Gene
| Gene Model ID | habu1_s3726_g12524 |
|---|---|
| Locus | habu1_scaffold3726 : 96486 ... 110284 : + |
| To GenomeBrowser | habu1_scaffold3726:96486..110284 |
| Genes list of scaffold | habu1_scaffold3726 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3726_g12524.t1 | 1 | 1 | ASC | 34 | 529 | 0.0 | 335.8 | 0.0 | 0.0 | 335.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3726_g12524.t1 | gi|602638981|ref|XP_007426313.1| | PREDICTED: amiloride-sensitive sodium channel subunit alpha-like [Python bivittatus] | 0.0 |
| habu1_s3726_g12524.t1 | gi|530599178|ref|XP_005293087.1| | PREDICTED: amiloride-sensitive sodium channel subunit delta [Chrysemys picta bellii] | 0.0 |
| habu1_s3726_g12524.t1 | gi|564242110|ref|XP_006277862.1| | PREDICTED: amiloride-sensitive sodium channel subunit alpha-like [Alligator mississippiensis] | 0.0 |
| habu1_s3726_g12524.t1 | gi|557267004|ref|XP_006018896.1| | PREDICTED: amiloride-sensitive sodium channel subunit alpha-like [Alligator sinensis] | 0.0 |
| habu1_s3726_g12524.t1 | gi|701298121|ref|XP_010009382.1| | PREDICTED: amiloride-sensitive sodium channel subunit alpha-like [Nestor notabilis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.1 |
| Brain-1 | 0.1 |
| Eye | 0.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.1 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.5 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s3726_g12524.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12524.t1 gcatttgcctccgggttgccctacttgagaattccaaatttctgttccaggtttatagaatgggggaagatttgccgaaa gacgcagaggcagaagcaaaggaggacgacgcagccctcattgagttttacagctctttcaaggacctgtttgagttctt ctgtctaaacaccacgatccacggcaccatccgcctggtctgctcaaacagcaataagatgaagaccgcgttctgggctc tgctcttcttaaccagctttgctatgctctactggcagtttgcactgatcttcaaccagtactgggcctatcccgtcgtc atgtccatgtctgttcattcagaacccaagatgttccctgccgtcaccctttgcactttgaatccttataggatcagccc agtcaatcaagatatagctaagctggataacctagcgcgagagaccttgtacaatttatacggcttccacattcctaaga gcactctagaagatgtcagtatcgacttttacgaagaacatcctggcaaggccaaccgttccaagtttcatctggatcgt aatatcgccctagtgaagatgggtgggaaagtgggttttcggctgtgcaacacaacaggcgaaagctgctacaacaaggt ctacatttctggagtggatgctatccaagagtggtacaggttccactacatgaatatcatgtcgcagattccctccatta tcaaaatgtctccacgtgatggtcacatcaaaaacctgatctattcttgccaatacgatgggcagccgtgccgaacaagt gatcacgaacattttcaccaccctgtctacggaagctgcttcacccttaacaagaatggaacggacaagttctggaaagc tttcaagccaggaattgtttatggcctctctcttattctcaaagtggaccaaaaagaccacatcccgctgctgtccacca cggccggcgtgaaagtcatgattcacaggcacaaccagaccccctttttagagcacgaaggttttgatatcaggcctggg attgaaagcaccattggaatcaaacaggacgaggtgtcccgcttgggtgggagttacggcctatgtaccaataatgggga agatgtcaacatcaagttactctacaacagcacatatacgctgcaggcctgtttgcattcttgcttccagcatcatatgg ttgagaagtgtggctgcggatattatttttacccactaccatcgggagccgagtattgcaactacaataaacatcctgcc tggggtcactgcttctatttgctgtacaaaaagctcacggaccaccatttaatctgctttagcgagtgccctaagctgtg caaggaaacttggttcaagctttccgcgggatacgctaactggccatcaactaaatctgagaaatggattcacagagcgc tgcaggcagacaacaggtacaacatcaccaccacgaaaagcaaggatattgccaaggtgaatattttctatgagcaatta gattactactcttgggatgaatctccagaatataatgtgaccctggtgatgtccaacatgggaagccaatggagcctttg gtttggatcttctgtactctcggtggtcgagatgtttgagttccttgtggatgtcaccatcttatctctcattttcttct atcggcggcttacagctaagagaagacacaaggtgtcaagtccccctaaggtgccaagtgtgagtttgactttggagaaa taccgctacattgaagaaggcttggccccagaccaagatgcagagaaatctcaggccagccacgagaatccgtccttcgt ccacgacgagggactccctccgtattccaaatatagcaaatatcagatgccggaactatatccacgggtggttcttcaca gatttaagcaccaagaagaccaagggacatgccaggatcccaagagttaacggcattggaagagattcatgaaaccattt tcaaaggacggaggaaatggagcctgcgaaggaagtggcgaattccacacactcggaaatctcaaagccaaaaggatagg acccatgggattgggcattcaacaggtggtggaatttgtgactttcctcttccaggtttttcagatggtgctggggcaga tcagcgaccatgcctgtaagtgaaagacaggacttcctcaatgggctaggtcatggaggtctaacactctgccctccttt ttcccacggtctaggcagttgacacttcatgcagacgaattcctggatcgacttgaaaatgtgtcttccttttgttactt ctgttgcagtatttgtcctatggataatcagttttattttgagctgttccgcagcctcttttaaaagtaatgcaccacgt tgttttgagaagtctactttttgtgagctggggcagcggtttgccagttccctattaaaaaaaaaaaaaaaatctgtctt a |
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Protein
| Protein ID | habu1_s3726_g12524.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12524.t1 MGEDLPKDAEAEAKEDDAALIEFYSSFKDLFEFFCLNTTIHGTIRLVCSNSNKMKTAFWALLFLTSFAMLYWQFALIFNQ YWAYPVVMSMSVHSEPKMFPAVTLCTLNPYRISPVNQDIAKLDNLARETLYNLYGFHIPKSTLEDVSIDFYEEHPGKANR SKFHLDRNIALVKMGGKVGFRLCNTTGESCYNKVYISGVDAIQEWYRFHYMNIMSQIPSIIKMSPRDGHIKNLIYSCQYD GQPCRTSDHEHFHHPVYGSCFTLNKNGTDKFWKAFKPGIVYGLSLILKVDQKDHIPLLSTTAGVKVMIHRHNQTPFLEHE GFDIRPGIESTIGIKQDEVSRLGGSYGLCTNNGEDVNIKLLYNSTYTLQACLHSCFQHHMVEKCGCGYYFYPLPSGAEYC NYNKHPAWGHCFYLLYKKLTDHHLICFSECPKLCKETWFKLSAGYANWPSTKSEKWIHRALQADNRYNITTTKSKDIAKV NIFYEQLDYYSWDESPEYNVTLVMSNMGSQWSLWFGSSVLSVVEMFEFLVDVTILSLIFFYRRLTAKRRHKVSSPPKVPS VSLTLEKYRYIEEGLAPDQDAEKSQASHENPSFVHDEGLPPYSKYSKYQMPELYPRVVLHRFKHQEDQGTCQDPKS |
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