Gene
| Gene Model ID | habu1_s3726_g12522 |
|---|---|
| Locus | habu1_scaffold3726 : 36097 ... 67865 : - |
| To GenomeBrowser | habu1_scaffold3726:36097..67865 |
| Genes list of scaffold | habu1_scaffold3726 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein fam132a | GO:0005179 GO:0005615 GO:0035774 GO:0045721 GO:0046326 GO:0046628 GO:0050728 GO:0051897 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3726_g12522.t1 | 1 | 1 | C1q | 214 | 289 | 8.8e-07 | 28.9 | 3.6e-10 | 1.8e-06 | 27.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3726_g12522.t1 | gi|602638983|ref|XP_007426314.1| | PREDICTED: protein FAM132A [Python bivittatus] | 0.0 |
| habu1_s3726_g12522.t1 | gi|591351622|ref|XP_007070261.1| | PREDICTED: protein FAM132A [Chelonia mydas] | 0.0 |
| habu1_s3726_g12522.t1 | gi|704231891|ref|XP_010151014.1| | PREDICTED: adipolin [Eurypyga helias] | 0.0 |
| habu1_s3726_g12522.t1 | gi|557266953|ref|XP_006018872.1| | PREDICTED: protein FAM132A [Alligator sinensis] | 0.0 |
| habu1_s3726_g12522.t1 | gi|530598909|ref|XP_005292956.1| | PREDICTED: protein FAM132A isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 1.3 |
| Nose | 0.2 |
| Brain-1 | 0.2 |
| Eye | 0.9 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.3 |
| Brain-2 | 0.2 |
| Spleen | 0.1 |
| Lung | 2.6 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.6 |
| Small intestine | 0.2 |
| Large intestine | 1.4 |
| Stomach | 5.4 |
| heart | 0.2 |
| ovary | 0.8 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s3726_g12522.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12522.t1 gtgtggaaattggtcctaagtccctttcttcagtgccattgtaactttgaacggtcactaaacgaacggctatgctgtcc cacaaagacagaagacgacgctggatttggtttgtcctggcgatgctgatctgccaagagttcccaaatttcccgctggt ggtggcagccaagaaagagcggaagaaaccaaaggagcctaaccaatacacggaagctctcaacgcaacagctctttcca acagcgaagaattgaacggacactccaagatgctagagtccccagacccgcccatcaccgatccacgccggacatggatt tcgtttgtacagcgtccgggtgaaggaagcaactccaaaaagaaatgcaaaggaaaagataaaaaacgtggtcttgctgg tcctccagggcccccaggtcctccagggccccctggtcttcctggagctgaagtcacctatgaggtcttaatgcaagaat ttaaagaaatgttaagagaagctactgaacggcgggcatctccagttctcccatcccatcccagtgagatgcctgtgatg ttactgcctctggaggagatttccctctaccgacgagtggaggaagccttccattgcaagctcaagggtcaaatcatcgt ggacaagaaaactttgatggaactccagaactttcagatgcctttagccaaaggagcttttctccgaggatctggattaa acttaacaactggcagatttacagcttcagtatctggaatttatcagttttcagccaacgtccatgtagaccatagtgag ctgaaaagtaaactgcagcttcgaggaagagacaatgttcgggtcttgatctgcattgaatccctctgccaccgatacac atctttggaggttatcgctgggctggaaagcaacagtaaagtttttactgtttatgttcatggattgctccaactccagg ctggacaatacacctccatctttgtggacaacagcgctggtgcccccgttaccattcaaaatggatctgactttatgggc atgtttgtggtggctggaaacttctcgccggagccaaagttggtccatacttggcgaagacgggccatttgtctgcccac cccgattgcattccagtcctcgggctggaaaatgtttaagacaggctgtgctcgcccgtggatgtcgtacaaccggatcc actgtgggctgcagaaaagcagggagcgaattcggttttgaagatcaggcctggaagggcgtttctgggaagcagatgga tgccatgctaacaagctaaaactgtaggtcaggcaactgggggtttagaagatggggacagggccagtgtgtcagtgcga ctgcctaggcattaagattagaatatagaatagannnnnnnnnnnnngaatagaataatgcagaatagaatacagaatag aatatagaatagaatagaatagaatagaatatagaatagaatagaatatagaatagaatagaatagaatagaatagaata gaatagaatagaatatagaatagaatagaatagaatagaatatagaatagaatagaatagaatagaatagaatagaatat agaatagaacagaatagaatagaatagaatagaatagaatagaatagaatagaatatagaatagaatagaatagaataga |
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Protein
| Protein ID | habu1_s3726_g12522.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12522.t1 MLSHKDRRRRWIWFVLAMLICQEFPNFPLVVAAKKERKKPKEPNQYTEALNATALSNSEELNGHSKMLESPDPPITDPRR TWISFVQRPGEGSNSKKKCKGKDKKRGLAGPPGPPGPPGPPGLPGAEVTYEVLMQEFKEMLREATERRASPVLPSHPSEM PVMLLPLEEISLYRRVEEAFHCKLKGQIIVDKKTLMELQNFQMPLAKGAFLRGSGLNLTTGRFTASVSGIYQFSANVHVD HSELKSKLQLRGRDNVRVLICIESLCHRYTSLEVIAGLESNSKVFTVYVHGLLQLQAGQYTSIFVDNSAGAPVTIQNGSD FMGMFVVAGNFSPEPKLVHTWRRRAICLPTPIAFQSSGWKMFKTGCARPWMSYNRIHCGLQKSRERIRF |
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