Gene
| Gene Model ID | habu1_s3726_g12530 |
|---|---|
| Locus | habu1_scaffold3726 : 224516 ... 226820 : + |
| To GenomeBrowser | habu1_scaffold3726:224516..226820 |
| Genes list of scaffold | habu1_scaffold3726 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ceramide-1-phosphate transfer protein | GO:0005737 GO:0017089 GO:0046836 GO:0051861 GO:1902387 GO:1902388 GO:1902389 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3726_g12530.t1 | 1 | 1 | GLTP | 26 | 177 | 0.0 | 156.4 | 0.0 | 0.0 | 156.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3726_g12530.t1 | gi|602666300|ref|XP_007438726.1| | PREDICTED: ceramide-1-phosphate transfer protein [Python bivittatus] | 0.0 |
| habu1_s3726_g12530.t1 | gi|327288528|ref|XP_003228978.1| | PREDICTED: ceramide-1-phosphate transfer protein [Anolis carolinensis] | 0.0 |
| habu1_s3726_g12530.t1 | gi|558180627|ref|XP_006127184.1| | PREDICTED: ceramide-1-phosphate transfer protein [Pelodiscus sinensis] | 0.0 |
| habu1_s3726_g12530.t1 | gi|564242085|ref|XP_006277850.1| | PREDICTED: ceramide-1-phosphate transfer protein [Alligator mississippiensis] | 0.0 |
| habu1_s3726_g12530.t1 | gi|557267012|ref|XP_006018900.1| | PREDICTED: ceramide-1-phosphate transfer protein, partial [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.1 |
| Venom grand-1 | 1.0 |
| Pit, infrared sensing | 1.6 |
| Nose | 5.2 |
| Brain-1 | 0.4 |
| Eye | 1.0 |
| fetal fibroblast | 1.1 |
| venom gland-2 | 1.2 |
| Brain-2 | 0.6 |
| Spleen | 0.4 |
| Lung | 1.3 |
| Liver | 0.0 |
| Kidney | 0.3 |
| Pancreas | 0.0 |
| Small intestine | 0.5 |
| Large intestine | 0.6 |
| Stomach | 0.4 |
| heart | 0.1 |
| ovary | 1.3 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s3726_g12530.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12530.t1 gagggccaggagtctcttttctagaccattaacgatcgatcgcagaaagatcttctaacctggaggttccccccgaggct ctttcccatctgcctggagtctcctccgctttccaagcttcaccatggctgacagcgaggacgttcacggcttgaatggg gtgctggtcaccttccagaggtgtctgaacagcaagggagaaatcctcatggacccgtatttaggaggctggaaaggact cgtcaggtttctaaacacgatggggccgatcttctccttcatttccaaagacgcggtgaccaaaatccagatcatggaga acttccgcagcagcgagcaacaggaggactacatcaccctccaagccatggtgaagtacgagctggccaacgggctggtg gacctgagggagcccggcgcttaccctgcctcaggctgccgaactatccttcgcctccaccgggccctgcactggctgca cctgtttctggagggcctgaggactagcggcccacgttccaagacgtcaacgctgtgcacagattcctacaatgcctccc tggctaactatcacccctggatcgtccgcaaggcagccaccatggccttctacgccttgcccacccgggacgccttcctg gagaacatggaagtgggcaccaccgaggaggccattgagatgctgggcgaggctctgcccagcatcagcagggtctacga tatcacggaaaacctctacgcagagcacaagctcctcgacctgccctgaggggacaggggccggcccaagagcggaagct cttcctgcggctgcagcccaggcctcctcaaaataatctcctgctctgctcaaccgggtttcttcttggaaagctccaag gccttcaagccatccctgtttgggtttctggccctgaagataaaaaaaagcttttatgccgtttcc |
|
Protein
| Protein ID | habu1_s3726_g12530.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12530.t1 MADSEDVHGLNGVLVTFQRCLNSKGEILMDPYLGGWKGLVRFLNTMGPIFSFISKDAVTKIQIMENFRSSEQQEDYITLQ AMVKYELANGLVDLREPGAYPASGCRTILRLHRALHWLHLFLEGLRTSGPRSKTSTLCTDSYNASLANYHPWIVRKAATM AFYALPTRDAFLENMEVGTTEEAIEMLGEALPSISRVYDITENLYAEHKLLDLP |
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