Gene
| Gene Model ID | habu1_s3695_g12436 |
|---|---|
| Locus | habu1_scaffold3695 : 672438 ... 730152 : + |
| To GenomeBrowser | habu1_scaffold3695:672438..730152 |
| Genes list of scaffold | habu1_scaffold3695 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sorting nexin-25 | GO:0005768 GO:0030512 GO:0032801 GO:0034713 GO:0035091 GO:0038032 GO:0060394 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3695_g12436.t1 | 1 | 1 | PXA | 198 | 356 | 4.9e-32 | 111.0 | 1.6e-35 | 4.9e-32 | 111.0 |
| habu1_s3695_g12436.t1 | 1 | 1 | RGS | 488 | 601 | 1.2e-18 | 67.2 | 4.2e-22 | 1.2e-18 | 67.2 |
| habu1_s3695_g12436.t1 | 1 | 1 | PX | 723 | 821 | 6.1e-18 | 64.6 | 2.1e-21 | 6.1e-18 | 64.6 |
| habu1_s3695_g12436.t1 | 1 | 1 | Nexin_C | 897 | 1002 | 4.8e-32 | 110.4 | 7.6e-35 | 2.3e-31 | 108.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3695_g12436.t1 | gi|602633764|ref|XP_007423759.1| | PREDICTED: sorting nexin-25 [Python bivittatus] | 0.0 |
| habu1_s3695_g12436.t1 | gi|641762299|ref|XP_008166624.1| | PREDICTED: sorting nexin-25 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s3695_g12436.t1 | gi|637306623|ref|XP_008110019.1| | PREDICTED: sorting nexin-25 [Anolis carolinensis] | 0.0 |
| habu1_s3695_g12436.t1 | gi|558186767|ref|XP_006128541.1| | PREDICTED: sorting nexin-25 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s3695_g12436.t1 | gi|558186771|ref|XP_006128542.1| | PREDICTED: sorting nexin-25 isoform X2 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.9 |
| Venom grand-1 | 2.9 |
| Pit, infrared sensing | 3.7 |
| Nose | 4.8 |
| Brain-1 | 7.0 |
| Eye | 8.7 |
| fetal fibroblast | 7.7 |
| venom gland-2 | 5.5 |
| Brain-2 | 7.3 |
| Spleen | 3.5 |
| Lung | 1.9 |
| Liver | 1.6 |
| Kidney | 1.3 |
| Pancreas | 3.9 |
| Small intestine | 1.8 |
| Large intestine | 2.0 |
| Stomach | 2.6 |
| heart | 1.7 |
| ovary | 12.1 |
| cheek muscle | 2.0 |
Transcript
| Transcript ID | habu1_s3695_g12436.t1 |
|---|---|
| Definition | - |
>habu1_s3695_g12436.t1 ggagatgtgctgctttccggcggctcctagagcagcatgttccccgatactggcgctaacacctcctctggcaggagcag cgggcaggtggaatccgcaggcgccgcggtcggctccggcgcctctggagccccaagtcccgggcgcggggaatcctgca agaagagtagcagcgtcgcagccgcggccgaaggcgacggcgaagaggacgaagaagcggcggcggcggcggcggcggcg aaggctcccatcctgtggagccgctccatgctggccaccggactggggatggtggggttggccgtcttcctcttccatct ggggcagcagaaggcgccgccggagaaggaggaggaggaggtcggcggacagctgtacgtggcctggctcctgctccggc ttgtcctgtacctggtttgtgctgccggcgccttcttactcggtttattgctggctttggggggccaaagtggcggccgc ctccgccccccgccgggtttcctcgccgcctggaagcgccgttacctgggaagagcgagcgcggcgtcgttctggcgagc tgccgggaacctcatatctggaaatgtacaagaaccagtccagtcaaggagagtggtaatttctcataacatggacaaag ctctgaaagaagtgtttgactacatctaccgagattacattatgtcttggtatggaaacctcagcagagatgaaggacag ctgtatcatctactgtctgaagacttctgggaagctgccaagcagctgcggcacaggctcagtcacattgatgtagttag aatcatttgcaatgatgtagtgaaagctgtgctcaaccatttctgtgatcttaaagcagccaatgccagattggaagaac aaccacggccatttttactgcatccttgtttgaggaactctgaagaagaggcaagattcctgcaagcatgctctcagact ctggtctattgtcttctgccatcaaaggatgctcagtctttaagcttgcgtatagtcctagcagagatacttgcagcaaa agtactgaaaccaatggtagaactgttgagtgatccaaactatattaaccacatgttgcttgtccagatggaatacagag aacagctgattgagcgtcacaagagagcctatacatatgctccttcttatgaagagttcatcaaacttattaactgtaac tcagatattgagttcctcaaacgattaagatatcagattatggtggaaatagttcaagcaaccactatcagcaacatccc ccagatgaaacgccaaaaagagaacaaggttaaagagacggctgcaatgaaagcagatcatttgagggccagaaacatga aaagatatattaatcaactaacagtagcaaaaaaacaatgtgaaaaacgcatacgacttctgggaggccctgcttatgac caaccagaagatggtatttttgaagatagtgaaagtcctcagagccaaaagatacttcagtttgaagatatattgtgtaa tccatcctacagagagcactttcaaatatacatggaaagaatggataagagggttctgatcagctattgggaatctgtag aatacttgaagaatgctaataaggctgaaatacctcaacttgtgagtcaaatctatcaggatttttttgtggaaagcaga gaaattcctgtggaaaaaatactctacaaagagatacaacagagtcttgtgggtaacaagggcattgaggtgttttataa aattcaggctgatgtttatgaaacactgaaagacagatactatccatcattcattgtcagtgatttatatgagaggctga tcaagaaagaagagaggaatcctgtccagatggcatctgacgacaaagatgatagacaagtttgtgaagaagttattgat ggaggaagctcagaaattaatgaacaggccagttatgctgtaaataaactacgcctattaaatgacaaacttgaatataa gagacaagctctaaattctctctgtagttcaccaaaacctgacaaaaagattgtttctaaattgaaagatgaaatcagtc tgatggagcgagaacatagtgaccttcaattgcatattgaaagaacagattgctggtgtgaaaatcttggcatgtggaaa gccttcattaatactggagaggtcattgaagaaaatggtgaacaagtgccctattattctgttgtagtgatattacggga gattggcagggttgaagcgaaggagtggacagttgtccgaaagctcaacgagtttcaaagtctgcatcggaaactcagtg agtgttttccatcattaaagaaaactcagttgccatcactcagcaaattgccctttaaatctgtagaccagaaattcatg gagaaatctaagaaccaattaaataacttcttacagaaattgctttctgatgaaaggctatgtcagagtgaagcacttta tgccttcttaagtccttctcccgaataccttaagattatcgacatacagggaaagaagtcaaatttttcactctcttcct ttttggagaggcttcctggtgacttcttttctcatcaggaggaagaaactgaagatgatgatctatctgactacggggat gatgtggatgggaaacgggatgcccttgcagagccttgtttcatgctgataggagagatttttgagctgcgaggaatgtt taagtgggtgaggaagacactaattgcactagttcagatcacttttggaagaaccatcaacaaacaaattcgtgacactg taaattggatcttcagtgagccaatgcttgtttactatatcaatatttttcgagatgcattttggccaaatgggaaactg gcatccagcccaaagccaataaatgaacagcaaagtcaagaaacaaaacagaaagcacagcagaaactacttgaaaacat tccagacactctccaaagtcttgttggacagcaaaatgctcgccatggtgtaataaaagtgttcaacgcacttcaagaaa ccaaggccaataagcatcttctttatgtattattggaaatgctgctacttgaattgtgtcctgaactgcgaattcattta gagaaggttaaagcagctcaggtttgaatgttcagatttacacaaagcaaagcagacttgaaaagaacagataattagaa tgccagcaatgtgtagtttctggcttttatttaacttgttatatgaataaatctctttaagatacagattgaaatttgaa tgttaatataagatatatgaaatataaagtattttaaacatttacaaaaggcattttgctttagtgatatcttaatggat gttgtacagttatttttttcgctgaggatactgactgttcctctattttcttgtgtattgatgagccttgtgcaatatat gtaaagatactgtgtaaattttactgcttttatttttaccaaagattttccatagtttgcagcctttgtaagcaataaat tataaaagtagagtacaccgcttcataattacaactcttattacagcttgaaagttggagtgttgtttcagagaactgta tttatttgtttgaacattacagacaaccaaaatgtagtgctatcttgaaatacattgtgagcgaatcagccttaagcagg atataaatatcttatcatcctaataaattgaagtgcagttaaatcatcc |
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Protein
| Protein ID | habu1_s3695_g12436.t1 |
|---|---|
| Definition | - |
>habu1_s3695_g12436.t1 MFPDTGANTSSGRSSGQVESAGAAVGSGASGAPSPGRGESCKKSSSVAAAAEGDGEEDEEAAAAAAAAKAPILWSRSMLA TGLGMVGLAVFLFHLGQQKAPPEKEEEEVGGQLYVAWLLLRLVLYLVCAAGAFLLGLLLALGGQSGGRLRPPPGFLAAWK RRYLGRASAASFWRAAGNLISGNVQEPVQSRRVVISHNMDKALKEVFDYIYRDYIMSWYGNLSRDEGQLYHLLSEDFWEA AKQLRHRLSHIDVVRIICNDVVKAVLNHFCDLKAANARLEEQPRPFLLHPCLRNSEEEARFLQACSQTLVYCLLPSKDAQ SLSLRIVLAEILAAKVLKPMVELLSDPNYINHMLLVQMEYREQLIERHKRAYTYAPSYEEFIKLINCNSDIEFLKRLRYQ IMVEIVQATTISNIPQMKRQKENKVKETAAMKADHLRARNMKRYINQLTVAKKQCEKRIRLLGGPAYDQPEDGIFEDSES PQSQKILQFEDILCNPSYREHFQIYMERMDKRVLISYWESVEYLKNANKAEIPQLVSQIYQDFFVESREIPVEKILYKEI QQSLVGNKGIEVFYKIQADVYETLKDRYYPSFIVSDLYERLIKKEERNPVQMASDDKDDRQVCEEVIDGGSSEINEQASY AVNKLRLLNDKLEYKRQALNSLCSSPKPDKKIVSKLKDEISLMEREHSDLQLHIERTDCWCENLGMWKAFINTGEVIEEN GEQVPYYSVVVILREIGRVEAKEWTVVRKLNEFQSLHRKLSECFPSLKKTQLPSLSKLPFKSVDQKFMEKSKNQLNNFLQ KLLSDERLCQSEALYAFLSPSPEYLKIIDIQGKKSNFSLSSFLERLPGDFFSHQEEETEDDDLSDYGDDVDGKRDALAEP CFMLIGEIFELRGMFKWVRKTLIALVQITFGRTINKQIRDTVNWIFSEPMLVYYINIFRDAFWPNGKLASSPKPINEQQS QETKQKAQQKLLENIPDTLQSLVGQQNARHGVIKVFNALQETKANKHLLYVLLEMLLLELCPELRIHLEKVKAAQV |
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