Gene
| Gene Model ID | habu1_s346_g01659 |
|---|---|
| Locus | habu1_scaffold346 : 481757 ... 492576 : + |
| To GenomeBrowser | habu1_scaffold346:481757..492576 |
| Genes list of scaffold | habu1_scaffold346 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s346_g01659.t3 | 1 | 1 | EF-hand_7 | 78 | 140 | 3.3e-06 | 27.1 | 1.1e-09 | 5.4e-06 | 26.4 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.2 |
| Venom grand-1 | 0.9 |
| Pit, infrared sensing | 8.0 |
| Nose | 3.0 |
| Brain-1 | 6.0 |
| Eye | 3.8 |
| fetal fibroblast | 3.5 |
| venom gland-2 | 0.5 |
| Brain-2 | 7.9 |
| Spleen | 0.8 |
| Lung | 1.2 |
| Liver | 0.8 |
| Kidney | 4.4 |
| Pancreas | 0.3 |
| Small intestine | 2.1 |
| Large intestine | 5.8 |
| Stomach | 4.3 |
| heart | 2.2 |
| ovary | 0.8 |
| cheek muscle | 0.9 |
Transcript
| Transcript ID | habu1_s346_g01659.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01659.t1 cgccaggagaagaaagagaaggcctctctctacgccccccctcccgcccaagcctaccacgcggatccgcgctgcctgga gaatttggtagcggtgttcattccagagagatatttctacctccagtgacctgcagaacgtgaactgaagtgtctcgccc ctgcccaccagcaccagaatgaaggagctatttctagcagtttggttcttcgttgtgccaatcagctgggcagcaccaaa gaacagcagtggcaggcctgagatcccccacgattccatggatcaacccatcctaaatcctctgcacccaagccaagttt ctcttaaggtgctccaagactatctggagaacattggacagttgaatggggatgctgctaccatgacaagggaacaggcg ctcttgcttctctttgctcttcatgattatgacaaaagtgggcacttggatggtctggaattcatgaggctgctgagtga attggtgtcccaacaggcaaaaggacagcctgcatcagatatggtagtgccaatggtggacagtatcttggagactcagg acttcaactgggatggactattggagccttcagagttgtttcttcctccccggcagggagagaaaccaaacttccttacc tctgtcagtgaagaagatggccaagtcctgtgggcacttcctaagccaaatgaaccagccattggtttcccaagtccctc tgaccaacaaagcaatggaggctccccacctgcaccagcagttcaggagcaagacatgatgggtgaccagttgtggagcc tggagaagcatggggaagagctcggccaggaaaccgcaggagacccagatcaacaaggggaagagatgccttctgctcca ggagattgaaatataccctgtgcataaccttaggtga |
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| Transcript ID | habu1_s346_g01659.t2 |
| Definition | - |
>habu1_s346_g01659.t2 aagagttgctgggcactaggtttttcctcgctggctgcgttccctgcagctggagcactagcagtgggaaaagataggga agactgtgccacgtccacctgcaggtagcggtgttcattccagagagatatttctacctccagtgacctgcagaacgtga actgaagtgtctcgcccctgcccaccagcaccagaatgaaggagctatttctagcagtttggttcttcgttgtgccaatc agctgggcagcaccaaagaacagcagtggcaggcctgagatcccccacgattccatggatcaacccatcctaaatcctct gcacccaagccaagtttctcttaaggtgctccaagactatctggagaacattggacagttgaatggggatgctgctacca tgacaagggaacaggcgctcttgcttctctttgctcttcatgattatgacaaaagtgggcacttggatggtctggaattc atgaggctgctgagtgaattggtgtcccaacaggcaaaaggacagcctgcatcagatatggtagtgccaatggtggacag tatcttggagactcaggacttcaactgggatggactattggagccttcagagttgtttcttcctccccggcagggagaga aaccaaacttccttacctctgtcagtgaagaagatggccaagtcctgtgggcacttcctaagccaaatgaaccagccatt ggtttcccaagtccctctgaccaacaaagcaatggaggctccccacctgcaccagcagttcaggagcaagacatgatggg tgaccagttgtggagcctggagaagcatggggaagagctcggccaggaaaccgcaggagacccagatcaacaaggggaag agatgccttctgctccaggagattgaaatataccctgtgcataaccttaggtga |
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| Transcript ID | habu1_s346_g01659.t3 |
| Definition | - |
>habu1_s346_g01659.t3 cgccaggagaagaaagagaaggcctctctctacgccccccctcccgcccaagcctaccacgcggatccgcgctgcctgga gaatttggtagcggtgttcattccagagagatatttctacctccagtgacctgcagaacgtgaactgaagtgtctcgccc ctgcccaccagcaccagaatgaaggagctatttctagcagtttggttcttcgttgtgccaatcagctgggcagcaccaaa gaacagcagtggcaggcctgagatcccccacgattccatggatcaacccatcctaaatcctctgcacccaagccaagttt ctcttaaggtgctccaagactatctggagaacattggacagttgaatggggatgctgctaccatgacaagggaacaggcg ctcttgcttctctttgctcttcatgattatgacaaaagtgggcacttggatggtctggaattcatgaggctgctgagtga attggtgtcccaacaggcaaaaggacagcctgcatcagatatggtagtgccaatggtggacagtatcttggagactcagg acttcaactgggatggactattggagccttcagagttgtttcttcctccccggcagggagagaaaccaaacttccttacc tctgtcagtgaagaagatggccaagtcctgtgggcacttcctaagccaaatgaaccagccattggtttcccaagtccctc tgaccaacaaagcaatggaggctccccacctgcaccagcagttcaggagcaagacatgatgggtgaccagttgtggagcc tggagaagcatggggaagagctcggccaggaaaccgcaggagacccagatcaacaaggggaagagatgccttctgctcca ggagattgaaatataccctgtgcataaccttagaattacttgcataatgaaccaggagcaatcagcaacctcaagtattt tatttatcttttcatgttcatacagcgaaatctcttttcctcctggcaagagacaggagcatctgagccagctcagccag actgcatatggaatgtgtggcaggcagcctgacatgtcttcccacctgcaggagatgccagaggagcagtgccattgcca ctagcaaatagaacacaaccgtgagaaatacagtattagtccatggtccagtgaaatccagcaggtccagttttcagcat gttgctcacacgattccatcatagccgtgaaccccacacttccggcctgccacctggcatccataggttaatgctgcagg aagtgtttttcctgccacagaaagtgagaaatcagtttaactttagggcagatgggcataattgctcttctttaaagtac aagagatggaggaatgatggccaggagtttcctcaccattcagatcttcttgatgctattagatagtggtttattgtgca acttaaaagtattctgtccgagacacacaagcaattgtaaagggttctgccactcatgctatatccacaagaaaatgaga agcacccagaacttacccttgcttagagccaggatcacagcagcattgaatgtgtctccagcccccagagtgtccacaac agtttcaggggagactgcatctgaatgcaccagcagcccatctggtcccattgcatcagctccatactcagcccaagcac agaccaaagtagctctagaaatggaccgataaggtaggtggttcgctatgggatgagtgagaatcccaaaatacagaagg atatggaatatagaaactaatctatatagtgttttggattcatcaaatgaataaatctaaattactacacaagcaggcag atgcccgaatgtattccttgtctgcaatattccaaaccatatgatctcaggaaaaaagtaaagatgcttccaggtgttgc agaaagatggcacattttcacacctgtctgcttcatagtattttggtgggactgaatccaaagcattggaccagcattaa tagatatttccctccccattcttccatacaaaacattctctattccagctatttgggacctcatcagcaaatctgaagga gtgtgagttactgatagagactttgccacataactggggaggctgactcttgattgtccacccatttcaaaaattttccc cgggcgagaagctgcatctgtcttgagctttcctttcagctctcaatagggaagtctgtgcaactcagcctttggcctaa acagaaagaaagatagaagaccttcaagggaacactagataggaaggcatgatataaatctaatcaataaagtattaaaa aattgtgcttctg |
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Protein
| Protein ID | habu1_s346_g01659.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01659.t1 MKELFLAVWFFVVPISWAAPKNSSGRPEIPHDSMDQPILNPLHPSQVSLKVLQDYLENIGQLNGDAATMTREQALLLLFA LHDYDKSGHLDGLEFMRLLSELVSQQAKGQPASDMVVPMVDSILETQDFNWDGLLEPSELFLPPRQGEKPNFLTSVSEED GQVLWALPKPNEPAIGFPSPSDQQSNGGSPPAPAVQEQDMMGDQLWSLEKHGEELGQETAGDPDQQGEEMPSAPGD |
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| Protein ID | habu1_s346_g01659.t2 |
| Definition | - |
>habu1_s346_g01659.t2 MKELFLAVWFFVVPISWAAPKNSSGRPEIPHDSMDQPILNPLHPSQVSLKVLQDYLENIGQLNGDAATMTREQALLLLFA LHDYDKSGHLDGLEFMRLLSELVSQQAKGQPASDMVVPMVDSILETQDFNWDGLLEPSELFLPPRQGEKPNFLTSVSEED GQVLWALPKPNEPAIGFPSPSDQQSNGGSPPAPAVQEQDMMGDQLWSLEKHGEELGQETAGDPDQQGEEMPSAPGD |
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| Protein ID | habu1_s346_g01659.t3 |
| Definition | - |
>habu1_s346_g01659.t3 MKELFLAVWFFVVPISWAAPKNSSGRPEIPHDSMDQPILNPLHPSQVSLKVLQDYLENIGQLNGDAATMTREQALLLLFA LHDYDKSGHLDGLEFMRLLSELVSQQAKGQPASDMVVPMVDSILETQDFNWDGLLEPSELFLPPRQGEKPNFLTSVSEED GQVLWALPKPNEPAIGFPSPSDQQSNGGSPPAPAVQEQDMMGDQLWSLEKHGEELGQETAGDPDQQGEEMPSAPGD |
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