcaagctcaag aaggactaccctgatgccctgatcaccaactactatatttggccagcagtgcaggttgccaacttctacttcatcccctt gaactacagacttcctgtggttcagtgtgttgccattatctggaacagttatctttcctggaaagccaataaactataat ctggcatgggaagacatgagaactatgcttaatcctattagaacacctgcagattttctttactcgctgttcttcatgca ttgcaaacagatgaacaacccaggatgcataccatactgtatatcagccaccagcccaatcaaccagcatatgcaactgc acaaagatatattcgtgtgaaaaagccccaagtgttccctgaaaaggagaattggacaaaataaacctctgctctgcata ctctatt |
|
| Transcript ID | habu1_s346_g01653.t2 |
| Definition | - |
>habu1_s346_g01653.t2 gcgggcagggattggatgttttcctttgcctagaagaggcgagtgtgcgcataaaaaggcattctagttgggaccctcat gggtgctggagatgtgatttcacagcagatgattgaaagaagagggctgtctgggcacagtggctggcggaccctaaaaa tgatgagcattggattttgctttgtgggcccagtcattggaaaatggtaccaagtcctggatcgtctagtgctcggcaaa accagagtggctgcactccagaagatgctgctggatcaggttggatttgcaccctgcttcctggcctgttttctgactgt ggcgggaacactcaatggcctatccttgaaagagaactggagcaagctcaagaaggactaccctgatgccctgatcacca actactatatttggccagcagtgcaggttgccaacttctacttcatccccttgaactacagacttcctgtggttcagtgt gttgccattatctggaacagttatctttcctggaaagccaataaactataatctggcatgggaagacatgagaactatgc ttaatcctattagaacacctgcagattttctttactcgctgttcttcatgcattgcaaacagatgaacaacccaggatgc ataccatactgtatatcagccaccagcccaatcaaccagcatatgcaactgcacaaagatatattcgtgtgaaaaagccc caagtgttccctgaaaaggagaattggacaaaataaacctctgctctgcatactctatt |
|
| Transcript ID | habu1_s346_g01653.t3 |
| Definition | - |
>habu1_s346_g01653.t3 gcgggcagggattggatgttttcctttgcctagaagaggcgagtgtgcgcataaaaaggcattctagttgaagctgtgtt aggtgacatggcaactttttggagagcctaccaaagattgatggtccagcacccctggaaggtgcaaatcatcacagctg ggaccctcatgggtgctggagatgtgatttcacagcagatgattgaaagaagagggctgtctgggcacagtggctggcgg accctaaaaatgatgagcattggattttgctttgtgggcccagtcattggaaaatggtaccaagtcctggatcgtctagt gctcggcaaaaccagagtggctgcactccagaagatgctgctggatcaggttggatttgcaccctgcttcctggcctgtt ttctgactgtggcgggaacactcaatggcctatccttgaaagagaactggagcaagctcaagaaggactaccctgatgcc ctgatcaccaactactatatttggccagcagtgcaggttgccaacttctacttcatccccttgaactacagacttcctgt ggttcagtgtgttgccattatctggaacagttatctttcctggaaagccaataaactataatctggcatgggaagacatg agaactatgcttaatcctattagaacacctgcagattttctttactcgctgttcttcatgcattgcaaacagatgaacaa cccaggatgcataccatactgtatatcagccaccagcccaatcaaccagcatatgcaactgcacaaagatatattcgtgt gaaaaagccccaagtgttccctgaaaaggagaattggacaaaataaacctctgctctgcatactctatt |
|
Protein
| Protein ID | habu1_s346_g01653.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01653.t1 MATFWRAYQRLMVQHPWKVQIITAGTLMGAGDVISQQMIERRGLSGHSGWRTLKMMSIGFCFVGPVIGKWYQVLDRLVLG KTRVAALQKMLLDQVGFAPCFLACFLTVAGTLNGLSLKENWSKLKKDYPDALITNYYIWPAVQVANFYFIPLNYRLPVVQ CVAIIWNSYLSWKANKL |
|
| Protein ID | habu1_s346_g01653.t2 |
| Definition | - |
>habu1_s346_g01653.t2 MIERRGLSGHSGWRTLKMMSIGFCFVGPVIGKWYQVLDRLVLGKTRVAALQKMLLDQVGFAPCFLACFLTVAGTLNGLSL KENWSKLKKDYPDALITNYYIWPAVQVANFYFIPLNYRLPVVQCVAIIWNSYLSWKANKL |
|
| Protein ID | habu1_s346_g01653.t3 |
| Definition | - |
>habu1_s346_g01653.t3 MATFWRAYQRLMVQHPWKVQIITAGTLMGAGDVISQQMIERRGLSGHSGWRTLKMMSIGFCFVGPVIGKWYQVLDRLVLG KTRVAALQKMLLDQVGFAPCFLACFLTVAGTLNGLSLKENWSKLKKDYPDALITNYYIWPAVQVANFYFIPLNYRLPVVQ CVAIIWNSYLSWKANKL |
|