Gene
| Gene Model ID | habu1_s3535_g11968 |
|---|---|
| Locus | habu1_scaffold3535 : 167046 ... 191943 : + |
| To GenomeBrowser | habu1_scaffold3535:167046..191943 |
| Genes list of scaffold | habu1_scaffold3535 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3535_g11968.t2 | 2 | 1 | Caldesmon | 21 | 195 | 5.8e-12 | 44.7 | 9.5e-07 | 0.007 | 14.8 |
| habu1_s3535_g11968.t2 | 2 | 2 | Caldesmon | 297 | 420 | 5.8e-12 | 44.7 | 1.3e-12 | 9.5e-09 | 34.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 11.4 |
| Venom grand-1 | 3.4 |
| Pit, infrared sensing | 7.8 |
| Nose | 12.0 |
| Brain-1 | 0.2 |
| Eye | 4.6 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 1.1 |
| Brain-2 | 0.2 |
| Spleen | 3.2 |
| Lung | 9.0 |
| Liver | 19.7 |
| Kidney | 17.4 |
| Pancreas | 13.5 |
| Small intestine | 24.3 |
| Large intestine | 12.6 |
| Stomach | 10.0 |
| heart | 0.1 |
| ovary | 0.7 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s3535_g11968.t1 |
|---|---|
| Definition | - |
>habu1_s3535_g11968.t1 aggaagccaggaagcgagcgaactagccagccagcatctcttgcgaggggggcttccaagggcctcttgctgctactggg agcctagcagagttctccctgggggaaaaaaaacgctcaatcgataggcaagatcagcatccgccacggtccaagcccgg agagagaccgcaagcagcatgtcctttaaccgaaagaactggtccgcgctatccagcctggctcaacaatggtcgcttga ggatggagaggagcaggagagagagcgcagacgaaggcataggcaactgagttccacctctgagacaaagggggaggaat cctccagcacagtacagaatgtgaccagtcacacatcaaacagggttgataattccttagaggcaaagctgcttgatttg gaaaactcagcacttaaaaataagaagaccgaaccagttacaataaataaattggaaggcagaagagtgaggaggagagc agagtttttaaataatataaaacaagagaagaaaacactagtgagtactaagaaatttgaaaaggaagctgctgaagata accctacatctcctccagaatcatccaaagaagagggaaaagcagaaaaatgtgaaaccctaatttcgcaaaagcacgtt atagaagaaagccatcaaatccagagtcagaaaaaagaggagatagccccggagaaacatgaagccttgaagcatgagaa ggacctcaaaatagatgaggatcaggtctttagtgaggagcagaaggtcccgagtgtatgtgaatctcagagactggctg tgattcagaatgaggtggcttcccagcagcctcaaagagcttcttcggaacgtaaaagcatcagccgacttgaggtgaaa attcagccaagagctagaacgttcactgatccttccgctgcagccacacctgcttctgaggcaccacaggtcacagaaaa agctattcccaaatcaagtgctaaaactgtaaggtctccctctggtcaagaaggttttgatgctcctatactaatttctg aaccccggattacctatagtagttcattcaaccggatcagtccaaggacaatctcattccgggttcttcccaggaaagaa agacaagaagatatattaagcagaagtgccagtatgaggcttccagcaagcacagtcaaacttgaggagaagctagagag atatacatctgctgtccagagggcaggatccattaaagtgtcttcatctattcggagaaacttccaaccagcttcagagg gtgtggccagcaaacgtagcatctttgaagccactgttcctgtccagagtgagcctcccactcttgtccgtaaggaaagt ttgaggatcccaggaggggtctcatcccgaataaatctttggataagtcgaactcaggaatccagaaagaatgaaggagt caaggacattcagagaactgagaacaccatacaggggagttagtggggacactgatctgatggtttgtgaaggaaatcca agatgcaactagacaagctactctcaggaaaacttacctccattgaaacaaaaggcatggatctcttggaattcaactat atccctcagtttattgctctactcttctatagaactgaccatctggcaaagatatctatcagccaacatgcctacaatgc cctttattgaatggggctcttgatgacttaaatgatttgatgggtgggaaaattggcctatgacagaaaaactatatttc tataatccatttttatttctttttattgctatatcacccatcctatcatccaaaattaagttgagtcttaagttttatca gcaaatatgaaatacatatggcttcttaactggatcat |
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| Transcript ID | habu1_s3535_g11968.t2 |
| Definition | - |
>habu1_s3535_g11968.t2 aggaagccaggaagcgagcgaactagccagccagcatctcttgcgaggggggcttccaagggcctcttgctgctactggg agcctagcagagttctccctgggggaaaaaaaacgctcaatcgataggcaagatcagcatccgccacggtccaagcccgg agagagaccgcaagcagcatgtcctttaaccgaaagaactggtccgcgctatccagcctggctcaacaatggtcgcttga ggatggagaggagcaggagagagagcgcagacgaaggcataggcaactgagttccacctctgagacaaagggggaggaat cctccagcacagtacagaatgtgaccagtcacacatcaaacagggttgataattccttagaggcaaagctgcttgatttg gaaaactcagcacttaaaaataagaagaccgaaccagttacaataaataaattggaaggcagaagagtgaggaggagagc agagtttttaaataatataaaacaagagaagaaaacactagtgagtactaagaaatttgaaaaggaagctgctgaagata accctacatctcctccagaatcatccaaagaagagggaaaagcagaaaaatgtgaaaccctaatttcgcaaaagcacgtt atagaagaaagccatcaaatccagagtcagaaaaaagaggagatagccccggagaaacatgaagccttgaagcatgagaa ggacctcaaaatagatgaggatcaggtctttagtgaggagcagaaggtcccgagtgtatgtgaatctcagagactggctg tgattcagaatgaggtggcttcccagcagcctcaaagagcttcttcggaacgtaaaagcatcagccgacttgaggtgaaa attcagccaagagctagaacgttcactgatccttccgctgcagccacacctgcttctgaggcaccacaggtcacagaaaa agctattcccaaatcaagtgctaaaactgtaaggtctccctctggtcaagaaggttttgatgctcctatactaatttctg aaccccggattacctatagtagttcattcaaccggatcagtccaaggacaatctcattccgggttcttcccaggaaagaa agacaagaagatatattaagcagaagtgccagtatgaggcttccagcaagcacagtcaaacttgaggagaagctagagag atatacatctgctgtccagagggcaggatccattaaagtgtcttcatctattcggagaaacttccaaccagcttcagagg gtgtggccagcaaacgtagcatctttgaagccactgttcctgtccagagtgagcctcccactcttgtccgtaaggaaagt ttgaggatcccaggaggggtctcatcccgaataaatctttggataagtcgaactcaggaatccagaaagaatgaaggagt caaggtatgagaaaagctttggacattcagagaactgagaacaccatacaggggagttagtggggacactgatctgatgg tttgtgaaggaaatccaagatgcaactagacaagctactctcaggaaaacttacctccattgaaacaaaaggcatggatc tcttggaattcaactatatccctcagtttattgctctactcttctatagaactgaccatctggcaaagatatctatcagc caacatgcctacaatgccctttattgaatggggctcttgatgacttaaatgatttgatgggtgggaaaattggcctatga cagaaaaactatatttctataatccatttttatttctttttattgctatatcacccatcctatcatccaaaattaagttg agtcttaagttttatcagcaaatatgaaatacatatggcttcttaactggatcat |
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Protein
| Protein ID | habu1_s3535_g11968.t1 |
|---|---|
| Definition | - |
>habu1_s3535_g11968.t1 MSFNRKNWSALSSLAQQWSLEDGEEQERERRRRHRQLSSTSETKGEESSSTVQNVTSHTSNRVDNSLEAKLLDLENSALK NKKTEPVTINKLEGRRVRRRAEFLNNIKQEKKTLVSTKKFEKEAAEDNPTSPPESSKEEGKAEKCETLISQKHVIEESHQ IQSQKKEEIAPEKHEALKHEKDLKIDEDQVFSEEQKVPSVCESQRLAVIQNEVASQQPQRASSERKSISRLEVKIQPRAR TFTDPSAAATPASEAPQVTEKAIPKSSAKTVRSPSGQEGFDAPILISEPRITYSSSFNRISPRTISFRVLPRKERQEDIL SRSASMRLPASTVKLEEKLERYTSAVQRAGSIKVSSSIRRNFQPASEGVASKRSIFEATVPVQSEPPTLVRKESLRIPGG VSSRINLWISRTQESRKNEGVKDIQRTENTIQGS |
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| Protein ID | habu1_s3535_g11968.t2 |
| Definition | - |
>habu1_s3535_g11968.t2 MSFNRKNWSALSSLAQQWSLEDGEEQERERRRRHRQLSSTSETKGEESSSTVQNVTSHTSNRVDNSLEAKLLDLENSALK NKKTEPVTINKLEGRRVRRRAEFLNNIKQEKKTLVSTKKFEKEAAEDNPTSPPESSKEEGKAEKCETLISQKHVIEESHQ IQSQKKEEIAPEKHEALKHEKDLKIDEDQVFSEEQKVPSVCESQRLAVIQNEVASQQPQRASSERKSISRLEVKIQPRAR TFTDPSAAATPASEAPQVTEKAIPKSSAKTVRSPSGQEGFDAPILISEPRITYSSSFNRISPRTISFRVLPRKERQEDIL SRSASMRLPASTVKLEEKLERYTSAVQRAGSIKVSSSIRRNFQPASEGVASKRSIFEATVPVQSEPPTLVRKESLRIPGG VSSRINLWISRTQESRKNEGVKV |
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