Gene
| Gene Model ID | habu1_s3726_g12528 |
|---|---|
| Locus | habu1_scaffold3726 : 214359 ... 216125 : - |
| To GenomeBrowser | habu1_scaffold3726:214359..216125 |
| Genes list of scaffold | habu1_scaffold3726 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| integrator complex subunit 11 | GO:0016180 GO:0032039 GO:0072562 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3726_g12528.t1 | 1 | 1 | RMMBL | 1 | 36 | 2.2e-13 | 49.7 | 2.5e-17 | 3.7e-13 | 49.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3726_g12528.t1 | gi|602666298|ref|XP_007438725.1| | PREDICTED: integrator complex subunit 11 [Python bivittatus] | 0.0 |
| habu1_s3726_g12528.t1 | gi|327288530|ref|XP_003228979.1| | PREDICTED: integrator complex subunit 11 [Anolis carolinensis] | 0.0 |
| habu1_s3726_g12528.t1 | gi|719744504|ref|XP_010210787.1| | PREDICTED: integrator complex subunit 11, partial [Tinamus guttatus] | 0.0 |
| habu1_s3726_g12528.t1 | gi|701294215|ref|XP_010023088.1| | PREDICTED: integrator complex subunit 11 [Nestor notabilis] | 0.0 |
| habu1_s3726_g12528.t1 | gi|557266963|ref|XP_006018877.1| | PREDICTED: integrator complex subunit 11 isoform X2 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.5 |
| Venom grand-1 | 3.1 |
| Pit, infrared sensing | 3.7 |
| Nose | 2.9 |
| Brain-1 | 2.2 |
| Eye | 2.7 |
| fetal fibroblast | 5.6 |
| venom gland-2 | 3.5 |
| Brain-2 | 3.1 |
| Spleen | 2.6 |
| Lung | 2.3 |
| Liver | 3.2 |
| Kidney | 2.0 |
| Pancreas | 2.7 |
| Small intestine | 1.8 |
| Large intestine | 3.0 |
| Stomach | 1.9 |
| heart | 1.5 |
| ovary | 2.7 |
| cheek muscle | 3.4 |
Transcript
| Transcript ID | habu1_s3726_g12528.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12528.t1 aatgtagctatttagcaagtggtctcagcacagttctgaactcgtatgctacatacaggggcatttttttaaaaaaaaaa atagagaaatattctaaatggcaccccataaatgaaggttgtcgtgcccaacctcaggcacttgagagggctgccatgct ttttattttttttgcctcctccactttactccccccccacagctggaagtcaagatgcaggtggagtacatgtccttcag cgcacacgccgacgccaagggcatcatgcagctgatccggcaagccgaaccccgcaacgtcctcctggtccatggcgagg ccaagaagatggagtttctgaagcagaaaatcgagcaggaattccgggtccagtgccacatgcctgccaatggggaaacg gtgtccattttcaccaatcctaacatcccggtggatatttctctcgggctactgaagagagagctggccattggcccctc gccggcctccaagaagccgaagctgttgcacggcactctgattatcaaggataacagtttccgcttggtttcttccgagc aagccctgaaggaattgggcctgggggagcaccagctgcgcttcacctgccggatccacttccaagacccccgcaaggaa cacgagaccggcctgcgcgtttacaaccacctgaaaaggtgagcgctcagggtagagcctgcacaggggcaggattggcg ggagccgctggggatcccaggcaatctgccccaccttgaggactagaaatttgcttcggttggacagggaaaactcacat ggacaggaatccccgctgaagcctgcttcaatgtcatgtcgcgttaaatgtacttaaaaatagaagagaaacggggttta attgaagcagtttatcttgggcattgtcttctcccagaactgattgccacagaagcttgtgagaagcacggacgctctct ggggtcctgtggaaaggctgggagggatccagcttggtggtgtttttctctctccccccccccccgcagcaccttgaagg attattccg |
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Protein
| Protein ID | habu1_s3726_g12528.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12528.t1 MQVEYMSFSAHADAKGIMQLIRQAEPRNVLLVHGEAKKMEFLKQKIEQEFRVQCHMPANGETVSIFTNPNIPVDISLGLL KRELAIGPSPASKKPKLLHGTLIIKDNSFRLVSSEQALKELGLGEHQLRFTCRIHFQDPRKEHETGLRVYNHLKR |
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