Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s3505_g11926
Locus habu1_scaffold3505 : 7694 ... 43435 : -
To GenomeBrowser habu1_scaffold3505:7694..43435
Genes list of scaffold habu1_scaffold3505

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s3505_g11926.t2 gi|733923179|ref|XP_010722955.1| PREDICTED: putative protein PTGES3L isoform X2 [Meleagris gallopavo] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 8.7
Venom grand-1 27.3
Pit, infrared sensing 9.1
Nose 5.6
Brain-1 2.9
Eye 16.5
fetal fibroblast 10.3
venom gland-2 21.3
Brain-2 3.2
Spleen 9.7
Lung 5.7
Liver 29.0
Kidney 12.2
Pancreas 19.7
Small intestine 7.5
Large intestine 12.3
Stomach 13.2
heart 57.4
ovary 11.8
cheek muscle 155.3

Transcript
Transcript IDhabu1_s3505_g11926.t1
Definition-
>habu1_s3505_g11926.t1
ggatcaaatgagcctgtctgcctgacagggcagggaagctgagggacagagatcatacggtagtaaacggcagccatcat
ggcaagctgtaagaatactgatggcactgaaatatacaacgagattcacttttatgcccgactaaattccaaggattccc
acaataagcgttcaggcaggtccatcacactctttgcacgcaagtggaaggacaaagtgccatggccacgtctcaccaaa
gaagatttcaagccagcatggctctcagtggactttgataactggagagattgggaaggagatgaagaaatggaagcagc
catggttgaacaatatgcagagctcatgcaaaaagtcactaagaaagaaccaccgccagccatggatgatcttgatgatg
acagctgaaaggcacaacttcctgactggactggtacctaagtttactacagctacagtcaacacacagtgacatgggag
taggcatcacattggctaaggcctaggacaaggaagcagatgtgatgtgtcaaagtgtttcaaatttatttgttttcaat
cggtattaaattattgcaatgtaatttttctg
Transcript IDhabu1_s3505_g11926.t2
Definition-
>habu1_s3505_g11926.t2
ggatcaaatgagcctgtctgcctgacagggcagggaagctgagggacagagatcatacggtagtaaacggcagccatcat
ggcaagacaaccagccaaaactctatggtatgaccgtccacgatatgtatttctggaattctgcgtggaagacagcaggg
atgtaaaagtggaccttgatgattacaaggtaatattcagctgtaagaatactgatggcactgaaatatacaacgagatt
cacttttatgcccgactaaattccaaggattcccacaataagcgttcaggcaggtccatcacactctttgcacgcaagtg
gaaggacaaagtgccatggccacgtctcaccaaagaagatttcaagccagcatggctctcagtggactttgataactgga
gagattgggaaggagatgaagaaatggaagcagccatggttgaacaatatgcagagctcatgcaaaaagtcactaagaaa
gaaccaccgccagccatggatgatcttgatgatgacagctgaaaggcacaacttcctgactggactggtacctaagttta
ctacagctacagtcaacacacagtgacatgggagtaggcatcacattggctaaggcctaggacaaggaagcagatgtgat
gtgtcaaagtgtttcaaatttatttgttttcaatcggtattaaattattgcaatgtaatttttctg

Protein
Protein IDhabu1_s3505_g11926.t1
Definition-
>habu1_s3505_g11926.t1
MASCKNTDGTEIYNEIHFYARLNSKDSHNKRSGRSITLFARKWKDKVPWPRLTKEDFKPAWLSVDFDNWRDWEGDEEMEA
AMVEQYAELMQKVTKKEPPPAMDDLDDDS
Protein IDhabu1_s3505_g11926.t2
Definition-
>habu1_s3505_g11926.t2
MARQPAKTLWYDRPRYVFLEFCVEDSRDVKVDLDDYKVIFSCKNTDGTEIYNEIHFYARLNSKDSHNKRSGRSITLFARK
WKDKVPWPRLTKEDFKPAWLSVDFDNWRDWEGDEEMEAAMVEQYAELMQKVTKKEPPPAMDDLDDDS

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