Gene
| Gene Model ID | habu1_s3695_g12430 |
|---|---|
| Locus | habu1_scaffold3695 : 478941 ... 503697 : - |
| To GenomeBrowser | habu1_scaffold3695:478941..503697 |
| Genes list of scaffold | habu1_scaffold3695 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3695_g12430.t1 | 1 | 1 | CENP-U | 80 | 236 | 3.9e-10 | 39.9 | 8.0e-14 | 3.9e-10 | 39.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3695_g12430.t1 | gi|602631762|ref|XP_007422778.1| | PREDICTED: centromere protein U [Python bivittatus] | 0.0 |
| habu1_s3695_g12430.t1 | gi|719755441|ref|XP_010214493.1| | PREDICTED: centromere protein U [Tinamus guttatus] | 0.0 |
| habu1_s3695_g12430.t1 | gi|637306648|ref|XP_008110023.1| | PREDICTED: centromere protein U [Anolis carolinensis] | 0.0 |
| habu1_s3695_g12430.t1 | gi|698396504|ref|XP_009693492.1| | PREDICTED: centromere protein U [Cariama cristata] | 0.0 |
| habu1_s3695_g12430.t1 | gi|690459875|ref|XP_009328949.1| | PREDICTED: centromere protein U [Pygoscelis adeliae] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.3 |
| Venom grand-1 | 3.3 |
| Pit, infrared sensing | 10.9 |
| Nose | 8.4 |
| Brain-1 | 0.8 |
| Eye | 5.0 |
| fetal fibroblast | 48.0 |
| venom gland-2 | 2.8 |
| Brain-2 | 0.6 |
| Spleen | 2.9 |
| Lung | 1.6 |
| Liver | 1.0 |
| Kidney | 5.2 |
| Pancreas | 3.5 |
| Small intestine | 1.9 |
| Large intestine | 2.7 |
| Stomach | 5.8 |
| heart | 3.3 |
| ovary | 130.8 |
| cheek muscle | 2.6 |
Transcript
| Transcript ID | habu1_s3695_g12430.t1 |
|---|---|
| Definition | - |
>habu1_s3695_g12430.t1 gggcgggaggcctcccggctgcggcagtagcgtttcggcgtaggaagctccgacctgttaacaagatgccaaagagaaaa gcaaccaaagtttccaaaaaggaattggcaggatatcaaaccaagccagactctcagggtaaactgttttcatctgagga gcctgatgtctcaagtattttgaaaattcctggaaccggacaaacagaggaaactgaagacttatttgatcatcctttac atagcactcctctatctgtgtacgaggaggaagaagaggctaataatgggaacgatcaatattcaacactgaatgagtct gccagcaatttctctgatccagagtccccaaagaaaaatgcaaagaaaagaaaaactcgcgttctgaaaacaatggtgag aactgaagattcagaagaggaatcttcagtaaagaacacgataccccaaaaaaagactcgatcccatgtaaataagaatg ttttaccagaaggggagacacattgtccagtttcaaaaacagttccaaagcagccaacgaaagttaccagatatgttacc aaggaaaaagttgttttgagggagcttgaaaagataacaacagaattcaaaaaagaagtgaaacaggagaagtatacaaa agtaattgataaatttcataccaggctcaaagatgaactcaccgacatttctgcagatgctgagaaactgaaaaatacaa aattgaaacaagcaaagatggtcagaaagacaaataagaaaagaaaacgtttaatagaaattaaaggagacctatttaga aatgaattagaactgaagaaactaaagaaagaatacagcaaactgcaagaaaaaatgtcctgtctcacgaatgcagttca gtttattaaagatttaaagagtcttcagcaaatgaagaatgaaaaggaaaactcacaagaaaaactagtatatggcattt ccagtcttcctgcacttctgatggagtcacgaagaattttaggagcagaaagtcacttacaaaatatcaacacaaaatta cagaaaagtttggaattgcaaaaaactaagtattcatactaaaaattatattctgtattatcagatgtacaatgtattaa aatataaagtagaagttgaagtaggaaaactataaataattggagtttttttccagtgatctaaactccataaattcctt ttggcatgcttactggtatatttagatatgattaactcaaaaataaaaatcttttgtttggcaaagaagaaataatgagg caacaaaacagaccattgaatcataaatatagaatttaaatagatttactttgtgtgagaacaagtgatctttaacctat tctttcataaaagtagactttccaacagagaaataatcttgctattatttagttgcagtaatgtttcatctggcaaggca tatgtagctgcatgttgagtacatatatgctgctttccaagaaagaagatggttgttgaaaaattaaaacttagagcgta tgcttctagttgtcagctctgaatatatcacattactatttatgtatttgcattactatttacatatttggcaattcaat aaaatccttttctgaaatcctaaaa |
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Protein
| Protein ID | habu1_s3695_g12430.t1 |
|---|---|
| Definition | - |
>habu1_s3695_g12430.t1 MPKRKATKVSKKELAGYQTKPDSQGKLFSSEEPDVSSILKIPGTGQTEETEDLFDHPLHSTPLSVYEEEEEANNGNDQYS TLNESASNFSDPESPKKNAKKRKTRVLKTMVRTEDSEEESSVKNTIPQKKTRSHVNKNVLPEGETHCPVSKTVPKQPTKV TRYVTKEKVVLRELEKITTEFKKEVKQEKYTKVIDKFHTRLKDELTDISADAEKLKNTKLKQAKMVRKTNKKRKRLIEIK GDLFRNELELKKLKKEYSKLQEKMSCLTNAVQFIKDLKSLQQMKNEKENSQEKLVYGISSLPALLMESRRILGAESHLQN INTKLQKSLELQKTKYSY |
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