Gene
| Gene Model ID | habu1_s3726_g12531 |
|---|---|
| Locus | habu1_scaffold3726 : 227635 ... 270585 : - |
| To GenomeBrowser | habu1_scaffold3726:227635..270585 |
| Genes list of scaffold | habu1_scaffold3726 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| segment polarity protein dishevelled homolog dvl-1 | GO:0016055 GO:0035556 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3726_g12531.t3 | 1 | 1 | DIX | 1 | 83 | 4.8e-34 | 115.9 | 4.0e-37 | 8.4e-34 | 115.1 |
| habu1_s3726_g12531.t3 | 1 | 1 | Dishevelled | 144 | 218 | 4.4e-23 | 81.2 | 2.1e-26 | 4.4e-23 | 81.2 |
| habu1_s3726_g12531.t3 | 1 | 1 | PDZ | 255 | 338 | 6.6e-21 | 74.2 | 5.6e-24 | 1.2e-20 | 73.4 |
| habu1_s3726_g12531.t3 | 1 | 1 | DEP | 430 | 499 | 7.4e-17 | 60.8 | 1.1e-19 | 2.4e-16 | 59.2 |
| habu1_s3726_g12531.t3 | 1 | 1 | Dsh_C | 505 | 702 | 0.0 | 231.4 | 0.0 | 0.0 | 231.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3726_g12531.t3 | gi|591351610|ref|XP_007070255.1| | PREDICTED: segment polarity protein dishevelled homolog DVL-1 isoform X2 [Chelonia mydas] | 0.0 |
| habu1_s3726_g12531.t3 | gi|530598928|ref|XP_005292965.1| | PREDICTED: segment polarity protein dishevelled homolog DVL-1 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s3726_g12531.t3 | gi|591351608|ref|XP_007070254.1| | PREDICTED: segment polarity protein dishevelled homolog DVL-1 isoform X1 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.6 |
| Venom grand-1 | 17.1 |
| Pit, infrared sensing | 5.6 |
| Nose | 5.4 |
| Brain-1 | 7.2 |
| Eye | 6.1 |
| fetal fibroblast | 1.8 |
| venom gland-2 | 31.8 |
| Brain-2 | 5.7 |
| Spleen | 5.7 |
| Lung | 18.3 |
| Liver | 8.8 |
| Kidney | 17.0 |
| Pancreas | 9.7 |
| Small intestine | 6.6 |
| Large intestine | 6.3 |
| Stomach | 9.6 |
| heart | 8.4 |
| ovary | 1.3 |
| cheek muscle | 84.6 |
Transcript
| Transcript ID | habu1_s3726_g12531.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12531.t1 nnnnnnnnnnnnnnnnnnnnnnaaaaaaaaaaacgtagaagactccgagggactggcaccttgaacttggccttgattta tttcccccgcccctccttttctctcccttttccatcccctttctcgatcctttcaccccactccgctcctctctttacca aacctctacccttctccttctttttctccttcccctcttccctccccctcccttttccacccaccctccctcctttcctt cttccatggcggagacaaaaataatttaccatatcgatgaagaggagaccccttatttggtgaaattgcccgtttctccg gaaaaagtcactttggcggattttaaaaatgtcctcagcaaccggccggtgcatagctacaaatttttcttcaagtcgat ggaccaggattttggggtggtaaaggaagagatctcggatgacaacgcaaagctcccgtgtttcaacggacgtgtcgtgt cctggctggtcctggccgagagctcccattcagatggcggatcgcagtgcgcagaaagccacacggatcttcctcctccc cttgagcgaaccggaggcattggagactctcgcccgccttcctttcacccaaacgcctcaagcagccgagatgggctgga caacgaaacaggaaccgagtcagttgtcagccaccggcgggatcgtcaccggcggaggaaccgagaaggtcacgaagatg tctctcgcatcaatgggcatccgaaacttgaccgactctgggagcctccacccggttacgatacctcctccactgtgatg agcagcgaactcgaatccagcagctttgtagactcagaaaatgaggaaaacaccagcaggctgagtagctccacggagca gagcacgtcgtcccgtctgattcgcaagcacaagcgccggcgaaggaaacataaaatgcgacagatcgaccggtcgtcct ccttcagcagcatcaccgattccaccatgtccctcaacatcatcactgttacgctcaacatggaaaaatacaattttctg ggaataagcatcgtaggacagagcaacgacaggggagacggcggcatttacatcggctccatcatgaagggcggggcagt ggcggcggatgggcggattgagccaggcgacatgcttttacaggtgaatgaggtgaacttcgagaacatgagcaacgacg atgccgtgagagttttacgggaaattgtctccaagcccggacccatcagcctaacagtggccaaatgctgggatcctacc cccaggagttacttcacaatccccagggctgagccagtgcggccgatcgaccccgcagcctggatttctcataccacggc tttgacgggagcatacccccgttacggtatgagtccttccatgagcatcatcacttctaccagctcctcactaacaagct caattcccgattcggaaaagctggacgagacccccttgacggtgaaaagcgacatggccaccattgtcaaagtgatgcag ttaccagattcagggctggaaattcgggaccggatgtggttaaaaatcaccatctccaacgcagtgattggagcagatgt cgttgattggctttacgcccacgtggaggattttaaagaccgtcgagaagcccggaaatacgccagcagcatgctgaagc atggctacctcagacacactgtgaataagattactttctcagaacagtgctattatgtgtttggagatctttgtggcaat atggctgcaatgaacctcaacaacggttccagcggggcttctgaccaagacaccctgggccccctcccgcacccctccgc cccttggccactggggcaaggttatccttaccagtatcccctcgcccctccatgtttcccgccagcctaccaggaccccg gcttcagctatggcagtggaagtgcgggaagccagcacagcgaagttgtgaagctctggcagagtctggctggacagctc ggtagtgccaattctgaatgggaacagcccacccaagacgtagtctccaggccttctaaactgggaagacaagcagttgt gttgcagggctacggcaccattgaagatttcgtgtttgaatacaaagcctggaggtgatccccaaaggcaaggatacgga ttctccgcagctgtcagaacttcagaaaaagaacgcctctgcttcaagctgcagtagagaagtttatttcagactgagca atgcaagcgattgcatgctttctagttgctgagcgaggatgcaactgtcaagtaaccagcacatgggataaccaccagga tccctttccacacctccaaatctatccttgacaaaagagtcataaactgaagggagaggttggctaag |
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| Transcript ID | habu1_s3726_g12531.t2 |
| Definition | - |
>habu1_s3726_g12531.t2 nnnnnnnnnnnnnnnnnnnnnnaaaaaaaaaaacgtagaagactccgagggactggcaccttgaacttggccttgattta tttcccccgcccctccttttctctcccttttccatcccctttctcgatcctttcaccccactccgctcctctctttacca aacctctacccttctccttctttttctccttcccctcttccctccccctcccttttccacccaccctccctcctttcctt cttccatggcggagacaaaaataatttaccatatcgatgaagaggagaccccttatttggtgaaattgcccgtttctccg gaaaaagtcactttggcggattttaaaaatgtcctcagcaaccggccggtgcatagctacaaatttttcttcaagtcgat ggaccaggattttggggtggtaaaggaagagatctcggatgacaacgcaaagctcccgtgtttcaacggacgtgtcgtgt cctggctggtcctggccgagagctcccattcagatggcggatcgcagtgcgcagaaagccacacggatcttcctcctccc cttgagcgaaccggaggcattggagactctcgcccgccttcctttcacccaaacgcctcaagcagccgagatgggctgga caacgaaacaggaaccgagtcagttgtcagccaccggcgggatcgtcaccggcggaggaaccgagaaggtcacgaagatg tctctcgcatcaatgggcatccgaaacttgaccgactctgggagcctccacccggttacgatacctcctccactgtgatg agcagcgaactcgaatccagcagctttgtagactcagaaaatgaggaaaacaccagcaggctgagtagctccacggagca gagcacgtcgtcccgtctgattcgcaagcacaagcgccggcgaaggaaacataaaatgcgacagatcgaccggtcgtcct ccttcagcagcatcaccgattccaccatgtccctcaacatcatcactgttacgctcaacatggaaaaatacaattttctg ggaataagcatcgtaggacagagcaacgacaggggagacggcggcatttacatcggctccatcatgaagggcggggcagt ggcggcggatgggcggattgagccaggcgacatgcttttacaggtgaatgaggtgaacttcgagaacatgagcaacgacg atgccgtgagagttttacgggaaattgtctccaagcccggacccatcagcctaacagtggccaaatgctgggatcctacc cccaggagttacttcacaatccccagggctgagccagtgcggccgatcgaccccgcagcctggatttctcataccacggc tttgacgggagcatacccccgttacgagctggacgagacccccttgacggtgaaaagcgacatggccaccattgtcaaag tgatgcagttaccagattcagggctggaaattcgggaccggatgtggttaaaaatcaccatctccaacgcagtgattgga gcagatgtcgttgattggctttacgcccacgtggaggattttaaagaccgtcgagaagcccggaaatacgccagcagcat gctgaagcatggctacctcagacacactgtgaataagattactttctcagaacagtgctattatgtgtttggagatcttt gtggcaatatggctgcaatgaacctcaacaacggttccagcggggcttctgaccaagacaccctgggccccctcccgcac ccctccgccccttggccactggggcaaggttatccttaccagtatcccctcgcccctccatgtttcccgccagcctacca ggaccccggcttcagctatggcagtggaagtgcgggaagccagcacagcgaaggaagcaaaagtagcggctctaaccgaa gcaacagcgagaacagccggcggcgagagaaggaccgcaagtcagccggcggcggcagcagcagcgggtcggacccagcc acctggagcgggggtggggggagcgtcctgcggcacgagaggccccccagccaccttagccaccgcagccacgtctcggc caccctcagccagagaagtcctcgcagccaccactcttacggccccccgggagggctgccttctctggggaacttcgcca agctgggaggcaaagtctatgccatcaacgggccgcccggagggccccccgtccgggaacttggctccgtccctcctgaa ctgactgggagccgccagtccttccagaaagccatgggcaacccgtgcgaattcttcgtggacatcatgtgaaaagaagt gccttcctagagagtccgcgcagagggttcctgttctgtcagcagactggcctgggacctttttttttctttctttcttt caaagcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagtgcaatttta ctgtgttctccttgacttaaccaagggatcgtattttatataatagttttaaaaaaaaaaaagacaaaagcaacacggca attctccagtcctgcatattttgcacctttaaaaaaaaatattctggttcctttctttccagtctgggggaaataaaaac ttacaatgaggaggatttgctttgataaagacaacacaactaaccagggacaataaagttgggtttcatttgttgaacc |
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| Transcript ID | habu1_s3726_g12531.t3 |
| Definition | - |
>habu1_s3726_g12531.t3 nnnnnnnnnnnnnnnnnnnnnnaaaaaaaaaaacgtagaagactccgagggactggcaccttgaacttggccttgattta tttcccccgcccctccttttctctcccttttccatcccctttctcgatcctttcaccccactccgctcctctctttacca aacctctacccttctccttctttttctccttcccctcttccctccccctcccttttccacccaccctccctcctttcctt cttccatggcggagacaaaaataatttaccatatcgatgaagaggagaccccttatttggtgaaattgcccgtttctccg gaaaaagtcactttggcggattttaaaaatgtcctcagcaaccggccggtgcatagctacaaatttttcttcaagtcgat ggaccaggattttggggtggtaaaggaagagatctcggatgacaacgcaaagctcccgtgtttcaacggacgtgtcgtgt cctggctggtcctggccgagagctcccattcagatggcggatcgcagtgcgcagaaagccacacggatcttcctcctccc cttgagcgaaccggaggcattggagactctcgcccgccttcctttcacccaaacgcctcaagcagccgagatgggctgga caacgaaacaggaaccgagtcagttgtcagccaccggcgggatcgtcaccggcggaggaaccgagaaggtcacgaagatg tctctcgcatcaatgggcatccgaaacttgaccgactctgggagcctccacccggttacgatacctcctccactgtgatg agcagcgaactcgaatccagcagctttgtagactcagaaaatgaggaaaacaccagcaggctgagtagctccacggagca gagcacgtcgtcccgtctgattcgcaagcacaagcgccggcgaaggaaacataaaatgcgacagatcgaccggtcgtcct ccttcagcagcatcaccgattccaccatgtccctcaacatcatcactgttacgctcaacatggaaaaatacaattttctg ggaataagcatcgtaggacagagcaacgacaggggagacggcggcatttacatcggctccatcatgaagggcggggcagt ggcggcggatgggcggattgagccaggcgacatgcttttacaggtgaatgaggtgaacttcgagaacatgagcaacgacg atgccgtgagagttttacgggaaattgtctccaagcccggacccatcagcctaacagtggccaaatgctgggatcctacc cccaggagttacttcacaatccccagggctgagccagtgcggccgatcgaccccgcagcctggatttctcataccacggc tttgacgggagcatacccccgttacggtatgagtccttccatgagcatcatcacttctaccagctcctcactaacaagct caattcccgattcggaaaagctggacgagacccccttgacggtgaaaagcgacatggccaccattgtcaaagtgatgcag ttaccagattcagggctggaaattcgggaccggatgtggttaaaaatcaccatctccaacgcagtgattggagcagatgt cgttgattggctttacgcccacgtggaggattttaaagaccgtcgagaagcccggaaatacgccagcagcatgctgaagc atggctacctcagacacactgtgaataagattactttctcagaacagtgctattatgtgtttggagatctttgtggcaat atggctgcaatgaacctcaacaacggttccagcggggcttctgaccaagacaccctgggccccctcccgcacccctccgc cccttggccactggggcaaggttatccttaccagtatcccctcgcccctccatgtttcccgccagcctaccaggaccccg gcttcagctatggcagtggaagtgcgggaagccagcacagcgaaggaagcaaaagtagcggctctaaccgaagcaacagc gagaacagccggcggcgagagaaggaccgcaagtcagccggcggcggcagcagcagcgggtcggacccagccacctggag cgggggtggggggagcgtcctgcggcacgagaggccccccagccaccttagccaccgcagccacgtctcggccaccctca gccagagaagtcctcgcagccaccactcttacggccccccgggagggctgccttctctggggaacttcgccaagctggga ggcaaagtctatgccatcaacgggccgcccggagggccccccgtccgggaacttggctccgtccctcctgaactgactgg gagccgccagtccttccagaaagccatgggcaacccgtgcgaattcttcgtggacatcatgtgaaaagaagtgccttcct agagagtccgcgcagagggttcctgttctgtcagcagactggcctgggacctttttttttctttctttctttcaaagcan nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagtgcaattttactgtgttc tccttgacttaaccaagggatcgtattttatataatagttttaaaaaaaaaaaagacaaaagcaacacggcaattctcca gtcctgcatattttgcacctttaaaaaaaaatattctggttcctttctttccagtctgggggaaataaaaacttacaatg aggaggatttgctttgataaagacaacacaactaaccagggacaataaagttgggtttcatttgttgaacc |
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Protein
| Protein ID | habu1_s3726_g12531.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12531.t1 MAETKIIYHIDEEETPYLVKLPVSPEKVTLADFKNVLSNRPVHSYKFFFKSMDQDFGVVKEEISDDNAKLPCFNGRVVSW LVLAESSHSDGGSQCAESHTDLPPPLERTGGIGDSRPPSFHPNASSSRDGLDNETGTESVVSHRRDRHRRRNREGHEDVS RINGHPKLDRLWEPPPGYDTSSTVMSSELESSSFVDSENEENTSRLSSSTEQSTSSRLIRKHKRRRRKHKMRQIDRSSSF SSITDSTMSLNIITVTLNMEKYNFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNEVNFENMSNDDA VRVLREIVSKPGPISLTVAKCWDPTPRSYFTIPRAEPVRPIDPAAWISHTTALTGAYPRYGMSPSMSIITSTSSSLTSSI PDSEKLDETPLTVKSDMATIVKVMQLPDSGLEIRDRMWLKITISNAVIGADVVDWLYAHVEDFKDRREARKYASSMLKHG YLRHTVNKITFSEQCYYVFGDLCGNMAAMNLNNGSSGASDQDTLGPLPHPSAPWPLGQGYPYQYPLAPPCFPPAYQDPGF SYGSGSAGSQHSEVVKLWQSLAGQLGSANSEWEQPTQDVVSRPSKLGRQAVVLQGYGTIEDFVFEYKAWR |
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| Protein ID | habu1_s3726_g12531.t2 |
| Definition | - |
>habu1_s3726_g12531.t2 MAETKIIYHIDEEETPYLVKLPVSPEKVTLADFKNVLSNRPVHSYKFFFKSMDQDFGVVKEEISDDNAKLPCFNGRVVSW LVLAESSHSDGGSQCAESHTDLPPPLERTGGIGDSRPPSFHPNASSSRDGLDNETGTESVVSHRRDRHRRRNREGHEDVS RINGHPKLDRLWEPPPGYDTSSTVMSSELESSSFVDSENEENTSRLSSSTEQSTSSRLIRKHKRRRRKHKMRQIDRSSSF SSITDSTMSLNIITVTLNMEKYNFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNEVNFENMSNDDA VRVLREIVSKPGPISLTVAKCWDPTPRSYFTIPRAEPVRPIDPAAWISHTTALTGAYPRYELDETPLTVKSDMATIVKVM QLPDSGLEIRDRMWLKITISNAVIGADVVDWLYAHVEDFKDRREARKYASSMLKHGYLRHTVNKITFSEQCYYVFGDLCG NMAAMNLNNGSSGASDQDTLGPLPHPSAPWPLGQGYPYQYPLAPPCFPPAYQDPGFSYGSGSAGSQHSEGSKSSGSNRSN SENSRRREKDRKSAGGGSSSGSDPATWSGGGGSVLRHERPPSHLSHRSHVSATLSQRSPRSHHSYGPPGGLPSLGNFAKL GGKVYAINGPPGGPPVRELGSVPPELTGSRQSFQKAMGNPCEFFVDIM |
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| Protein ID | habu1_s3726_g12531.t3 |
| Definition | - |
>habu1_s3726_g12531.t3 MAETKIIYHIDEEETPYLVKLPVSPEKVTLADFKNVLSNRPVHSYKFFFKSMDQDFGVVKEEISDDNAKLPCFNGRVVSW LVLAESSHSDGGSQCAESHTDLPPPLERTGGIGDSRPPSFHPNASSSRDGLDNETGTESVVSHRRDRHRRRNREGHEDVS RINGHPKLDRLWEPPPGYDTSSTVMSSELESSSFVDSENEENTSRLSSSTEQSTSSRLIRKHKRRRRKHKMRQIDRSSSF SSITDSTMSLNIITVTLNMEKYNFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNEVNFENMSNDDA VRVLREIVSKPGPISLTVAKCWDPTPRSYFTIPRAEPVRPIDPAAWISHTTALTGAYPRYGMSPSMSIITSTSSSLTSSI PDSEKLDETPLTVKSDMATIVKVMQLPDSGLEIRDRMWLKITISNAVIGADVVDWLYAHVEDFKDRREARKYASSMLKHG YLRHTVNKITFSEQCYYVFGDLCGNMAAMNLNNGSSGASDQDTLGPLPHPSAPWPLGQGYPYQYPLAPPCFPPAYQDPGF SYGSGSAGSQHSEGSKSSGSNRSNSENSRRREKDRKSAGGGSSSGSDPATWSGGGGSVLRHERPPSHLSHRSHVSATLSQ RSPRSHHSYGPPGGLPSLGNFAKLGGKVYAINGPPGGPPVRELGSVPPELTGSRQSFQKAMGNPCEFFVDIM |
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