Gene
| Gene Model ID | habu1_s3726_g12537 |
|---|---|
| Locus | habu1_scaffold3726 : 387766 ... 403948 : + |
| To GenomeBrowser | habu1_scaffold3726:387766..403948 |
| Genes list of scaffold | habu1_scaffold3726 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| von willebrand factor a domain-containing protein 1 | GO:0005604 GO:0005614 GO:0005615 GO:0030198 GO:0042802 GO:0048266 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3726_g12537.t1 | 1 | 1 | VWA | 5 | 160 | 6.5e-30 | 104.1 | 2.9e-33 | 1.1e-29 | 103.4 |
| habu1_s3726_g12537.t1 | 1 | 1 | VWA_2 | 5 | 184 | 3.8e-11 | 43.4 | 1.8e-14 | 6.7e-11 | 42.5 |
| habu1_s3726_g12537.t1 | 3 | 1 | fn3 | 181 | 246 | 1.6e-29 | 101.8 | 1.6e-10 | 5.9e-07 | 29.5 |
| habu1_s3726_g12537.t1 | 3 | 2 | fn3 | 271 | 344 | 1.6e-29 | 101.8 | 1.5e-11 | 5.7e-08 | 32.7 |
| habu1_s3726_g12537.t1 | 3 | 3 | fn3 | 360 | 433 | 1.6e-29 | 101.8 | 9.3e-13 | 3.4e-09 | 36.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3726_g12537.t1 | gi|602646969|ref|XP_007429914.1| | PREDICTED: von Willebrand factor A domain-containing protein 1 [Python bivittatus] | 0.0 |
| habu1_s3726_g12537.t1 | gi|558169546|ref|XP_006124724.1| | PREDICTED: von Willebrand factor A domain-containing protein 1 [Pelodiscus sinensis] | 0.0 |
| habu1_s3726_g12537.t1 | gi|641759227|ref|XP_008165510.1| | PREDICTED: von Willebrand factor A domain-containing protein 1 [Chrysemys picta bellii] | 0.0 |
| habu1_s3726_g12537.t1 | gi|557266969|ref|XP_006018880.1| | PREDICTED: von Willebrand factor A domain-containing protein 1 [Alligator sinensis] | 0.0 |
| habu1_s3726_g12537.t1 | gi|704172610|ref|XP_010132366.1| | PREDICTED: von Willebrand factor A domain-containing protein 1-like [Buceros rhinoceros silvestris] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.9 |
| Venom grand-1 | 10.4 |
| Pit, infrared sensing | 8.3 |
| Nose | 4.4 |
| Brain-1 | 3.1 |
| Eye | 6.5 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 3.1 |
| Brain-2 | 2.8 |
| Spleen | 8.1 |
| Lung | 9.5 |
| Liver | 0.5 |
| Kidney | 9.3 |
| Pancreas | 1.6 |
| Small intestine | 1.2 |
| Large intestine | 6.1 |
| Stomach | 2.8 |
| heart | 1.8 |
| ovary | 0.6 |
| cheek muscle | 42.7 |
Transcript
| Transcript ID | habu1_s3726_g12537.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12537.t1 attgcttcggattctctgcctgctcggtggtgtcctggcccaaagtccttcaagagggtgctcatcagtgttggctgggg aagacaggagatgtcacgacgctccggcagcgtctcctactacgaattctccaggatcaaagagttccttgctgaactgc tcctcccgtttaccttcggccctgacaatgtccggactggcattgtccacatcagcaccacgcccatcctggagttcccc tttgaccggcatttctccacccaggccgtccagcacgctatccgcaacatccagcaggtgatgggggacaccaataccgg caaaagcatttcctttgccaaggagaagctcttcaccgccgaagcgggggcccgtcctgacgtccccaaagtgctggtgt gggtgaccgacggcttctccaaggacgacgtggcccagccgatgcagcttctgaaagacctgggggtcgccgtcttcatt gtcagcacgggcaggggaaactacctggagctctcggctgctgccagccctcccccggagaagcatctccactttgtcga cgtggatgacttaggcctcatcaccaaggagctgcaggactccattgcagccgccatccaagccaagtgcctgagagcca cagacatctcctcaagcagcttccgcctcacgtggccccagctcctgacacgggacaccggctactacattttggagtat gccccgagtggccaaccccggcggaaggtgaccagacaactcactggtgaccacaccagcactgtggtgacacagctaga ctcagaaaccacctatgaggttgctctcatcccagaatccaacgagaaatacatcccgccacaaaccaccagggtcacca cgctggaagaggtggtcagcccagcccagattctgatctcggagtccaaaccccacagcatccgggtcagctggtctccc atcctagagagcgtggctgcctatcaagtcatgtatggtcccttgaatgacaatttggtccagctgcaagaggtggacgg caggctgaatagcaccgtcctggaaaatcttctggctaacaccagctacttggtgacggtgtctgccatttacaaatctg gcaaggagaaagccctctccgctaaagcctgcacgcgggaagaatactccaaaataaagcacctccactttaaagatctg agccccagctctgtaaaggcctcctgggatccagcagaaggagacgtgttgggctaccgcgttctgtgtcggcggcaagc cggcccttcgaccctcctcagtgtctcaccgcagatccacagcgttttgctgtcagatctgatccccggcagcaccaaca aagtgtgtgtgaagcctgtgtacaaaacccaggctgggaaaaaactgtgtcgagtgatccatcggcagcctgcttcagcc gcaggtcgctacaggcaccggcagagagcgtgagagtttgcgaacgaactttttgtgggtcaaaagg |
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Protein
| Protein ID | habu1_s3726_g12537.t1 |
|---|---|
| Definition | - |
>habu1_s3726_g12537.t1 MSRRSGSVSYYEFSRIKEFLAELLLPFTFGPDNVRTGIVHISTTPILEFPFDRHFSTQAVQHAIRNIQQVMGDTNTGKSI SFAKEKLFTAEAGARPDVPKVLVWVTDGFSKDDVAQPMQLLKDLGVAVFIVSTGRGNYLELSAAASPPPEKHLHFVDVDD LGLITKELQDSIAAAIQAKCLRATDISSSSFRLTWPQLLTRDTGYYILEYAPSGQPRRKVTRQLTGDHTSTVVTQLDSET TYEVALIPESNEKYIPPQTTRVTTLEEVVSPAQILISESKPHSIRVSWSPILESVAAYQVMYGPLNDNLVQLQEVDGRLN STVLENLLANTSYLVTVSAIYKSGKEKALSAKACTREEYSKIKHLHFKDLSPSSVKASWDPAEGDVLGYRVLCRRQAGPS TLLSVSPQIHSVLLSDLIPGSTNKVCVKPVYKTQAGKKLCRVIHRQPASAAGRYRHRQRA |
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