Gene
| Gene Model ID | habu1_s346_g01661 |
|---|---|
| Locus | habu1_scaffold346 : 524907 ... 540125 : + |
| To GenomeBrowser | habu1_scaffold346:524907..540125 |
| Genes list of scaffold | habu1_scaffold346 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cgmp-dependent protein kinase 1-like | GO:0005952 GO:0008603 GO:0045859 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s346_g01661.t1 | 2 | 1 | cNMP_binding | 69 | 149 | 2.9e-31 | 107.1 | 2.4e-24 | 1.8e-20 | 72.5 |
| habu1_s346_g01661.t1 | 2 | 2 | cNMP_binding | 184 | 232 | 2.9e-31 | 107.1 | 6.8e-12 | 5.1e-08 | 32.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s346_g01661.t1 | gi|637374818|ref|XP_008122727.1| | PREDICTED: cGMP-dependent protein kinase 1-like [Anolis carolinensis] | 0.0 |
| habu1_s346_g01661.t1 | gi|564269822|ref|XP_006273679.1| | PREDICTED: cGMP-dependent protein kinase 1-like [Alligator mississippiensis] | 0.0 |
| habu1_s346_g01661.t1 | gi|557318515|ref|XP_006032446.1| | PREDICTED: cGMP-dependent protein kinase 1-like [Alligator sinensis] | 0.0 |
| habu1_s346_g01661.t1 | gi|641785001|ref|XP_008174777.1| | PREDICTED: cGMP-dependent protein kinase 1-like [Chrysemys picta bellii] | 0.0 |
| habu1_s346_g01661.t1 | gi|729736305|ref|XP_010564215.1| | PREDICTED: cGMP-dependent protein kinase 1-like [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.6 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 1.3 |
| Nose | 3.9 |
| Brain-1 | 8.9 |
| Eye | 0.3 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.0 |
| Brain-2 | 8.4 |
| Spleen | 2.1 |
| Lung | 0.3 |
| Liver | 0.9 |
| Kidney | 1.8 |
| Pancreas | 5.8 |
| Small intestine | 0.6 |
| Large intestine | 1.0 |
| Stomach | 0.1 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s346_g01661.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01661.t1 acgggatctgcgccttcaggaggaaagggagtttctggagagcgtggcgctaccccagccagttaattcagagcatgctc cagggccaatgaatgagagtgctctggatcactccccaatggaagaagccagaagaggcagggggaaagtcattgtccct gagccccttattactgatgctgattggcagatgccatgtgtccccaaatccccaagagatgccagtctaattctggaagc agttaaacgcaatgaattcctgcggtgtctgggtgatggtcagagccagacactagtggagagcttcacttcagagcagc gccagcctggtgacactgtagtggctgagggcgatgagggacatgctatgtacatcgtggctgagggggagctcggtgtg acgcagaaggggcgccatctccgcaggctgctcccaggggatgtgtttggagagctggctgtgctgtacaactgccagcg cacggcaactgtcatggcactcactgtggtgcagttgtgggccattgaccgacagatatatcgcagcatcatcacagaaa acgccaagcggaaacgtgctttggcccttgcaggcttgcgaggggtgaagcctctccaaggcctgtctgatgccgctctc tcacagctgctggactctgcagaagaggttgaggtgacccggaatgtagatggacaggaggagcacatccgagtgctaaa ggctggagaccactttggggagctttccctcatccgcaacatccgccggacagccagctgtcgagcacagggtgaagtaa cctgcattgcagtagctaaaga |
|
Protein
| Protein ID | habu1_s346_g01661.t1 |
|---|---|
| Definition | - |
>habu1_s346_g01661.t1 MEEARRGRGKVIVPEPLITDADWQMPCVPKSPRDASLILEAVKRNEFLRCLGDGQSQTLVESFTSEQRQPGDTVVAEGDE GHAMYIVAEGELGVTQKGRHLRRLLPGDVFGELAVLYNCQRTATVMALTVVQLWAIDRQIYRSIITENAKRKRALALAGL RGVKPLQGLSDAALSQLLDSAEEVEVTRNVDGQEEHIRVLKAGDHFGELSLIRNIRRTASCRAQGEVTCIAVAK |
|