Gene
| Gene Model ID | habu1_s3537_g11985 |
|---|---|
| Locus | habu1_scaffold3537 : 142326 ... 149034 : + |
| To GenomeBrowser | habu1_scaffold3537:142326..149034 |
| Genes list of scaffold | habu1_scaffold3537 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gtpase nras | GO:0000139 GO:0005525 GO:0005886 GO:0008284 GO:0008542 GO:0030036 GO:0032228 GO:0032403 GO:0035022 GO:0043524 GO:0045596 GO:0048169 GO:0048642 GO:0051146 GO:0060441 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3537_g11985.t1 | 1 | 1 | Arf | 3 | 162 | 4.9e-09 | 35.6 | 6.4e-12 | 6.0e-09 | 35.3 |
| habu1_s3537_g11985.t1 | 1 | 1 | Ras | 5 | 164 | 0.0 | 193.2 | 0.0 | 0.0 | 193.0 |
| habu1_s3537_g11985.t1 | 1 | 1 | Miro | 5 | 119 | 8.9e-20 | 71.3 | 1.3e-22 | 1.2e-19 | 70.9 |
| habu1_s3537_g11985.t1 | 1 | 1 | GTP_EFTU | 47 | 163 | 3.0e-08 | 33.3 | 1.7e-10 | 1.5e-07 | 31.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3537_g11985.t1 | gi|602647011|ref|XP_007429935.1| | PREDICTED: GTPase NRas isoform X1 [Python bivittatus] | 0.0 |
| habu1_s3537_g11985.t1 | gi|327271509|ref|XP_003220530.1| | PREDICTED: GTPase NRas [Anolis carolinensis] | 0.0 |
| habu1_s3537_g11985.t1 | gi|60302748|ref|NP_001012567.1| | GTPase NRas precursor [Gallus gallus] | 0.0 |
| habu1_s3537_g11985.t1 | gi|449490086|ref|XP_002194371.2| | PREDICTED: GTPase NRas [Taeniopygia guttata] | 0.0 |
| habu1_s3537_g11985.t1 | gi|530606572|ref|XP_005294984.1| | PREDICTED: GTPase NRas [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.9 |
| Venom grand-1 | 2.0 |
| Pit, infrared sensing | 5.0 |
| Nose | 4.8 |
| Brain-1 | 2.5 |
| Eye | 2.6 |
| fetal fibroblast | 27.3 |
| venom gland-2 | 6.8 |
| Brain-2 | 2.6 |
| Spleen | 3.0 |
| Lung | 3.3 |
| Liver | 2.1 |
| Kidney | 3.0 |
| Pancreas | 1.9 |
| Small intestine | 2.6 |
| Large intestine | 2.3 |
| Stomach | 2.6 |
| heart | 0.9 |
| ovary | 59.6 |
| cheek muscle | 1.7 |
Transcript
| Transcript ID | habu1_s3537_g11985.t1 |
|---|---|
| Definition | - |
>habu1_s3537_g11985.t1 aagcctggaagtgaagtaagaggaggttcatacttaacttgctagccgttgggtacggagggtgggtggggggggtctcc ttgaagtcctttctctccaagtctggggtgggaggaggcgtggaaacggcgtaccccggtcaggagagacagcggtctct cgtcggtccccacccgctgttgagaggcgctgccttggaagggccctaaggaaggcaatgactgagtacaaattggtggt agtaggagctgggggtgttggaaaaagtgccctgaccatccaacttatccagaatcactttgtagatgaatatgatccta ctattgaggattcttaccgtaaacaagttgttattgatggagagacttgtttgctagacatcctggatacggcaggacag gaggaatatagtgccatgagggaccaatatatgagaactggggaaggctttctttgtgtgttcgccattaacaacagcaa atcatttgcagatataaatctttacagagagcaaattaaaagagtgaaagattcagaagatgtaccaatggtattagtgg gaaacaaatgtgatttaccaacacgaacagtagacaccaagcaggctcacgaagtagcaaagagctatggcattccattc attgaaacatctgccaaaacaagacagggtgttgaagatgctttttatacattggttagagaaatccgtcagtatcgaat gaaaaggctcaacagtaatgaagatggaaatcaaggctgcatgggggtgtcgtgtcttgtgatgtgatgagctgcctttg aatcatccatccaagttcaaagctgaatcttaattccactgtgttgcatttcatgacgatgacttggccagtatcatgca agttgccaactgatcaatactaaaacattctgtcagcaccagaagatactgtttctgaacatctacctctttgctcagtt gagcatgcaaagaaaatctcatacgttatgtgtgggatttttcacttttctttcttgggtaggttcaaactgattatatg ggaactatagaggccaaatgccttgaaaaaaattacatctcattttctggaaagaaggctggagtgaattatgatcttgc tattccaaaaaagccattacacagcattgtatggtaacattatgcttgatttcctgtacaccgttttaaaccaggataat atttgtcacatttcctatactatgtaaaaaattcctattgtgcattagattaatcacacctagtctaacatctttaattc tggccccttttttataacaaaagtaaaattatttgattatcaagtgcct |
|
Protein
| Protein ID | habu1_s3537_g11985.t1 |
|---|---|
| Definition | - |
>habu1_s3537_g11985.t1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC VFAINNSKSFADINLYREQIKRVKDSEDVPMVLVGNKCDLPTRTVDTKQAHEVAKSYGIPFIETSAKTRQGVEDAFYTLV REIRQYRMKRLNSNEDGNQGCMGVSCLVM |
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