Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s3695_g12439
Locus habu1_scaffold3695 : 754352 ... 769727 : -
To GenomeBrowser habu1_scaffold3695:754352..769727
Genes list of scaffold habu1_scaffold3695

Annotation by Blast2GO
Annotation GO
ufm1-specific protease 2 GO:0006508 GO:0008233 GO:0044424

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s3695_g12439.t1 1 1 Peptidase_C78 294 377 1.6e-16 60.0 4.4e-20 3.3e-16 59.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s3695_g12439.t1 gi|602633762|ref|XP_007423758.1| PREDICTED: ufm1-specific protease 2 [Python bivittatus] 0.0
habu1_s3695_g12439.t1 gi|637306611|ref|XP_008110017.1| PREDICTED: ufm1-specific protease 2 isoform X2 [Anolis carolinensis] 0.0
habu1_s3695_g12439.t1 gi|327273803|ref|XP_003221669.1| PREDICTED: ufm1-specific protease 2 isoform X1 [Anolis carolinensis] 0.0
habu1_s3695_g12439.t1 gi|704172133|ref|XP_010132194.1| PREDICTED: ufm1-specific protease 2 [Buceros rhinoceros silvestris] 0.0
habu1_s3695_g12439.t1 gi|719781529|ref|XP_010222267.1| PREDICTED: ufm1-specific protease 2 [Tinamus guttatus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.5
Venom grand-1 5.8
Pit, infrared sensing 4.0
Nose 5.9
Brain-1 5.5
Eye 4.3
fetal fibroblast 8.6
venom gland-2 8.6
Brain-2 4.2
Spleen 3.5
Lung 2.6
Liver 3.1
Kidney 3.1
Pancreas 3.2
Small intestine 4.2
Large intestine 4.1
Stomach 3.9
heart 3.2
ovary 6.7
cheek muscle 2.9

Transcript
Transcript IDhabu1_s3695_g12439.t1
Definition-
>habu1_s3695_g12439.t1
gtttgttgtgcaaagagagggagagtagagcggaagagtgacgtgtcggcttgtgggacgggggggagggcctcgatcgg
agaggaggagcatgccgctgccgggattgcttcttcctgacgttttactgacggacgtggtcatcatagacactatggat
atactttttagaataagaggaggcttggattttgcatttcaattagccactactgatgactcatccacaaaagaggcact
caaatacattttcaaggatctttcagctaaactggcttctgatatgctggtattcaggatttgtcatagctcagtatatt
tgtggccaaacagtgggatgaactccatggcaactgagctttcagatgactctgcctgcaaggagatactacagtttatt
caatttgaacaagggggcaccaagcagagattttcaaaaaagaaagataaaaagttacaagagatgccatcaatagtaaa
tattgatctcatgttggaaattacaacctcatttgagcctttggctccagtaattgaaaaggaaagcaaagagcatcact
acattagcatgacattgccggttgatgttgtggtctctgtttctcctgaagaaacatggcgcaatgtaagaagcctccta
gtgaatgcaattcacacgcagctagcagatatggaaagatgcattttgcaacacatgagaggcacatcagttgtggtgcc
cgaacaatttcatttcatgttaccaggaaaaaagcatctagtaacagtttcgtttcctgcaggcatttctgatgatcagc
tggagacttaccgaaaggaattacatgggcaatttaatctaccgcttgataggccttatttccgaagaagtaatgcctat
cactttcctgatgaatcttttaaagatgggtatctcagaaacccacatctacatctcaatcaacctggaatagagtctgg
tatgggatctgaactggcttctcaaggaagagaacttgctaatcatttcaagattgaaggaacaccagtgatgatcggtg
gtggagtcttggcacacactatattaggagtggcatggaatgagatcactgggcacattaaatttttgattctggatcca
cattacactggcgctgaagatctgcatgttatattagaaaagggctggtgtggctggaagggtccagatttctggaacaa
agatgcttattataatctgtgtctacctcagcgaccaaaatgtatttgaatacctatgttgaattataagtgtgataaac
tagttggtttctgtatatatgatgtatttgtatttaatatcatgcttcttacaaccccattgaaataaaattactgctct
agtatttcagagcacaaattatgtataagattatttttcaaataaaatctgattatatcctattaatg

Protein
Protein IDhabu1_s3695_g12439.t1
Definition-
>habu1_s3695_g12439.t1
MPLPGLLLPDVLLTDVVIIDTMDILFRIRGGLDFAFQLATTDDSSTKEALKYIFKDLSAKLASDMLVFRICHSSVYLWPN
SGMNSMATELSDDSACKEILQFIQFEQGGTKQRFSKKKDKKLQEMPSIVNIDLMLEITTSFEPLAPVIEKESKEHHYISM
TLPVDVVVSVSPEETWRNVRSLLVNAIHTQLADMERCILQHMRGTSVVVPEQFHFMLPGKKHLVTVSFPAGISDDQLETY
RKELHGQFNLPLDRPYFRRSNAYHFPDESFKDGYLRNPHLHLNQPGIESGMGSELASQGRELANHFKIEGTPVMIGGGVL
AHTILGVAWNEITGHIKFLILDPHYTGAEDLHVILEKGWCGWKGPDFWNKDAYYNLCLPQRPKCI

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