Gene
| Gene Model ID | habu1_s3537_g11984 |
|---|---|
| Locus | habu1_scaffold3537 : 101006 ... 137336 : + |
| To GenomeBrowser | habu1_scaffold3537:101006..137336 |
| Genes list of scaffold | habu1_scaffold3537 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cold shock domain-containing protein e1 isoform x2 | GO:0003677 GO:0005743 GO:0005794 GO:0005886 GO:0006355 GO:0044822 GO:0070937 GO:0070966 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3537_g11984.t3 | 5 | 1 | CSD | 27 | 89 | 0.0 | 272.0 | 2.8e-17 | 3.8e-14 | 52.2 |
| habu1_s3537_g11984.t3 | 5 | 2 | CSD | 186 | 247 | 0.0 | 272.0 | 1.4e-19 | 1.9e-16 | 59.6 |
| habu1_s3537_g11984.t3 | 5 | 3 | CSD | 351 | 411 | 0.0 | 272.0 | 5.4e-12 | 7.3e-09 | 35.2 |
| habu1_s3537_g11984.t3 | 5 | 4 | CSD | 519 | 579 | 0.0 | 272.0 | 3.5e-17 | 4.7e-14 | 51.9 |
| habu1_s3537_g11984.t3 | 5 | 5 | CSD | 673 | 735 | 0.0 | 272.0 | 2.9e-18 | 3.9e-15 | 55.3 |
| habu1_s3537_g11984.t3 | 1 | 1 | SUZ-C | 754 | 786 | 1.1e-13 | 50.4 | 1.8e-16 | 2.4e-13 | 49.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3537_g11984.t3 | gi|602658052|ref|XP_007434735.1| | PREDICTED: cold shock domain-containing protein E1 isoform X5 [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 82.7 |
| Venom grand-1 | 155.7 |
| Pit, infrared sensing | 92.7 |
| Nose | 62.6 |
| Brain-1 | 47.1 |
| Eye | 82.6 |
| fetal fibroblast | 287.0 |
| venom gland-2 | 133.5 |
| Brain-2 | 50.3 |
| Spleen | 86.0 |
| Lung | 128.8 |
| Liver | 201.4 |
| Kidney | 163.1 |
| Pancreas | 110.5 |
| Small intestine | 110.4 |
| Large intestine | 107.7 |
| Stomach | 177.6 |
| heart | 186.1 |
| ovary | 150.2 |
| cheek muscle | 1044.8 |
Transcript
| Transcript ID | habu1_s3537_g11984.t1 |
|---|---|
| Definition | - |
>habu1_s3537_g11984.t1 tgagctgttgggtatgaagtgtaacagaatagaatttaccacctgaaactgctgcttcaagttcagatcaggaaaggaac acattacatcgtaacaacaaaacaagaccaaagaagagtaaactttacactgaagacacaacacttgatctgaaacaaga agtttgtgcctactcaacagcttcaaaagagcacgtcccaacgctgctagtagtctttgttttcttcagtactgtgctga aattgcccagggcagcaccagttattctttattagcttgatagatcacttgtctcttgctatttctttttttttttttta acaatagcaatcttcaaactttgaaacgtgtgctgaaacgaagaatcggcaaatactactgaaagtgcaatattagaata tcactgcgagcattataaaattaagttgaaacaggcgtaaaaatatggcaagcacctggaaagaatttgttgaattttcc atgccgtcttctccccctactgcatacgttagtgccaacctgggcaatgcatctccagtcggactgaatttatcacctta tggccaatcactgtatgagatggagaaccattatactgtgtcatcagatcctctcccccctcctgcagctccccctcctt ctcatcctttacctttttcttcatcttctacttcatccgggtctaaaaaaccgaagaggacccccctttatcagagatct atgagctttgatccaaaccttctccataacaatggacacaacgggtaccccaatggtacttctgcaggattgcgcgaaac tggggttattgaaaaactgctggcctcctatggattcattcagtgttcagaacggcaagctagactgttcttccacagtt cacagtataatggcaatctacaggagcttaaagtaggagatgatgttgaatttgaagtatcttctgaccggcgaactgga aaaccgattgcaattaaactggtgaagataaaaacagagaccttacctgaagaacgaataaatggacaagaagtcttcta cttaacctacaccccagaagatgttgaaggaaatgttcaattggaaactggagacaaaataaactttattattgatacaa ataaacatactggtgctgtaagtgctcggaatattatgcttttgaaaaagaaacaagctcgatgtcaaggagtagtttgt gccatgaaggaagcctttggattcattgagagaggtgatgttgtaaaggagatattctttcactatagtgaatttaaagg tgacctagaagccttacagcctggtgatgatgtggagttcacaatcaaagacagaaatggtaaagaagttgcaactgaag taaggcttttgcctcaaggaactgttatttttgaagatattagcattgaacactttgagggaactgtaacaaaagtaatt ccaaaagtacccaacaaaaatcagaatgacccattacctggacgcataaaagttgattttgtgattcctaaagaacttcc atttggggacaaagatacaaaatcaaaggtgacacttttggaaggtgaccacgttagattcaacatttcaacagatcggc gtgacaaattggaacgagccactaatattgaagttcttcccaatacttttcaagtcactaatgaggctagagaaatgggt gtgattgctgcaatgagggatggctttggtttcattaaatgtgttgatagagatgcccgcatgttctttcacttcagtga aattttagatggtaaccagctccacatttcagatgaagtggaatttactgttgttcctgatatgctgtctgctcaaagaa atcatgctataaggattaaaaaactacctaagggcacagtttcattccacacccaatcagatcatcgttttattggcact atagaaaaagaagccacttctgtcaaatccactagtcccaataaaggcaaagaaaaggaagctgaagagggaataattgc ttatgatgattgtggagaaaaattgactattccctatcaggctaaagatgtggaaggatctacttctcctcagataggag ataaggttgaatttacagtctgtgaagtaaaaagaactgggttgcaaacagctacttctgttcgactgcttggtagaaac tatagttcaaaaagacttttgggatatgttgcaactctcaaggataactttgggtttattgaaacagccaatcacgataa ggagatcttcttccattacagtgaattctgtggtgatatcgatagcttggaacttggagacatggttgaatacagcttat caaaaggcaaaggaaacaaagtcagtgcagagaaagtgaacaagacacatgcagtaaatggcatcacagatgaagctgac ccaacttgttacacgggtaaagtaattcgctctctcaggagtgtagatccttcccaaacggaataccaaggaatgattga agtcatggaggatggagaaatgaaaggtgaggtctatccttttggaattgttggcatggcaaataaaggggactgtctgc agaaaggagagaccgtgaaattccagctttgtatcttcggtcagaatgggcaaacaatggcttgcaacataacagctttc cgtagagctactgtagaatgtgtgaaagatcagtttggtttcataaactatgaagtgggtgacagcaaaaaactcttttt tcatgtgaaagaagttcaggatggagtggaattgcaggctggtgatgaagtagagttttcagtcattctcaatcaacgca cagggaaatgcagtgcctgtaatgtgtggcgtgttagtgaaggtgctaaggttgtagctgctccacgccctgacagactt gttaatcgtttaaagagcattaatttggatgatgccagtgctcctcgtctaactgtgcttcgtcagccaaggggaccgga taatacaaagggatttggtacagagagaaagattcgtcaagctggtgttatcgattaactggtctcaaagcaactaatat tggaatatgggtggggtctggtgaagggtattgaatagccttgtattcatcccttccaaaatctaaggagctattacacc agttttaacaccttcctcatgttatgtttaaaaataaatttatgaaacagttttaaaata |
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| Transcript ID | habu1_s3537_g11984.t2 |
| Definition | - |
>habu1_s3537_g11984.t2 tgagctgttgggtatgaagtgtaacagaatagaatttaccacctgaaactgctgcttcaagttcagatcaggaaaggaac acattacatcgtaacaacaaaacaagaccaaagaagagtaaactttacactgaagacacaacacttgatctgaaacaaga agtttgtgcctactcaacagcttcaaaagagcacgtcccaacgctgctagtagtctttgttttcttcagtactgtgctga aattgcccagggcagcaccagttattctttattagcttgatagatcacttgtctcttgctatttctttttttttttttta acaatagcaatcttcaaactttgaaacgtgtgctgaaacgaagaatcggcaaatactactgaaagtgcaatattagaata tcactgcgagcattataaaattaagttgaaacaggcgtaaaaatatggcaagcacctggaaagaatttgttgaattttcc atgccgtcttctccccctactgcatacgttagtgccaacctgggcaatgcatctccagtcggactgaatttatcacctta tggccaatcactgtatgagatggagaaccattatactgtgtcatcagatcctctcccccctcctgcagctccccctcctt ctcatcctttacctttttcttcatcttctacttcatccgggtctaaaaaaccgaagaggacccccctttatcagagatct atgagctttgatccaaaccttctccataacaatggacacaacgggtaccccaatggtacttctgcaggattgcgcgaaac tggggttattgaaaaactgctggcctcctatggattcattcagtgttcagaacggcaagctagactgttcttccacagtt cacagtataatggcaatctacaggagcttaaagtaggagatgatgttgaatttgaagtatcttctgaccggcgaactgga aaaccgattgcaattaaactggtgaagataaaaacagagaccttacctgaagaacgaataaatggacaagttgtgtgtgc tgttcctcacaacttagagagtaaatctccagctgccccgggtcagagtccaacagggagtgtatgctacgaacgtaatg gggaagtcttctacttaacctacaccccagaagatgttgaaggaaatgttcaattggaaactggagacaaaataaacttt attattgatacaaataaacatactggtgctgtaagtgctcggaatattatgcttttgaaaaagaaacaagctcgatgtca aggagtagtttgtgccatgaaggaagcctttggattcattgagagaggtgatgttgtaaaggagatattctttcactata gtgaatttaaaggtgacctagaagccttacagcctggtgatgatgtggagttcacaatcaaagacagaaatggtaaagaa gttgcaactgaagtaaggcttttgcctcaaggaactgttatttttgaagatattagcattgaacactttgagggaactgt aacaaaagtaattccaaaagtacccaacaaaaatcagaatgacccattacctggacgcataaaagttgattttgtgattc ctaaagaacttccatttggggacaaagatacaaaatcaaaggtgacacttttggaaggtgaccacgttagattcaacatt tcaacagatcggcgtgacaaattggaacgagccactaatattgaagttcttcccaatacttttcaagtcactaatgaggc tagagaaatgggtgtgattgctgcaatgagggatggctttggtttcattaaatgtgttgatagagatgcccgcatgttct ttcacttcagtgaaattttagatggtaaccagctccacatttcagatgaagtggaatttactgttgttcctgatatgctg tctgctcaaagaaatcatgctataaggattaaaaaactacctaagggcacagtttcattccacacccaatcagatcatcg ttttattggcactatagaaaaagaagccacttctgtcaaatccactagtcccaataaaggcaaagaaaaggaagctgaag agggaataattgcttatgatgattgtggagaaaaattgactattccctatcaggctaaagatgtggaaggatctacttct cctcagataggagataaggttgaatttacagtctgtgaagtaaaaagaactgggttgcaaacagctacttctgttcgact gcttggtagaaactatagttcaaaaagacttttgggatatgttgcaactctcaaggataactttgggtttattgaaacag ccaatcacgataaggagatcttcttccattacagtgaattctgtggtgatatcgatagcttggaacttggagacatggtt gaatacagcttatcaaaaggcaaaggaaacaaagtcagtgcagagaaagtgaacaagacacatgcagtaaatggcatcac agatgaagctgacccaacttgttacacgggtaaagtaattcgctctctcaggagtgtagatccttcccaaacggaatacc aaggaatgattgaagtcatggaggatggagaaatgaaaggtgaggtctatccttttggaattgttggcatggcaaataaa ggggactgtctgcagaaaggagagaccgtgaaattccagctttgtatcttcggtcagaatgggcaaacaatggcttgcaa cataacagctttccgtagagctactgtagaatgtgtgaaagatcagtttggtttcataaactatgaagtgggtgacagca aaaaactcttttttcatgtgaaagaagttcaggatggagtggaattgcaggctggtgatgaagtagagttttcagtcatt ctcaatcaacgcacagggaaatgcagtgcctgtaatgtgtggcgtgttagtgaaggtgctaaggttgtagctgctccacg ccctgacagacttgttaatcgtttaaagagcattaatttggatgatgccagtgctcctcgtctaactgtgcttcgtcagc caaggggaccggataatacaaagggatttggtacagagagaaagattcgtcaagctggtgttatcgattaactggtctca aagcaactaatattggaatatgggtggggtctggtgaagggtattgaatagccttgtattcatcccttccaaaatctaag gagctattacaccagttttaacaccttcctcatgttatgtttaaaaataaatttatgaaacagttttaaaata |
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| Transcript ID | habu1_s3537_g11984.t3 |
| Definition | - |
>habu1_s3537_g11984.t3 tgagctgttgggtatgaagtgtaacagaatagaatttaccacctgaaactgctgcttcaagttcagatcaggaaaggaac acattacatcgtaacaacaaaacaagaccaaagaagagtaaactttacactgaagacacaacacttgatctgaaacaaga agtttgtgcctactcaacagcttcaaaagagcacgtcccaacgctgctagtagtctttgttttcttcagtactgtgctga aattgcccagggcagcaccagttattctttattagcttgatagatcacttgtctcttgctatttctttttttttttttta acaatagcaatcttcaaactttgaaacgtgtgctgaaacgaagaatcggcaaatactactgaaagtgcaatattagaata tcactgcgagatgagctttgatccaaaccttctccataacaatggacacaacgggtaccccaatggtacttctgcaggat tgcgcgaaactggggttattgaaaaactgctggcctcctatggattcattcagtgttcagaacggcaagctagactgttc ttccacagttcacagtataatggcaatctacaggagcttaaagtaggagatgatgttgaatttgaagtatcttctgaccg gcgaactggaaaaccgattgcaattaaactggtgaagataaaaacagagaccttacctgaagaacgaataaatggacaag ttgtgtgtgctgttcctcacaacttagagagtaaatctccagctgccccgggtcagagtccaacagggagtgtatgctac gaacgtaatggggaagtcttctacttaacctacaccccagaagatgttgaaggaaatgttcaattggaaactggagacaa aataaactttattattgatacaaataaacatactggtgctgtaagtgctcggaatattatgcttttgaaaaagaaacaag ctcgatgtcaaggagtagtttgtgccatgaaggaagcctttggattcattgagagaggtgatgttgtaaaggagatattc tttcactatagtgaatttaaaggtgacctagaagccttacagcctggtgatgatgtggagttcacaatcaaagacagaaa tggtaaagaagttgcaactgaagtaaggcttttgcctcaaggaactgttatttttgaagatattagcattgaacactttg agggaactgtaacaaaagtaattccaaaagtacccaacaaaaatcagaatgacccattacctggacgcataaaagttgat tttgtgattcctaaagaacttccatttggggacaaagatacaaaatcaaaggtgacacttttggaaggtgaccacgttag attcaacatttcaacagatcggcgtgacaaattggaacgagccactaatattgaagttcttcccaatacttttcaagtca ctaatgaggctagagaaatgggtgtgattgctgcaatgagggatggctttggtttcattaaatgtgttgatagagatgcc cgcatgttctttcacttcagtgaaattttagatggtaaccagctccacatttcagatgaagtggaatttactgttgttcc tgatatgctgtctgctcaaagaaatcatgctataaggattaaaaaactacctaagggcacagtttcattccacacccaat cagatcatcgttttattggcactatagaaaaagaagccacttctgtcaaatccactagtcccaataaaggcaaagaaaag gaagctgaagagggaataattgcttatgatgattgtggagaaaaattgactattccctatcaggctaaagatgtggaagg atctacttctcctcagataggagataaggttgaatttacagtctgtgaagtaaaaagaactgggttgcaaacagctactt ctgttcgactgcttggtagaaactatagttcaaaaagacttttgggatatgttgcaactctcaaggataactttgggttt attgaaacagccaatcacgataaggagatcttcttccattacagtgaattctgtggtgatatcgatagcttggaacttgg agacatggttgaatacagcttatcaaaaggcaaaggaaacaaagtcagtgcagagaaagtgaacaagacacatgcagtaa atggcatcacagatgaagctgacccaacttgttacacgggtaaagtaattcgctctctcaggagtgtagatccttcccaa acggaataccaaggaatgattgaagtcatggaggatggagaaatgaaaggtgaggtctatccttttggaattgttggcat ggcaaataaaggggactgtctgcagaaaggagagaccgtgaaattccagctttgtatcttcggtcagaatgggcaaacaa tggcttgcaacataacagctttccgtagagctactgtagaatgtgtgaaagatcagtttggtttcataaactatgaagtg ggtgacagcaaaaaactcttttttcatgtgaaagaagttcaggatggagtggaattgcaggctggtgatgaagtagagtt ttcagtcattctcaatcaacgcacagggaaatgcagtgcctgtaatgtgtggcgtgttagtgaaggtgctaaggttgtag ctgctccacgccctgacagacttgttaatcgtttaaagagcattaatttggatgatgccagtgctcctcgtctaactgtg cttcgtcagccaaggggaccggataatacaaagggatttggtacagagagaaagattcgtcaagctggtgttatcgatta actggtctcaaagcaactaatattggaatatgggtggggtctggtgaagggtattgaatagccttgtattcatcccttcc aaaatctaaggagctattacaccagttttaacaccttcctcatgttatgtttaaaaataaatttatgaaacagttttaaa ata |
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Protein
| Protein ID | habu1_s3537_g11984.t1 |
|---|---|
| Definition | - |
>habu1_s3537_g11984.t1 MASTWKEFVEFSMPSSPPTAYVSANLGNASPVGLNLSPYGQSLYEMENHYTVSSDPLPPPAAPPPSHPLPFSSSSTSSGS KKPKRTPLYQRSMSFDPNLLHNNGHNGYPNGTSAGLRETGVIEKLLASYGFIQCSERQARLFFHSSQYNGNLQELKVGDD VEFEVSSDRRTGKPIAIKLVKIKTETLPEERINGQEVFYLTYTPEDVEGNVQLETGDKINFIIDTNKHTGAVSARNIMLL KKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATEVRLLPQGTVIFEDIS IEHFEGTVTKVIPKVPNKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLPN TFQVTNEAREMGVIAAMRDGFGFIKCVDRDARMFFHFSEILDGNQLHISDEVEFTVVPDMLSAQRNHAIRIKKLPKGTVS FHTQSDHRFIGTIEKEATSVKSTSPNKGKEKEAEEGIIAYDDCGEKLTIPYQAKDVEGSTSPQIGDKVEFTVCEVKRTGL QTATSVRLLGRNYSSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFCGDIDSLELGDMVEYSLSKGKGNKVSAEKVNK THAVNGITDEADPTCYTGKVIRSLRSVDPSQTEYQGMIEVMEDGEMKGEVYPFGIVGMANKGDCLQKGETVKFQLCIFGQ NGQTMACNITAFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVSEG AKVVAAPRPDRLVNRLKSINLDDASAPRLTVLRQPRGPDNTKGFGTERKIRQAGVID |
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| Protein ID | habu1_s3537_g11984.t2 |
| Definition | - |
>habu1_s3537_g11984.t2 MASTWKEFVEFSMPSSPPTAYVSANLGNASPVGLNLSPYGQSLYEMENHYTVSSDPLPPPAAPPPSHPLPFSSSSTSSGS KKPKRTPLYQRSMSFDPNLLHNNGHNGYPNGTSAGLRETGVIEKLLASYGFIQCSERQARLFFHSSQYNGNLQELKVGDD VEFEVSSDRRTGKPIAIKLVKIKTETLPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEG NVQLETGDKINFIIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDD VEFTIKDRNGKEVATEVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPNKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKV TLLEGDHVRFNISTDRRDKLERATNIEVLPNTFQVTNEAREMGVIAAMRDGFGFIKCVDRDARMFFHFSEILDGNQLHIS DEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHTQSDHRFIGTIEKEATSVKSTSPNKGKEKEAEEGIIAYDDCGEKLTI PYQAKDVEGSTSPQIGDKVEFTVCEVKRTGLQTATSVRLLGRNYSSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFC GDIDSLELGDMVEYSLSKGKGNKVSAEKVNKTHAVNGITDEADPTCYTGKVIRSLRSVDPSQTEYQGMIEVMEDGEMKGE VYPFGIVGMANKGDCLQKGETVKFQLCIFGQNGQTMACNITAFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVE LQAGDEVEFSVILNQRTGKCSACNVWRVSEGAKVVAAPRPDRLVNRLKSINLDDASAPRLTVLRQPRGPDNTKGFGTERK IRQAGVID |
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| Protein ID | habu1_s3537_g11984.t3 |
| Definition | - |
>habu1_s3537_g11984.t3 MSFDPNLLHNNGHNGYPNGTSAGLRETGVIEKLLASYGFIQCSERQARLFFHSSQYNGNLQELKVGDDVEFEVSSDRRTG KPIAIKLVKIKTETLPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINF IIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKE VATEVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPNKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNI STDRRDKLERATNIEVLPNTFQVTNEAREMGVIAAMRDGFGFIKCVDRDARMFFHFSEILDGNQLHISDEVEFTVVPDML SAQRNHAIRIKKLPKGTVSFHTQSDHRFIGTIEKEATSVKSTSPNKGKEKEAEEGIIAYDDCGEKLTIPYQAKDVEGSTS PQIGDKVEFTVCEVKRTGLQTATSVRLLGRNYSSKRLLGYVATLKDNFGFIETANHDKEIFFHYSEFCGDIDSLELGDMV EYSLSKGKGNKVSAEKVNKTHAVNGITDEADPTCYTGKVIRSLRSVDPSQTEYQGMIEVMEDGEMKGEVYPFGIVGMANK GDCLQKGETVKFQLCIFGQNGQTMACNITAFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVI LNQRTGKCSACNVWRVSEGAKVVAAPRPDRLVNRLKSINLDDASAPRLTVLRQPRGPDNTKGFGTERKIRQAGVID |
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