Gene
| Gene Model ID | habu1_s3537_g11987 |
|---|---|
| Locus | habu1_scaffold3537 : 192436 ... 247943 : + |
| To GenomeBrowser | habu1_scaffold3537:192436..247943 |
| Genes list of scaffold | habu1_scaffold3537 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| denn domain-containing protein 2c isoform x1 | GO:0006397 GO:0017112 GO:0043087 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3537_g11987.t1 | 1 | 1 | uDENN | 557 | 627 | 3.4e-22 | 78.1 | 1.6e-25 | 7.9e-22 | 77.0 |
| habu1_s3537_g11987.t1 | 1 | 1 | DENN | 635 | 817 | 0.0 | 200.7 | 0.0 | 0.0 | 200.7 |
| habu1_s3537_g11987.t1 | 1 | 1 | dDENN | 863 | 930 | 1.3e-21 | 76.4 | 6.8e-25 | 3.4e-21 | 75.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3537_g11987.t1 | gi|602647003|ref|XP_007429931.1| | PREDICTED: DENN domain-containing protein 2C isoform X1 [Python bivittatus] | 0.0 |
| habu1_s3537_g11987.t1 | gi|637297490|ref|XP_003220549.2| | PREDICTED: DENN domain-containing protein 2C [Anolis carolinensis] | 0.0 |
| habu1_s3537_g11987.t1 | gi|591369666|ref|XP_007059664.1| | PREDICTED: DENN domain-containing protein 2C isoform X1 [Chelonia mydas] | 0.0 |
| habu1_s3537_g11987.t1 | gi|558142719|ref|XP_006118856.1| | PREDICTED: DENN domain-containing protein 2C isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s3537_g11987.t1 | gi|530606558|ref|XP_005294977.1| | PREDICTED: DENN domain-containing protein 2C isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.1 |
| Venom grand-1 | 1.8 |
| Pit, infrared sensing | 3.1 |
| Nose | 2.2 |
| Brain-1 | 1.6 |
| Eye | 1.5 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 1.4 |
| Brain-2 | 1.6 |
| Spleen | 1.1 |
| Lung | 2.0 |
| Liver | 1.5 |
| Kidney | 1.3 |
| Pancreas | 0.5 |
| Small intestine | 0.4 |
| Large intestine | 0.8 |
| Stomach | 0.7 |
| heart | 1.3 |
| ovary | 0.6 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s3537_g11987.t1 |
|---|---|
| Definition | - |
>habu1_s3537_g11987.t1 actgggggggtggaagggggagcagagacgagggggcggagttgtatattagggaagggcagggcttggcgtcggagcga cggaggcactagccaatagggccctgcccaaatgtgtcaacttcggaaagcggctctcctaggttcttgcgaagttgcca gtggcggcgacggcggcggcggcagaagccagaaagggatctcagtgggagtacgggagcgatggaagccgtataacatc aggatactttctttctgcaaaaggagtgtagataccagtttttcccgtacggctgtgcaaacactgtcccgtagccactg ccggaatataaagcaaaagatttctcagtgggagggtcggacaaaagggatctgccaagaagaaaggcagaaactgaagg attttggggtcaaatatggcctcgacaacaagaaaaagccatcagcacctgtgcctcacaagagtatagacggattagta aatgttcagcatttaggtttagatttctgggaaaactctaatctcggctctgtgactgaggaggaagaggaggaggagga acaccgcttccaagagatttccagaaaccatttagaggagcagctttctagtgacactttatctgaaacagcagatgcta cagaatggtcacgggagaggctgcctcctgggaatttctacacctcacgggacctatggaaacagataaaaacccttcct tttgatcaagaagcttctgttgcactggacttaaaaaggaaacgggaaagctgtggctcaacagagaaggagctgaacgt agctccagcaaagaaccaggagacaatatattgtgatgtggaaagtcaggaaaggcagccagccatcaacccagtgccca aaccacagaggactttccgttaccattctgagaaggaccagggaaacttcgctaacaattaccacaacaataagaagcca ttggaacagctgtgtaatgggagctatcctgcaactgcttcctatgagtctgaccacagaacaggcagcagaggaatccg aggcaggtctaagagaaagtcctttgagtttgaggacatccaaagttatcgaaacagactagcagccatcgagtatcaaa agcttcatgaagaactaaatggcaccacacgtgtctgtctctattgcacgcagtcagaggacaacctctatgaggatatt attgatcctgctaaagagaatccctatgaggacattaaagtgaagcctttgtggaggatcccatctaattggaagctgcc tcctccccgaaataccttcaagccacccaagcttctccacaagccacacttctttcaccgtaaaaccttggagctgaaga acacacggatctgtttgcgtgggaagttgccgaaagattcaacactacctgttacgttgaccgaatggaagttcttcaaa gcaggagaggctgaaagcaagaagagaaaaaatcttccccggcttgtattaaagatacaagagatctttgattccagacg aggaaagaaacgtgtgaagttggtggtgcaaactggaaaagagctttctccagccaaaggtgaaaccagtggatatgaca gtgaaccagagaatctgccgaaaagtcgccataagcgccttctgcaggtccaggctcagtccaaacggaacccacactat cagaccttggagcgagatctcattgaattccaggagcagcagctttttgagctgtttgtggtggtatctctgcagaagaa gtcatcagaggcaacgtataccccacaggttatacaacagtttccatgtaagtctgaccatccttttcgtcaatctaagg acactgaagaccgactaaaggttattcccaaattttgtttccctgatcccaaagactggtgtccaacctcagagacaaag agtgaaaccttttcctttgtgctaactggtgaggacggcagccgctggtttggatattgcaagaggctcttgccagaagg gaaaggaaagcggctacctgaggtctactgtatggttagccgcctaggctgtttcaaccttttttctaagatattagatg aagtggaaaagaggcgtgagatgtcccctgccctagttcacccattcatgcgcagtgttatggaagcaccattccctgct cctgggcgtaccatcactgtgaagagcttcctgcccggagctggcaatgaggtgattgaactttgccgtccactggattc ccgattagaacatgtagattttgaatgtctcttaaagtgcctcaatatctctcatttgatccaagtttgtgcttctcttc tgctagaaagaagggtgatctttgttgctgacaatctaagcaccttgtccaaatgtggccatgctgtggttgcaaccctc tacccatttacctggcaacacacttacatccctgtcctgccagcctccatgatagatattgtttgttcgcctactccttt tcttattggcatcctctcctgctccttaacacatctccaggacctgcctatagaagaggtactgatcgttgatctctgtg ctgataagtttctgcaaaaggtttcagatgaggatgaaattctacctcacaagcttcaggctgcacttgtacaaatctta gaagaaaggaatgaaatcttgtttcaggaacgctgctacacacaaggtgatgtgacactggactctctagtatcagaggc ttttgtgcgcttttttgtggaaattgtgggacactattctttgcacatgcatgtcactgagaaaggagagagagtattcc agcgggagcccttccggaagtcccatacgtcccgtagtgtgcgccatttcctagatatcttcatggagacacagatgttt gctggtttcatccaggaccgagagctgcggaagagtggggtaaaaggcttgtttgaagttcgtgccttggaatacttgga gaccattccagagactgagccaagtggaatgaacaaaatccttcgcagtctgggtaataaaatgaagtttctacaaaaga agtgagaagccaaatgcagaatcgctaagctttattttacgatactggcaagccataatgatgtggctgtgtcgctgtgg tattctattagattcttcaggtcccacttaaagaacttcagatgactggaaaaatgagcaccaaatatgaacagcatcct tgatctcagttctgcttggtctgcttggagtattactgagcaaaaaaggaacttctgtttacagagatgatctataaagc agaaataacagcagaaactatatccttatttatactgcatggctggaaaagattttcctcgtgttattaaaaatatgctc aaagcaatctcaa |
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Protein
| Protein ID | habu1_s3537_g11987.t1 |
|---|---|
| Definition | - |
>habu1_s3537_g11987.t1 MCQLRKAALLGSCEVASGGDGGGGRSQKGISVGVRERWKPYNIRILSFCKRSVDTSFSRTAVQTLSRSHCRNIKQKISQW EGRTKGICQEERQKLKDFGVKYGLDNKKKPSAPVPHKSIDGLVNVQHLGLDFWENSNLGSVTEEEEEEEEHRFQEISRNH LEEQLSSDTLSETADATEWSRERLPPGNFYTSRDLWKQIKTLPFDQEASVALDLKRKRESCGSTEKELNVAPAKNQETIY CDVESQERQPAINPVPKPQRTFRYHSEKDQGNFANNYHNNKKPLEQLCNGSYPATASYESDHRTGSRGIRGRSKRKSFEF EDIQSYRNRLAAIEYQKLHEELNGTTRVCLYCTQSEDNLYEDIIDPAKENPYEDIKVKPLWRIPSNWKLPPPRNTFKPPK LLHKPHFFHRKTLELKNTRICLRGKLPKDSTLPVTLTEWKFFKAGEAESKKRKNLPRLVLKIQEIFDSRRGKKRVKLVVQ TGKELSPAKGETSGYDSEPENLPKSRHKRLLQVQAQSKRNPHYQTLERDLIEFQEQQLFELFVVVSLQKKSSEATYTPQV IQQFPCKSDHPFRQSKDTEDRLKVIPKFCFPDPKDWCPTSETKSETFSFVLTGEDGSRWFGYCKRLLPEGKGKRLPEVYC MVSRLGCFNLFSKILDEVEKRREMSPALVHPFMRSVMEAPFPAPGRTITVKSFLPGAGNEVIELCRPLDSRLEHVDFECL LKCLNISHLIQVCASLLLERRVIFVADNLSTLSKCGHAVVATLYPFTWQHTYIPVLPASMIDIVCSPTPFLIGILSCSLT HLQDLPIEEVLIVDLCADKFLQKVSDEDEILPHKLQAALVQILEERNEILFQERCYTQGDVTLDSLVSEAFVRFFVEIVG HYSLHMHVTEKGERVFQREPFRKSHTSRSVRHFLDIFMETQMFAGFIQDRELRKSGVKGLFEVRALEYLETIPETEPSGM NKILRSLGNKMKFLQKK |
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