Gene
| Gene Model ID | habu1_s346_g01657 |
|---|---|
| Locus | habu1_scaffold346 : 460567 ... 467509 : + |
| To GenomeBrowser | habu1_scaffold346:460567..467509 |
| Genes list of scaffold | habu1_scaffold346 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s346_g01657.t1 | 2 | 1 | WD40 | 164 | 187 | 1.9e-14 | 52.8 | 1.8e-07 | 0.0014 | 18.4 |
| habu1_s346_g01657.t1 | 2 | 2 | WD40 | 193 | 227 | 1.9e-14 | 52.8 | 5.3e-09 | 3.9e-05 | 23.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s346_g01657.t1 | gi|602639446|ref|XP_007426543.1| | PREDICTED: prolactin regulatory element-binding protein [Python bivittatus] | 0.0 |
| habu1_s346_g01657.t1 | gi|557318495|ref|XP_006032436.1| | PREDICTED: prolactin regulatory element-binding protein [Alligator sinensis] | 0.0 |
| habu1_s346_g01657.t1 | gi|564269771|ref|XP_006273654.1| | PREDICTED: prolactin regulatory element-binding protein [Alligator mississippiensis] | 0.0 |
| habu1_s346_g01657.t1 | gi|543379168|ref|XP_005532782.1| | PREDICTED: prolactin regulatory element-binding protein [Pseudopodoces humilis] | 0.0 |
| habu1_s346_g01657.t1 | gi|527244947|ref|XP_005140816.1| | PREDICTED: prolactin regulatory element-binding protein [Melopsittacus undulatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 12.5 |
| Venom grand-1 | 30.5 |
| Pit, infrared sensing | 14.9 |
| Nose | 18.5 |
| Brain-1 | 7.4 |
| Eye | 12.0 |
| fetal fibroblast | 13.7 |
| venom gland-2 | 60.4 |
| Brain-2 | 7.7 |
| Spleen | 6.8 |
| Lung | 7.7 |
| Liver | 13.0 |
| Kidney | 8.6 |
| Pancreas | 5.0 |
| Small intestine | 9.9 |
| Large intestine | 8.9 |
| Stomach | 7.4 |
| heart | 6.2 |
| ovary | 18.7 |
| cheek muscle | 6.8 |
Transcript
| Transcript ID | habu1_s346_g01657.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01657.t1 cgacgtgtgctgagaattctgcgcctgcgcaatgtcaaggaggtcggatctgcgcatgcctagtcgagatcaaagtgctg ttgtgcagagttacgctagagaggagggggagtcgaggaaagaacaacttagtgcggaattggcatgagctgacctttga ccccgctgaccccggcttcgctgatccagtcatgccccctcgtcggccgcccgagctctaccgggctccgttcccgctct atgccctgcgcatacaccgtgaagctggactggcgctaatcgcggggggaggcggcgccgccaagactgggatcacgaat ggcttgcatttcttgcagttggactggagagaaggcaagttatctgcctcactactacatgctcatgacacagagacccg ggccaccatgactatggcactggcaggaaatttcattgctgcagggcaggatgctacttgccacatcctgagtttccagc tctttaaatccgggcagaaaacaggtggcagcagcggtgatagtgctaaagcaggtgctggtgataaaaatctaaggaga cgcaagccccccatccccagtgagaagagcaacggcagtacacacacagagatgacagaggtggcagtggaaactttgca ctgtgtccaaacagacaccagcccagatactctccagaaggctgtgtgcttcagtgatgatcatacccttctggctaccg gtggtgtggatggtttcctgcgagtctgggagtttcccagcatgaagaaaactcttgaattccaggcacacaatggtgag atagaggatatagcactgagtcctgataacaaggtggtgacagtgggacgggacttccagtgttgtgtgtggcaacgaga tcagatggtgacgggtctgcgttggaatgaaaatcttccaggcattccagacaagacctaccgctaccagtcttgcaagt ttggtacagttgaagaccaagccaaggcattgcgactgtacacagtgcagatcccttacaaacgtgaacgacgtccgctt ccctgctacatcaccaagtgggatggacatagtttcttgcccctgcttactcgtccctgtggcaatgaggtcatctcatg cctctctgtaagtgagacaggcacattcctgggtttgggcactgtcacaggctcggttgccatcttcgtcgccttttctt tgcagagggtgtactacgtgcgagaagcacatggcatagtggtcactgctgtgtccttcctgcctgagactccggaactg ctcaagagcaatgaggcagccctgctaagtgtggcagttgacagccgctgccgcctgcaccagattgcctgccggcggag tttccccatctggctcctgctgctcttttgtgctgggctgattgtgggcacagtcctgttactacagctggccttcccag ggttcctctaacctttcttcgtgattgattacttattttgtgacttgggaagtatgtgaacaatatcatacttgttcaat tattttaaattcccagagttttattaggtcaccactttttcatagaagtaaaaaatcatgactgctgatgtggtatgctg gcatttgccaatcaaaaaaatgaaagtgatcacaacctgaaaagaatgcttggataggtggttctgtatcctgcatcaat gcttgtttttatcagggaagcaagagagggaataaatcttccttgagagtccaggtac |
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Protein
| Protein ID | habu1_s346_g01657.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01657.t1 MPPRRPPELYRAPFPLYALRIHREAGLALIAGGGGAAKTGITNGLHFLQLDWREGKLSASLLHAHDTETRATMTMALAGN FIAAGQDATCHILSFQLFKSGQKTGGSSGDSAKAGAGDKNLRRRKPPIPSEKSNGSTHTEMTEVAVETLHCVQTDTSPDT LQKAVCFSDDHTLLATGGVDGFLRVWEFPSMKKTLEFQAHNGEIEDIALSPDNKVVTVGRDFQCCVWQRDQMVTGLRWNE NLPGIPDKTYRYQSCKFGTVEDQAKALRLYTVQIPYKRERRPLPCYITKWDGHSFLPLLTRPCGNEVISCLSVSETGTFL GLGTVTGSVAIFVAFSLQRVYYVREAHGIVVTAVSFLPETPELLKSNEAALLSVAVDSRCRLHQIACRRSFPIWLLLLFC AGLIVGTVLLLQLAFPGFL |
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