Gene
| Gene Model ID | habu1_s3535_g11967 |
|---|---|
| Locus | habu1_scaffold3535 : 120616 ... 151868 : + |
| To GenomeBrowser | habu1_scaffold3535:120616..151868 |
| Genes list of scaffold | habu1_scaffold3535 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| troponin slow skeletal partial | GO:0005861 GO:0055010 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3535_g11967.t1 | 1 | 1 | Troponin | 6 | 137 | 0.0 | 173.8 | 0.0 | 0.0 | 173.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3535_g11967.t1 | gi|602628580|ref|XP_007421224.1| | PREDICTED: troponin I, slow skeletal muscle [Python bivittatus] | 0.0 |
| habu1_s3535_g11967.t1 | gi|637296616|ref|XP_008108086.1| | PREDICTED: troponin I, slow skeletal muscle isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s3535_g11967.t1 | gi|637296612|ref|XP_003220616.2| | PREDICTED: troponin I, slow skeletal muscle isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s3535_g11967.t1 | gi|363743002|ref|XP_419242.3| | PREDICTED: troponin I, slow skeletal muscle isoform X4 [Gallus gallus] | 0.0 |
| habu1_s3535_g11967.t1 | gi|514720631|ref|XP_005013791.1| | PREDICTED: troponin I, slow skeletal muscle [Anas platyrhynchos] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 4.7 |
| Pit, infrared sensing | 25.6 |
| Nose | 0.2 |
| Brain-1 | 0.7 |
| Eye | 37.4 |
| fetal fibroblast | 1.1 |
| venom gland-2 | 0.3 |
| Brain-2 | 0.6 |
| Spleen | 0.1 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.6 |
| Stomach | 0.3 |
| heart | 0.1 |
| ovary | 0.1 |
| cheek muscle | 35.2 |
Transcript
| Transcript ID | habu1_s3535_g11967.t1 |
|---|---|
| Definition | - |
>habu1_s3535_g11967.t1 ggcattaaaaaggttgagaaccactgctctagaagaacttctgtattctaacatttcatagaatggttagagtgctatgt tatagaatggttagagtgctatgttatagaatggttagagtgctatgttacagtgcttttgcacccagtgtttgggcttc tgagctctacttctgatatacctagtggacatctcaatccacattctaccttttcaatggttaacacattctgcactttt aatacattgttattgcaacttttgtaaagtaaggagaaatcagttccattggtttataagataagaaaggaaatgcgtca gcaaaagaagacaaagagaaagagtttgatgctggctaaagccaaagaagaatgggaacaagaacaagtggacaaacaag gagagaaggagagatatttggcagaaaggataacacctatgcatatcagtgggctttcctattcccaactccaggatcta tgccgggagcttcatgagaaagtagacattgtggatgaagagagatatgattttgaagcaaagtgtaaccataacacacg ggagattaaagacttgaaactgaaggtgcttgaccttaggggaaaattcaagcgtcctcccttgcgccgtgtccgggtat ctgcagatgccatgcttagagctctgcttggctcaaagcacaaagtatctatggacctgagagccaacctcaagtctgtc aagaaggaggacacagaaaaggaacgtccagtagaagtgggtgactggcgtaagaatgtggaagccatgtcaggaatgga aggcaggaagaagatgtttgatgctgccaaatcaccaacaggacaatgagaagtcatatttctttcatagaaacatgaag agcccttccatagagcctacgtgcatcactttttttttcttct |
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Protein
| Protein ID | habu1_s3535_g11967.t1 |
|---|---|
| Definition | - |
>habu1_s3535_g11967.t1 MRQQKKTKRKSLMLAKAKEEWEQEQVDKQGEKERYLAERITPMHISGLSYSQLQDLCRELHEKVDIVDEERYDFEAKCNH NTREIKDLKLKVLDLRGKFKRPPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMS GMEGRKKMFDAAKSPTGQ |
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