Gene
| Gene Model ID | habu1_s3695_g12429 |
|---|---|
| Locus | habu1_scaffold3695 : 454788 ... 474099 : + |
| To GenomeBrowser | habu1_scaffold3695:454788..474099 |
| Genes list of scaffold | habu1_scaffold3695 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna-directed primase polymerase protein isoform x1 | EC:2.7.7.0 GO:0006261 GO:0006974 GO:0016779 GO:0034654 GO:0043231 GO:0044710 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3695_g12429.t1 | 1 | 1 | Herpes_UL52 | 408 | 469 | 3.0e-14 | 52.4 | 9.7e-18 | 7.2e-14 | 51.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3695_g12429.t1 | gi|602631730|ref|XP_007422762.1| | PREDICTED: DNA-directed primase/polymerase protein isoform X1 [Python bivittatus] | 0.0 |
| habu1_s3695_g12429.t1 | gi|602631732|ref|XP_007422763.1| | PREDICTED: DNA-directed primase/polymerase protein isoform X2 [Python bivittatus] | 0.0 |
| habu1_s3695_g12429.t1 | gi|637306652|ref|XP_008110024.1| | PREDICTED: LOW QUALITY PROTEIN: DNA-directed primase/polymerase protein [Anolis carolinensis] | 0.0 |
| habu1_s3695_g12429.t1 | gi|641762276|ref|XP_008166617.1| | PREDICTED: DNA-directed primase/polymerase protein isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s3695_g12429.t1 | gi|591359088|ref|XP_007054525.1| | PREDICTED: DNA-directed primase/polymerase protein [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.9 |
| Venom grand-1 | 1.5 |
| Pit, infrared sensing | 2.3 |
| Nose | 3.7 |
| Brain-1 | 0.9 |
| Eye | 1.3 |
| fetal fibroblast | 3.1 |
| venom gland-2 | 2.0 |
| Brain-2 | 0.9 |
| Spleen | 2.9 |
| Lung | 3.8 |
| Liver | 1.4 |
| Kidney | 2.0 |
| Pancreas | 3.0 |
| Small intestine | 2.6 |
| Large intestine | 3.4 |
| Stomach | 4.0 |
| heart | 1.7 |
| ovary | 20.3 |
| cheek muscle | 1.0 |
Transcript
| Transcript ID | habu1_s3695_g12429.t1 |
|---|---|
| Definition | - |
>habu1_s3695_g12429.t1 cgcgggcgcggttttcttcctgccgtctttcgaagcttggctggcaaccgcggccctccctcgagaaggggctgcatgaa gccgccccctctccccgccgagatatttttctttacttttgaaaactaaagattgaaagctattgattgctgtgcaagga aactgtcatgaatatcggttcaaccaagagaaagtgggaagaaaaactgaagaatgttgaggaactagcatcttgctata tgcggaggcctctctgttcgagttacaagccaaaactgtccaatgcattgcaaccatcttcagtttggaaactattctat cggcaaactcatgcatttaactttgccaagacttgtaaagaggatgttcatgtatttgctttggaaaagtgtgatggaaa taatcaacggctctatcttgtgacaacatatacagaactttggttctactacagcaaacatgaaacaaaactgaagcatt gctatgaagttatcccagaaacagctgtttgcaaactttattttgatttggaattctacaaaccaacaaatcaggaagcc aatgcaaatcagatggtagcagacttaattaagtttataggtagaaaactagatgaatactatggaataaaatgctcagc tgagaatattttgaaattggattccagcactgaagaaaaatatagctgtcatttaatatttctattagaaaatgctgcat ttaagaataatatccacataggtaactttttaagaacaattttgcaacctgctattcttttaacgaagagtaaagatgca atggaccccccaaaaatcaactctgttggtcagtgttataaaactaccattgatttgcctacatgtcttgaaaacgacat tttagtcaaggatgcgtctcagaactggaaactcaactcttacaaaatatcagaaaaagggacgtcagaagaaaatccag atctttcttttttaatagtgaatagtaaacaaggagaaaagcaactgtttgtggatcttggggtttatacaaaaaataga aattttcgattatacatgtcatcaaaagcaggacacactgtcattttgaatattgcagaagataacaagtttgttcctaa acctgtaaacaattcttgcatagatgaacagtattttttgtcctccttgatctgcaatgtaagattttcagactgcttaa aaattttgacctgtgacaaccaagagcattcaagagaaccatccctatatttagaagacaaaatatcaaggaactgtctg gctccaatagaaggatgccactgttcaccttacccagaaattgataattttgtttgcacgttaatcaagaaagataatgt tcaaggagggataagaagatggaattacttttcacttgaacagcttattgtatatgatatctccaactatcggtggtgca gaaatattggcagagctcacaaaagtaataatataatgattataatagatttgaaaaatgaaaattggtatcagaaatgt catgatcctatttgcagagctgaaaacttcaagtcagaatgttttccactaccagctgaagtatgcttgcccttcctttt caaagaggatgaagattatgtaggtacaataagtgaaaataacactgaagaaagagcaaatacagttgatgttacagacg tattggacagcaaaacttttacttcaatgcaagaaaataacaagctaaacaagaaaagctccaatgttgaatgggatcat gagcttgacacctaccttttggaagcttctgaagatgtggaactaattgaagctactgatatttttcatacccagaagaa ctgtactgtgaatgaaatacctgatgagctcctagaaggtgttttaagaaattatgaagtaaagggaagaaaggaaagtt agaaaaatcttgtggatgaattaaatatcacactagcacaggtgtaggcaaccttggctcttttatgactcgtggacttc aacttccagaattcctaagccagccatgctgaggggaaagggagaggtttccaagctgagccatgctggctcaggaattc tgggagttgaaatccacgagtcataaaagagccaagattgcctacccctgcactagcagatacatttggcaatactgaaa acctagtaaaaaattaacttgattatttatctaaaactactctggcattatgtatataataaattttgtgtcaagctaca aaccc |
|
Protein
| Protein ID | habu1_s3695_g12429.t1 |
|---|---|
| Definition | - |
>habu1_s3695_g12429.t1 MNIGSTKRKWEEKLKNVEELASCYMRRPLCSSYKPKLSNALQPSSVWKLFYRQTHAFNFAKTCKEDVHVFALEKCDGNNQ RLYLVTTYTELWFYYSKHETKLKHCYEVIPETAVCKLYFDLEFYKPTNQEANANQMVADLIKFIGRKLDEYYGIKCSAEN ILKLDSSTEEKYSCHLIFLLENAAFKNNIHIGNFLRTILQPAILLTKSKDAMDPPKINSVGQCYKTTIDLPTCLENDILV KDASQNWKLNSYKISEKGTSEENPDLSFLIVNSKQGEKQLFVDLGVYTKNRNFRLYMSSKAGHTVILNIAEDNKFVPKPV NNSCIDEQYFLSSLICNVRFSDCLKILTCDNQEHSREPSLYLEDKISRNCLAPIEGCHCSPYPEIDNFVCTLIKKDNVQG GIRRWNYFSLEQLIVYDISNYRWCRNIGRAHKSNNIMIIIDLKNENWYQKCHDPICRAENFKSECFPLPAEVCLPFLFKE DEDYVGTISENNTEERANTVDVTDVLDSKTFTSMQENNKLNKKSSNVEWDHELDTYLLEASEDVELIEATDIFHTQKNCT VNEIPDELLEGVLRNYEVKGRKES |
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