Gene
| Gene Model ID | habu1_s3726_g12520 |
|---|---|
| Locus | habu1_scaffold3726 : 1 ... 6675 : - |
| To GenomeBrowser | habu1_scaffold3726:1..6675 |
| Genes list of scaffold | habu1_scaffold3726 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 45 kda calcium-binding protein | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3726_g12520.t1 | 2 | 1 | EF-hand_7 | 95 | 150 | 1.9e-15 | 56.7 | 4.5e-10 | 7.4e-07 | 29.2 |
| habu1_s3726_g12520.t1 | 2 | 1 | EF-hand_1 | 133 | 150 | 8.3e-16 | 56.0 | 2.8e-06 | 0.0046 | 16.1 |
| habu1_s3726_g12520.t1 | 2 | 1 | EF-hand_5 | 133 | 150 | 3.6e-12 | 45.0 | 8.4e-07 | 0.0014 | 17.8 |
| habu1_s3726_g12520.t1 | 1 | 1 | EF-hand_8 | 133 | 149 | 2.2e-06 | 27.2 | 4.3e-06 | 0.0071 | 15.9 |
| habu1_s3726_g12520.t1 | 2 | 2 | EF-hand_7 | 200 | 247 | 1.9e-15 | 56.7 | 9.5e-08 | 0.00016 | 21.7 |
| habu1_s3726_g12520.t1 | 2 | 2 | EF-hand_1 | 225 | 247 | 8.3e-16 | 56.0 | 5.1e-06 | 0.0084 | 15.3 |
| habu1_s3726_g12520.t1 | 2 | 2 | EF-hand_5 | 273 | 291 | 3.6e-12 | 45.0 | 4.2e-06 | 0.0069 | 15.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3726_g12520.t1 | gi|602638959|ref|XP_007426302.1| | PREDICTED: 45 kDa calcium-binding protein isoform X1 [Python bivittatus] | 0.0 |
| habu1_s3726_g12520.t1 | gi|530598905|ref|XP_005292954.1| | PREDICTED: 45 kDa calcium-binding protein [Chrysemys picta bellii] | 0.0 |
| habu1_s3726_g12520.t1 | gi|677996848|ref|XP_009076631.1| | PREDICTED: 45 kDa calcium-binding protein [Acanthisitta chloris] | 0.0 |
| habu1_s3726_g12520.t1 | gi|704477924|ref|XP_010072738.1| | PREDICTED: 45 kDa calcium-binding protein [Pterocles gutturalis] | 0.0 |
| habu1_s3726_g12520.t1 | gi|697849374|ref|XP_009645053.1| | PREDICTED: 45 kDa calcium-binding protein [Egretta garzetta] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 46.8 |
| Venom grand-1 | 130.1 |
| Pit, infrared sensing | 54.7 |
| Nose | 59.2 |
| Brain-1 | 22.2 |
| Eye | 57.6 |
| fetal fibroblast | 100.3 |
| venom gland-2 | 326.0 |
| Brain-2 | 23.6 |
| Spleen | 61.0 |
| Lung | 45.5 |
| Liver | 227.6 |
| Kidney | 79.8 |
| Pancreas | 120.8 |
| Small intestine | 68.3 |
| Large intestine | 48.1 |
| Stomach | 66.8 |
| heart | 39.7 |
| ovary | 61.6 |
| cheek muscle | 89.2 |
Transcript
| Transcript ID | habu1_s3726_g12520.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12520.t1 aacgggtcttcatctgcagcttgggctccatctatttatccctcctctttgtctttttgctcatggatgtgtatgctcgg ccggccaacagctccatcctcaaggagaaagccgccgacaacaaagacgaaaacgagatcctccctccggaccacttgaa cggggtcaagatggagctggacgggcatctcaacaaggagttccaccaggaggttttcctggggaaagagatggaggaat ttgaggaagactcggaaccccggagaaacaggaagaagctggtggtgattttctcaaagaagttggacttgatgacctct gtggttcctctcccagcttctctgaaaagggtcgacatcaaccgcgacaaaaaaatcagcgccaaggagatgcagcgctg gatcatggagaagaccgaggagcacttccaggaggccgtggaagaaaacaagatgcatttccgggccgtggaccccgacg gcgatggtcacgtgtcctgggatgaatataaaatcaagttcctggccagcaaaggcatgaatgagaaggaggtggcggaa aagatcaagaacaacgaagagctgaagattgacgaggagacccaggaagtcctcgacaacttgaaggaccgctggtacca agcggataaccctccagctgacctgttgctgaacgaggaagagtttttgtctttccttcatccagagcacagcagaggga tgctgaagtttatggtcaaggaaattgtccgggatttggatcaggacggcaataggaagctgaccctttccgagttcatt tccttgccggttggcacggtggaaaaccaacaagcccaggatgtggacgacgactgggtgaaagaccggaagaaagagtt cgaagaagtcattgacgccaaccgtgacggcatcgtcaccatggaagagctggag |
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Protein
| Protein ID | habu1_s3726_g12520.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12520.t1 MDVYARPANSSILKEKAADNKDENEILPPDHLNGVKMELDGHLNKEFHQEVFLGKEMEEFEEDSEPRRNRKKLVVIFSKK LDLMTSVVPLPASLKRVDINRDKKISAKEMQRWIMEKTEEHFQEAVEENKMHFRAVDPDGDGHVSWDEYKIKFLASKGMN EKEVAEKIKNNEELKIDEETQEVLDNLKDRWYQADNPPADLLLNEEEFLSFLHPEHSRGMLKFMVKEIVRDLDQDGNRKL TLSEFISLPVGTVENQQAQDVDDDWVKDRKKEFEEVIDANRDGIVTMEELE |
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